Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sojae_20[genbank_20GCA_5F000149755.2_202011-10-03] 82 sequences; 82,597,641 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 7e-11 >seq1 Length=13391543 Score = 84.2 bits (92), Expect = 7e-11 Identities = 100/135 (74%), Gaps = 3/135 (2%) Strand=Plus/Plus Query 443763 CTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACT 443822 ||||||||||||| | || ||||| || || |||| ||||||| ||| ||||| || Sbjct 5642047 CTCCATCTTCTGGCTCAAGAAGCGCGGCCTGATGCCTGGTCTGAGCTTCTCGAACGAGCT 5642106 Query 443823 GATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCAAACACAT 443882 |||||| || || ||||| |||| |||||||| || || | ||| |||| | | Sbjct 5642107 GATCAGCCGCGATGAGGGCATGCACACGGACTTCGCTTGCCTCATGTACTCCAAGC---T 5642163 Query 443883 CGTGCACAAGCTGCC 443897 ||| |||||||||| Sbjct 5642164 GGTGAACAAGCTGCC 5642178 Score = 84.2 bits (92), Expect = 7e-11 Identities = 100/135 (74%), Gaps = 3/135 (2%) Strand=Plus/Minus Query 443763 CTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACT 443822 ||||||||||||| | || ||||| || || |||| ||||||| ||| ||||| || Sbjct 5643913 CTCCATCTTCTGGCTCAAGAAGCGCGGCCTGATGCCTGGTCTGAGCTTCTCGAACGAGCT 5643854 Query 443823 GATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCAAACACAT 443882 |||||| || || ||||| |||| |||||||| || || | ||| |||| | | Sbjct 5643853 GATCAGCCGCGATGAGGGCATGCACACGGACTTCGCTTGCCTCATGTACTCCAAGC---T 5643797 Query 443883 CGTGCACAAGCTGCC 443897 ||| |||||||||| Sbjct 5643796 GGTGAACAAGCTGCC 5643782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588334331254490