Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sojae_20[genbank_20GCA_5F000149755.2_202011-10-03] 82 sequences; 82,597,641 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq2 262 4e-65 >seq2 Length=11587142 Score = 262 bits (290), Expect = 4e-65 Identities = 476/694 (69%), Gaps = 7/694 (1%) Strand=Plus/Plus Query 6506 GGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAG 6565 ||||| || || ||| ||| ||||| || ||||| |||||| ||||||||| || Sbjct 8407782 GGGAATGGGCGCGGCATTCGCGTAAGCTGCTTCTGGAGCGGCTCGACGTGGTTCAGATAC 8407841 Query 6566 ATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCCCACGACATGAG 6623 | || ||||| || | |||| | || | ||| ||||| ||||||| || || | Sbjct 8407842 ACGTGGGCATCGCCAATAACGT--GGACAAACTCACCAGGCTTCAACCCCGTCACCTGCG 8407899 Query 6624 CGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGT 6683 | | || ||| |||| ||||| || || || ||||||||||| || | ||||||| Sbjct 8407900 CCACCAGTCGCGTCAGCAACGCGTAGCTGGCGATATTGAACGGCACGCCAAGTCCCATGT 8407959 Query 6684 CTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGGCAGA 6743 | |||| || || || | ||| ||||||| ||| || | || |||||||| ||||||| Sbjct 8407960 CGGCCGAGCGCTGGTACATCTGACAGGACAACTCGCCGTCAGCCACGTAGAACTGGCAGA 8408019 Query 6744 GGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCA 6803 |||||||||| ||||||||||| ||||||| |||||||||||| ||| || Sbjct 8408020 ACATGTGGCACGGCGGGAGCGCCATTTCGTTGAGATCCGCCGGGTTCCACGCCGACAGCA 8408079 Query 6804 CGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCG 6863 |||||| || ||| |||||| || ||| || || | | ||||||||| Sbjct 8408080 CGATCCGTCGGTCGGTCGGGTTCGTGCGCAGCTTGTGAATAACCTCCGCGAGCTGGTCCA 8408139 Query 6864 CTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACT 6923 | ||||| || ||||| || | | || |||| ||||||||||| | ||||| Sbjct 8408140 CGCCCTGGTTCGTGTAGTCGGCATGCATGTCCGTGTACTTGGCCCCAAAGTGCCGCCACT 8408199 Query 6924 GGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCCGCTTGTCCA 6983 |||| ||||||||||| || | |||||| | || || ||| | | || || |||||| Sbjct 8408200 GGAAGCCGTAGACCGGTCCGAGATCGCCCACTTCTCGCGATTGCAGTCCACGACTGTCCA 8408259 Query 6984 GAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGCTCCTTGG 7043 || | || || || || | |||||||||| | | || | ||| | | Sbjct 8408260 GATACTCCCGCGATCCATTGCCGTCCCAGATGTGGATGTCCTTCTGCTGCAGCGTGTGCG 8408319 Query 7044 TGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTACACAC 7103 ||||| | || || | |||||||||||||||||| ||||||| |||| |||| | Sbjct 8408320 CACTCGTGTCTCCACTGATGAACCACAGCAGCTCCTCCGCCACGCCGCGCCAGAACACGC 8408379 Query 7104 GTTTCGTCGTCAGCAGCGGAAA---TTCGCCCCGAAGGTTGTATCGGGCCTGTGTGCCGA 7160 | || ||||| ||||| || || | | ||| || || | || ||| | ||| | Sbjct 8408380 GCTTGGTCGTGAGCAGTGGGAACACGTTGTCCCTCAGACTGAACCGCATCTGCGCGCCAA 8408439 Query 7161 ACACGGAGAGGGTCCCCGTCCCGGTCCGGTCCCC 7194 | || || || || || || || |||||||| || Sbjct 8408440 AGACCGACAGCGTGCCTGTTCCCGTCCGGTCTCC 8408473 Score = 262 bits (290), Expect = 4e-65 Identities = 476/694 (69%), Gaps = 7/694 (1%) Strand=Plus/Minus Query 34151 GGGGACCGGACCGGGACGGGGACCCTCTCCGTGTTCGGCACACAGGCCCGATACAACCTT 34210 || |||||||| || || || || || || || || ||| | ||| || | || || Sbjct 8408473 GGAGACCGGACGGGAACAGGCACGCTGTCGGTCTTTGGCGCGCAGATGCGGTTCAGTCTG 8408414 Query 34211 CGGGGCGAA---TTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAG 34267 ||| | | || || ||||| ||||| || || |||| |||| ||||||| ||| Sbjct 8408413 AGGGACAACGTGTTCCCACTGCTCACGACCAAGCGCGTGTTCTGGCGCGGCGTGGCGGAG 8408354 Query 34268 GAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTG 34327 ||||||||||||||| | || || | ||||| | | ||| | || | Sbjct 8408353 GAGCTGCTGTGGTTCATCAGTGGAGACACGAGTGCGCACACGCTGCAGCAGAAGGACATC 8408294 Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGG 34387 | |||||||||| | || || || || | |||||||| || || | | ||| || Sbjct 8408293 CACATCTGGGACGGCAATGGATCGCGGGAGTATCTGGACAGTCGTGGACTGCAATCGCGA 8408234 Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTAT 34447 || | |||||| | || ||||||||||| ||||||||| | ||||||||||| |||| Sbjct 8408233 GAAGTGGGCGATCTCGGACCGGTCTACGGCTTCCAGTGGCGGCACTTTGGGGCCAAGTAC 8408174 Query 34448 CGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGAC 34507 || | | || ||||| || ||||| | ||||||||| | | || || || Sbjct 8408173 ACGGACATGCATGCCGACTACACGAACCAGGGCGTGGACCAGCTCGCGGAGGTTATTCAC 8408114 Query 34508 ACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGAT 34567 | || |||||| ||| || |||||||| ||| |||||||||||| |||| Sbjct 8408113 AAGCTGCGCACGAACCCGACCGACCGACGGATCGTGCTGTCGGCGTGGAACCCGGCGGAT 8408054 Query 34568 CTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGG 34627 ||| ||||||||||| |||||||||| ||||||| |||||||| || | || Sbjct 8408053 CTCAACGAAATGGCGCTCCCGCCGTGCCACATGTTCTGCCAGTTCTACGTGGCTGACGGC 8407994 Query 34628 GAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAAC 34687 ||| ||||||| ||| | || || || |||| |||||||| | || ||||||||||| Sbjct 8407993 GAGTTGTCCTGTCAGATGTACCAGCGCTCGGCCGACATGGGACTTGGCGTGCCGTTCAAT 8407934 Query 34688 ATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGG 34747 || || || ||||| |||| ||| || | || || || ||||||| ||||| Sbjct 8407933 ATCGCCAGCTACGCGTTGCTGACGCGACTGGTGGCGCAGGTGACGGGGTTGAAGCCTGGT 8407874 Query 34748 GAGCTGGTGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCC 34805 ||| | || | |||| | || ||||| || | || ||||||||| |||||| ||||| Sbjct 8407873 GAGTTTGTCC--ACGTTATTGGCGATGCCCACGTGTATCTGAACCACGTCGAGCCGCTCC 8407816 Query 34806 GGATCCAGCTGCAACGAGAGCCCCGACCGTTCCC 34839 || ||||| ||| ||| || || ||||| Sbjct 8407815 AGAAGCAGCTTACGCGAATGCCGCGCCCATTCCC 8407782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261940531040