Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sojae_20[genbank_20GCA_5F000149755.2_202011-10-03] 82 sequences; 82,597,641 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq1 113 4e-20 >seq1 Length=13391543 Score = 113 bits (124), Expect = 4e-20 Identities = 185/265 (70%), Gaps = 4/265 (2%) Strand=Plus/Plus Query 5256 CACGCCCGTGGACCCGAATCCCGAGGAGCCGCGCGTCGTGGAGGGCATGCCCTCCACCTC 5315 |||||||||| ||||| || || |||||||| |||| || | |||||||| Sbjct 323157 CACGCCCGTGCTGCCGAAGCCGCCGGCGCCGCGCGCCGTGTCCTCGATCTCGTCCACCTC 323216 Query 5316 CATGATGCACGGTCGGCAGAAGCACTCGCAGATGAGCTGCGCCACGCGGTCGCCTCGCCG 5375 | ||| ||| || |||| |||||||||||||||||||||||| ||| Sbjct 323217 CTGGATCTCCGGGTACTCGATCTTCTCGAGGATGAGCTGCGCCACGCGGTCGCCGCGCTT 323276 Query 5376 CACCACGAAGGTCTCTTGGCCGAA--GTTGAAGAGCACCACTCCCAGGTTCCCTCGGAAG 5433 || |||| ||| ||||| |||||| || | ||| |||| ||| || ||| || Sbjct 323277 GACGGGGAAGTCCTC--GGCCGCGTGGTTGAACAGGATCACGCCCACGTTGCCGCGGTAG 323334 Query 5434 TCCGGGTCCACGACGCCCGCTCCCACATCCACGAAGTTGTTTACCGCGAGACCGGACCTC 5493 || | ||| | ||||| || ||| || | ||| || || | |||||| ||||| | Sbjct 323335 TCGGCGTCGATCACGCCGGCGCCCGTGTCGATGAACTTCTTGAGCGCGAGGCCGGAGCGA 323394 Query 5494 GGCGCCACGCGACCGTAGCAGCCGT 5518 ||||||||||| |||||||||||| Sbjct 323395 GGCGCCACGCGCGCGTAGCAGCCGT 323419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447810740993520