Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sojae_20[genbank_20GCA_5F000149755.2_202011-10-03] 82 sequences; 82,597,641 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2 295 8e-75 >seq2 Length=11587142 Score = 295 bits (326), Expect = 8e-75 Identities = 471/660 (71%), Gaps = 17/660 (3%) Strand=Plus/Plus Query 146920 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCC 146979 || ||||| |||||||| || || ||||| || || || | ||| ||||| || || Sbjct 8407818 AGCGGCTCGACGTGGTTCAGATACACGTGGGCATCGCCAATAACGTGGACAAACTCACCA 8407877 Query 146980 GGCTTAAGGCCGGTCACGTGGGCCACCATGTAG-GTGAGCAGCGAGTAGCTGGCTATGTT 147038 ||||| | || ||||| || ||||||| || | || |||| || ||||||||| || || Sbjct 8407878 GGCTTCAACCCCGTCACCTGCGCCACCA-GTCGCGTCAGCAACGCGTAGCTGGCGATATT 8407936 Query 147039 GAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCC 147098 ||| || || || || |||||||| |||| | |||||||| ||| || || | ||| || Sbjct 8407937 GAACGGCACGCCAAGTCCCATGTCGGCCGAGCGCTGGTACATCTGACAGGACAACTCGCC 8407996 Query 147099 GTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTC 147158 ||| |||||||| |||||||| | |||||||||||||| |||||||| || || || Sbjct 8407997 GTCAGCCACGTAGAACTGGCAGAACATGTGGCACGGCGGGAGCGCCATTTCGTTGAGATC 8408056 Query 147159 CGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTG-CTCTCGGGGTTCCTCTTAATCTCTT 147217 ||| |||||||| ||||| | ||| | ||| | | | || |||||| | | || | Sbjct 8408057 CGCCGGGTTCCACGCCGACAGCACGATCCGTCGGTCGGTC-GGGTTCGTGCGCAGCTTGT 8408115 Query 147218 CGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACG 147276 |||||| | |||||||||||||||||| | |||| | | | ||| |||| | Sbjct 8408116 GAATAACCTCCGCGAGCTGGTCCACGCCCTGGTTCGTGTAG-TCGGCATGCATGTCCGTG 8408174 Query 147277 TACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTT 147336 ||| ||||||||||||||| ||||||||||||||| || || || || ||||| || Sbjct 8408175 TACTTGGCCCCAAAGTGCCGCCACTGGAAGCCGTAGACCGGTCCGAGATCGCC--CACTT 8408232 Query 147337 CTGTGCGA--GAAGCCCGC-CCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATG 147393 || |||| | || || | | | ||| |||| | || || | | ||||||||||| Sbjct 8408233 CT-CGCGATTGCAGTCCACGACTGTCCAGATACTCCCGCGATCCATTGCCGTCCCAGATG 8408291 Query 147394 CCCA-CTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAG 147452 | ||| | || | ||| | | |||| || | ||||||||| ||||| Sbjct 8408292 TGGATGTCCTTCTGCTG-CAGCGTGTGCGCACTCGTGTCTCCACTGATGAACCACAGCAG 8408350 Query 147453 CTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAAC---TGGTC 147509 ||||||| || || | ||| || || | |||||| || ||||| |||||| | ||| Sbjct 8408351 CTCCTCCGCCACGCCGCGCCAGAACACGCGCTTGGTCGTGAGCAGTGGGAACACGTTGTC 8408410 Query 147510 CCTCAGCGAATACCTCGCCTGGTCCCCAAACACAGACAGCGTGCCCGTGCCCGTCCTGTC 147569 |||||| ||| | ||| | ||||| || ||||||||||| || ||||||| ||| Sbjct 8408411 CCTCAGACTGAACCGCATCTGCGCGCCAAAGACCGACAGCGTGCCTGTTCCCGTCCGGTC 8408470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487401924800