Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sojae_20[genbank_20GCA_5F000149755.2_202011-10-03] 82 sequences; 82,597,641 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq8 107 7e-19 >seq8 Length=3549547 Score = 107 bits (118), Expect = 7e-19 Identities = 195/277 (70%), Gaps = 10/277 (4%) Strand=Plus/Minus Query 31005 CCATGCACATGTGTCGCGCCTTAATGACCACACCGACGCCCTTGGCTTCCAGGTGCTCGA 31064 ||||||||||||| |||| ||||| || | |||||||||| || | | | | Sbjct 1029473 CCATGCACATGTGCGTGGCCTCGATGACGACGGCCACGCCCTTGGGCTCGATGACGCCCA 1029414 Query 31065 ACAGTGCGTCCGCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCGGCG--AGCATA 31122 | |||| |||||||| | || || || |||||||| ||||||||||| || | | Sbjct 1029413 TGATGGCGTTGGCGATCTGCTTGGTCAGGCGCTCCTGCACCTGCAGGCGGCGCGAGAAGA 1029354 Query 31123 CATGTCCGC-CAGGCGGGACAGCTTGCTCAGGCCCACGATACGACCGTTCGGAATGTAGC 31181 | | ||| || | || ||||||||| || |||| | ||||| || ||||||| Sbjct 1029353 CCT---CGCTCACTCTGGCCAGCTTGCTGAGCCCCAGCACCTTGCCGTTGGGGATGTAGC 1029297 Query 31182 TGATCGTG-ACCGTGCCGAAGATCGGCGCGAGGTGATGCTCGCA-ATGTGAGTAGATGGG 31239 ||| ||| ||| |||| || ||| | | ||| |||||||| ||| ||||| | | Sbjct 1029296 CGAT-GTGCACCTTGCCCGCGAAGGGCACCATGTGGTGCTCGCACATG-GAGTACAGGTC 1029239 Query 31240 GATGTCGCGCACCGTCACCATCTGGTCATGCTTCTCC 31276 |||||||||||| | ||||||| ||| || | |||| Sbjct 1029238 GATGTCGCGCACGATGACCATCTCGTCGTGGTCCTCC 1029202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187289417626752