Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sojae_20[genbank_20GCA_5F000149755.2_202011-10-03] 82 sequences; 82,597,641 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq2 187 2e-42 >seq2 Length=11587142 Score = 187 bits (206), Expect = 2e-42 Identities = 451/676 (67%), Gaps = 19/676 (3%) Strand=Plus/Plus Query 27130 AGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGG 27189 ||||| ||| ||||| || ||||| | ||| || ||||| || || || | |||| Sbjct 8407806 AGCTGCTTCTGGAGCGGCTCGACGTGGTTCAGATACACGTGGGCATCGCCAATAACGTGG 8407865 Query 27190 ACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAG 27249 |||||||| || || | | ||| || || || |||| || ||| || | | |||| Sbjct 8407866 ACAAACTCACCAGGCTTCAACCCCGTCACCTGCGCCACCAGTCGCGTCAGCAACGCGTAG 8407925 Query 27250 CTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACAC 27309 |||||||| || || || || || || |||||||| |||| | |||||| | |||||| Sbjct 8407926 CTGGCGATATTGAACGGCACGCCAAGTCCCATGTCGGCCGAGCGCTGGTACATCTGACAG 8407985 Query 27310 GAGAGCTCTCCATCGCTTACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATG 27369 || | ||| || || ||||| ||||| || | ||||||||| || || ||||| Sbjct 8407986 GACAACTCGCCGTCAGCCACGTAGAACTGGCAGAACATGTGGCACGGCGGGAGCGCCATT 8408045 Query 27370 AGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTC-TTCTGGGTTGTT 27428 | | || |||||||| || ||| | ||| || | ||| || || | || Sbjct 8408046 TCGTTGAGATCCGCCGGGTTCCACGCCGACAGCACGATCCGTCGGTCGGTCGGGTTCGTG 8408105 Query 27429 C----CTGATG-AGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCT 27483 | || || | || | ||| ||||| ||||| ||| || |||||| Sbjct 8408106 CGCAGCTTGTGAATAACCTCCGCG------AGCTGGTCCACGCCCTGGTTCGTGTAGTCG 8408159 Query 27484 ACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCC 27543 | |||||||||||||| || || || |||| ||| ||||| ||||| |||||||| Sbjct 8408160 GCATGCATGTCCGTGTACTTGGCCCCAAAGTGCCGCCACTGGAAGCCGTAGACCGGTCCG 8408219 Query 27544 AGGTCTCCCTCTTCCCTGTGCTCGAAG-CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTT 27602 || || ||| |||| | | | | | || || | |||||| | | || | || || || Sbjct 8408220 AGATCGCCCACTTCTC-GCGATTGCAGTCCACGACTGTCCAGATACTCCCGCGATCCATT 8408278 Query 27603 GGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGAC 27662 | |||||||||| | | |||||| ||| | | | ||| || |||| Sbjct 8408279 GCCGTCCCAGATGTGGATGTCCTTCTGCTGCAGCGTGTGCGCACTCGTGTCTCCACTGAT 8408338 Query 27663 GAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 ||||||||||||||||||| | ||| | ||| || || | |||||||||||| || || Sbjct 8408339 GAACCACAGCAGCTCCTCCGCCACGCCGCGCCAGAACACGCGCTTGGTCGTGAGCAGTGG 8408398 Query 27723 AAAC----TGTCCCTTGAGGCCGTACCTGGCCTGAGAACCAAACACGGACAAGACTCCCG 27778 ||| |||||| | || | | ||| ||| | ||||| || |||| || | Sbjct 8408399 GAACACGTTGTCCC-TCAGACTGAACCGCATCTGCGCGCCAAAGACCGACAGCGTGCCTG 8408457 Query 27779 TGCCCGTCCTGTCTCC 27794 | ||||||| |||||| Sbjct 8408458 TTCCCGTCCGGTCTCC 8408473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506830723742