Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sojae_20[genbank_20GCA_5F000149755.2_202011-10-03] 82 sequences; 82,597,641 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq7 102 7e-17 >seq7 Length=4006126 Score = 102 bits (112), Expect = 7e-17 Identities = 286/433 (66%), Gaps = 7/433 (2%) Strand=Plus/Minus Query 122916 CAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGACATCGAAAACGCGACC 122975 || || ||| | |||||||| || | ||| | ||| ||||||| | ||| | Sbjct 2440648 CAGCAGATGATTATGCGCGTGGCGCTGGGCATCCACAAGAGCGACATTAAGGCCGCCCTC 2440589 Query 122976 GAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGTCCCACTTTGTTCGCC 123035 || || ||||| | ||||| ||||| |||||||||||||||| || || |||| | Sbjct 2440588 GAGACGTACGAGCTCATGTCGCAAAAGTTTTTCACGCACGCGACCCCGACACTGTTTAAC 2440529 Query 123036 GCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACAGC 123095 ||||||||| | || || |||| || || || || | || ||| || ||| | Sbjct 2440528 GCCGGCACGCCGCGCCCACAACTGTCGTCCTGCTTCCTGTTGGCCATGCAGGACGACTCC 2440469 Query 123096 ATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCCAAATTTGGCGGCGGC 123155 || || ||||| || || | | ||||||| || || || | | ||| || Sbjct 2440468 ATTGAGGGCATCTACGACACGCTCAAGCAGTGCGCGTGCATCTCTAAGTGGGCCGGAGGT 2440409 Query 123156 ATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGA-AGCCGCATCAGAAGCACCGACGG 123214 || ||| | | | ||||| || | | ||| || | ||| |||| | |||| |||| Sbjct 2440408 ATCGGCATCAGCATGCACAACATCCG-CGCCACGAATAGCTACATCCGTGGCACGAACGG 2440350 Query 123215 AATCG-CCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCG 123273 ||| || || || |||||||||| || | ||| || | | || |||| | Sbjct 2440349 -CTCGTCCAATGGCATCATCCCCATGCTGCGCGTGTTCAACGACACGGCCCGCTACGTGG 2440291 Query 123274 ACCAGGGC---GGCAAACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTG 123330 |||||||| ||||| ||||| ||| || | || ||||| || || || ||||||| | Sbjct 2440290 ACCAGGGCGGAGGCAAGCGCAAGGGCTCGTTCGCCATCTACCTTGAGCCCTGGCACGCGG 2440231 Query 123331 ATGTGTACGATTT 123343 | |||| ||| || Sbjct 2440230 ACGTGTTCGAGTT 2440218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002736696720