Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sp._20Chile5_20[genbank_20GCA_5F001712635.1_202016- 08-24] 11,901 sequences; 84,445,542 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq7194 201 2e-46 seq10216 192 1e-43 seq3541 113 1e-19 seq2597 113 1e-19 seq6574 107 4e-18 seq4718 107 4e-18 seq6130 104 5e-17 seq11095 91.5 3e-13 seq8062 91.5 3e-13 seq6753 91.5 3e-13 seq4305 91.5 3e-13 seq2596 91.5 3e-13 seq854 91.5 3e-13 seq4410 86.0 1e-11 seq5891 84.2 5e-11 >seq7194 Length=30219 Score = 201 bits (222), Expect = 2e-46 Identities = 684/1050 (65%), Gaps = 37/1050 (4%) Strand=Plus/Minus Query 318990 CTCTTTGTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGG--GTGTCATGTCA 319047 ||| ||||| ||||| || ||||||| ||||| |||||||| | ||||||| || Sbjct 12477 CTCCTTGTCCTCACCAGACTGGAAACGCCACTGGATGTACTGGTTCGCAGTGTCAT--CA 12420 Query 319048 AGATGATCCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGA 319107 || || ||||| ||||||||||| || ||||| || ||||| || | |||||| || Sbjct 12419 AGGTGGTCCTCAATGTGGTGGAACGCGTGCTGAGCGACGTACGCGAAACGCATCGAAGGG 12360 Query 319108 TGCTTCCAAACACTACCGATGGTGGCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTG 319167 |||||||| | |||| | |||| || | | || || |||| ||| || | || Sbjct 12359 TGCTTCCACAGCGTACCCGTCGTGGGCTCGACCTCACCAGTCAGCATCTTGATCATCGTA 12300 Query 319168 CTTTTCCCCGCACCGTTTTCGCCCACCACACCGATCCTG-------GAGTTCAGCGATAC 319220 || || |||||||| || | |||| |||| | | ||| || || || Sbjct 12299 GACTTACCGGCACCGTTCGGCCCAAGCACAGCGATACGGCTCGACAGAGCGCA-CGTCAC 12241 Query 319221 CTGGGCATTCACGTTGTCAAAGATTAGTTTTTCCGTACCCGGATACTTGAACCCCACACC 319280 | | || |||| | ||| || | || ||| || ||| || || || Sbjct 12240 CGAGATGTT---GTTG--ATAGACGGCTTCTCGCG-ACCAGGGTACGTGTACGTG-CAGT 12188 Query 319281 GCGT-AGCTTCATGATGGCACGGTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGG 319339 ||| || ||||| | | |||| ||||| | | ||||| || ||||| | Sbjct 12187 TCGTCAGACGAATGATCGGCTTGCCCTTGTTCTTGATATCAGCAAGGAAACCAGGCTCCG 12128 Query 319340 GGAACTTCCACGTGGTCTTCGTCTCGGTAAGGGCGTAGTAACTCGCTGATTCGGGACGCT 319399 ||||| | || || | | | | || ||||||| | | || || | Sbjct 12127 GGAACGTGAACTTGAACGTGGCGGCCTCCAGCTCGTAGTACGCCTTAGCCTCCGGCTTCA 12068 Query 319400 TCTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAAT 319459 || |||||||| ||||| || ||||||||| |||||||||| || | ||||| | Sbjct 12067 CCTCCACGAACTTCGACAGGTTGCCCTTGTACGTCTTCAGCTTGCGGGTC---TCGTAGT 12011 Query 319460 GGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACG 319519 |||| || ||||| || | ||||||||| || |||||||| ||||| || | || || Sbjct 12010 GGATGATGTTCGTGCACACCGTGTCGAGGAAGCCAGAGTCGTGGGACACCATGATGCTCG 11951 Query 319520 AAACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGAT 319579 |||| | ||||| | |||||| | || |||| |||||| |||| | | Sbjct 11950 TCACGTTCGGCAGGTTCACCAGGTAGTTCTCCAGCCACGCCACGTTCTTCACATCCAAGT 11891 Query 319580 GGTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAG 319639 |||| |||||||| || || ||||| | | || ||| | ||||| || || || || Sbjct 11890 GGTTCGTCGGCTCATCGAGCAGCAGGATATCGGCCTTCTGCAGCATGGCGCGGGCCAGCT 11831 Query 319640 CGAGTTTCATTTTCCACCCTCCGGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAATAT 319699 | | |||||| ||||| || || ||||| ||| | | | || |||| | Sbjct 11830 CCAATTTCATCTTCCAACCGCCCGAAAGCGTGCCCACGGCCTGCGCCTGCATCTCAGCAG 11771 Query 319700 CAAAGCCAACCGATTCTAGAGTAGTTACGATCTTTTCACGAGACCAAATGTTTTCCTTTA 319759 || || || | ||||| ||||||| || |||| | |||| ||| | Sbjct 11770 TGAAACCGACGCCGGCCAGAGTGTCCACGATCTCGTCGCGAGGCG---TGTT---CTTCA 11717 Query 319760 CTTGTTCATCATTGG-CAA--TGAAGTCAATGATAGCCGTGTTAGAATCGGACCCGTCGA 319816 | || |||| | ||| ||||||| | | | | | | || ||| | | | Sbjct 11716 ---GGTCCTCATCGCACAAGATGAAGTCCACCACCGACAGCTCGGCCTCAGACGCCTGCA 11660 Query 319817 GATCGTGTTCCACGTAAGCAGTTTTCAAAACATC-CGCAGAGGGGAACCCTTCAAGCTGG 319875 | | ||| |||||| | | || ||||| | || ||| || |||||||| || |||||| Sbjct 11659 GGTTGTGCTCCACGAACACCGTCTTCAAGTCCTCACGC-GACGGGAACCCATCCAGCTGG 11601 Query 319876 CCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCG 319935 ||||| | ||||||||||| || || || ||||| ||||| || |||||||||||| Sbjct 11600 CCGTTGGCGATAGCGCGCATAAGCGTCGACTTACCACAACCGTTCGGGCCACACAGACCG 11541 Query 319936 TAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCATAT 319995 || |||| ||||| |||||| | |||| ||||||||| ||||| | ||||| || Sbjct 11540 TAACGGTGACCGCGCTTCAGGCGAAGACGCGCGTTGTTCAGCAGAATCATACCACCGTAC 11481 Query 319996 GCCAGAGAAAATTCACAATCACACAGATCC 320025 || || || || || || | ||||| ||| Sbjct 11480 GCAAGCGAGAACTCGCAGTTGCACAGGTCC 11451 >seq10216 Length=39351 Score = 192 bits (212), Expect = 1e-43 Identities = 680/1045 (65%), Gaps = 27/1045 (3%) Strand=Plus/Minus Query 318990 CTCTTTGTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGG--GTGTCATGTCA 319047 ||| ||||| |||||||| ||||||| ||||| |||||||| | ||||||| || Sbjct 21494 CTCCTTGTCCTCACCGGACTGGAAACGCCACTGGATGTACTGGTTCGCAGTGTCAT--CA 21437 Query 319048 AGATGATCCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGA 319107 || || ||||| ||||||||||| || ||||| || ||||| || | ||||||| || Sbjct 21436 AGGTGGTCCTCAATGTGGTGGAACGCGTGCTGAGCAACGTATGCGAAACGCATAGAAGGG 21377 Query 319108 TGCTTCCAAACACTACCGATGGTGGCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTG 319167 |||||||| | |||| | |||| || | | || || |||| ||| || | || Sbjct 21376 TGCTTCCACAGCGTACCCGTCGTGGGCTCGACCTCACCAGTCAGCATCTTGATCATCGTC 21317 Query 319168 CTTTTCCCCGCACCGTTTTCGCCCACCACACCGATCCTGGAGTTCAGCGATACCTGGGCA 319227 || || |||||||| ||| | |||| |||| | | ||| | | || Sbjct 21316 GACTTACCGGCACCGTTCGGGCCAAGCACAGCGATACGGCTCGACAGAGCGCACGTCACA 21257 Query 319228 TTCACGTTGTCAA-AGATTAGTTTTTCCGTACCCGGATACTTGAACCCCACACCGCGT-A 319285 | ||||| | ||| |||| || || || ||| || || || ||| | Sbjct 21256 GAGATGTTGTTGATAGACG-GTTTGTCGCGGCCAGGGTACGTGTACGTG-CAGTTCGTCA 21199 Query 319286 GCTTCATGAT-GGC--ACGGTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGGGGA 319342 | ||||| ||| || | ||| ||||| | | ||||| || ||||| |||| Sbjct 21198 GACGAATGATCGGCTTACCCTTGTTCT---TGATATCGGCAAGGAAACCAGGCTCCGGGA 21142 Query 319343 ACTTCCACGTGGTCTTCGTCTCGGTAAGGGCGTAGTAACTCGCTGATTCGGGACGCTTCT 319402 || | || || | | | | || ||||||| | | || || | || Sbjct 21141 ACGTGAACTTGAACGTGGCAGCCTCCAGCTCGTAGTACGCCTTAGCCTCCGGCTTCACCT 21082 Query 319403 TCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGA 319462 |||||||| ||||| || ||||||||| |||||||||| || | ||||| |||| Sbjct 21081 CCACGAACTTCGACAGGTTGCCCTTGTACGTCTTCAGCTTGCGGGTC---TCGTAGTGGA 21025 Query 319463 TAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAA 319522 | || ||||| || | ||| |||||||| |||||||| ||||| || | || || | Sbjct 21024 TGATGTTCGTGCACACCGTGTCCAGGAACCCAGAGTCGTGGGACACCATGATGCTCGTCA 20965 Query 319523 CGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATGGT 319582 ||| | ||||| | |||||| | || ||| ||||| |||| | |||| Sbjct 20964 CGTTCGGCAGGTTCACCAGGTAGTTCTCCAGCCAAGCGACGTTCTTCACATCCAAGTGGT 20905 Query 319583 TGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGA 319642 | |||||||| ||||| || || | | || ||| | ||||| ||||| || || | | Sbjct 20904 TCGTCGGCTCATCAAGCAGGAGGATATCGGCCTTCTGCAGCATAGCACGAGCCAGCTCCA 20845 Query 319643 GTTTCATTTTCCACCCTCCGGAAAGAGTGTTAATTGGG-GCAGATTGGCGCTCAATATCA 319701 |||||| ||||| || || ||||| ||| | | ||| | | |||| | Sbjct 20844 ATTTCATCTTCCAACCACCCGAAAGGGTGCCCACGGCCTGCACCT-GCATCTCAGCAGTG 20786 Query 319702 AAGCCAACCGATTCT-AGAGTAGTTACGATCTTTTCACGAGACCAAATGTTTTCCTTTAC 319760 || || || | | || ||||| || | || | ||| | || | ||| | Sbjct 20785 AAACCGAC-GCTGCTGAGAGTGTCGACAACCTCCTGGTGAGG---AGTGCT---CTTCAA 20733 Query 319761 TTGTTCATCATTGGCAATGAAGTCAATGATAGCCGTGTTAGAATCGGACCCGTCGAGATC 319820 | |||||| | |||||||| | | | | | | || ||| | | || | Sbjct 20732 GTCCTCATCACAGAAGATGAAGTCCACCACGGACAGCTCGGCCTCAGACGCCTGCAGGTT 20673 Query 319821 GTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCCGTT 319880 ||| || ||| | |||| |||| | ||| || ||||| || || ||||||||||| Sbjct 20672 GTGCTCGACGAACACAGTCTTCAGGTCCTCCTTTGACGGGAAACCATCCAGCTGGCCGTT 20613 Query 319881 CACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCG 319940 |||||||||||||||| || || || || ||||| || |||||||||||||| || Sbjct 20612 GGCAATAGCGCGCATCAGCGTCGACTTGCCACAACCGTTGGGGCCACACAGACCGTAACG 20553 Query 319941 GTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCATATGCCAG 320000 || || || |||||| | |||| ||||||||| ||||| | ||||| || || || Sbjct 20552 GTGACCACGCTTCAGGCGAAGACGCGCGTTGTTCAGCAGAATCATACCACCGTACGCAAG 20493 Query 320001 AGAAAATTCACAATCACACAGATCC 320025 || || || || | |||||| ||| Sbjct 20492 CGAGAACTCGCAGTTACACAGGTCC 20468 >seq3541 Length=16018 Score = 113 bits (124), Expect = 1e-19 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 263 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 204 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 203 CCCACGGTGGGC 192 >seq2597 Length=1273 Score = 113 bits (124), Expect = 1e-19 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| Sbjct 780 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 721 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 720 CCCACGGTGGGC 709 Score = 86.0 bits (94), Expect = 1e-11 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTT 165764 ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct 55 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTT 1 >seq6574 Length=4645 Score = 107 bits (118), Expect = 4e-18 Identities = 67/72 (93%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| |||| Sbjct 7 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTGGAGC 66 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 67 CCCACGGTGGGC 78 >seq4718 Length=1338 Score = 107 bits (118), Expect = 4e-18 Identities = 67/72 (93%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| |||| Sbjct 80 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTGGAGC 21 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 20 CCCACGGTGGGC 9 Score = 107 bits (118), Expect = 4e-18 Identities = 67/72 (93%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| |||| Sbjct 1320 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTGGAGC 1261 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1260 CCCACGGTGGGC 1249 Score = 105 bits (116), Expect = 1e-17 Identities = 66/71 (93%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| |||| Sbjct 625 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTGGAGC 566 Query 165770 CCCACGATGGG 165780 |||||| |||| Sbjct 565 CCCACGGTGGG 555 >seq6130 Length=61013 Score = 104 bits (114), Expect = 5e-17 Identities = 196/283 (69%), Gaps = 8/283 (3%) Strand=Plus/Minus Query 281741 CGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAACTG 281800 |||||||||||| | | ||| || ||| || || |||||||| | || || ||||| Sbjct 56346 CGTGAAGATATAACGCGGACTGGCAGCGTCCTTGCCGCCCTGCAGTCGCGTGCCGAACTG 56287 Query 281801 ACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGAC 281860 |||| ||| | | | | ||| ||| || ||| | ||||| |||| |||||| Sbjct 56286 ACCCGACGGATAGAGCAGCGGCAGGTTGTTGGAGCCCACGAAGTCCTGCGCCATGTTGAC 56227 Query 281861 GATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCG--GCAACATAA 281918 ||| ||| || ||||| ||||||||||| || || || |||||||| ||| |||| Sbjct 56226 GATCGTCGAGTGCAGCGAGACCTCACCGTGATGGTAAGCCGTGTGTTCGCTGCA--ATAA 56169 Query 281919 CCACTGAACTGTGCTACCTTCACGTCTGATGTCAAGTTGCGTTT--GAAAGCGCAATATA 281976 || ||||| || |||||||| || ||||| ||||| || || || || | | | Sbjct 56168 CCCGCCAACTGCGCCACCTTCACCTCACGAGTCAACTTGCGCTTCAGACAG-GCGA-AGA 56111 Query 281977 ATACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGG 282019 || || || || || ||||| ||||| || || ||||| Sbjct 56110 GCACCTTACGCTGCGACACCTTGAGGCCATCGACCACCGACGG 56068 >seq11095 Length=1281 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||| Sbjct 209 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 268 Query 165771 CCACG 165775 ||||| Sbjct 269 CCACG 273 >seq8062 Length=1108 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||| Sbjct 237 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 296 Query 165771 CCACG 165775 ||||| Sbjct 297 CCACG 301 >seq6753 Length=1627 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||| Sbjct 273 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 214 Query 165771 CCACG 165775 ||||| Sbjct 213 CCACG 209 >seq4305 Length=1080 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||| Sbjct 209 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 268 Query 165771 CCACG 165775 ||||| Sbjct 269 CCACG 273 >seq2596 Length=1028 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||| Sbjct 576 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 517 Query 165771 CCACG 165775 ||||| Sbjct 516 CCACG 512 >seq854 Length=1298 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||| Sbjct 209 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 268 Query 165771 CCACG 165775 ||||| Sbjct 269 CCACG 273 >seq4410 Length=40836 Score = 86.0 bits (94), Expect = 1e-11 Identities = 192/283 (68%), Gaps = 8/283 (3%) Strand=Plus/Minus Query 281741 CGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAACTG 281800 |||||||||||| | | ||| ||| ||| || || |||||||| | || || ||||| Sbjct 17821 CGTGAAGATATAACGCGGACTGGCGGCGTCCTTGCCGCCCTGCAGTCGCGTGCCGAACTG 17762 Query 281801 ACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGAC 281860 |||| ||| | | | | ||| ||| || ||| | ||||| |||| |||||| Sbjct 17761 ACCCGACGGATAGAGCAGCGGCAGGTTGTTGGAGCCCACGAAGTCCTGCGCCATGTTGAC 17702 Query 281861 GATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTT--CGGCAACATAA 281918 ||| ||| || ||||| |||| ||||| || || || |||||| | ||| ||| Sbjct 17701 GATCGTCGAGTGCAGCGAGGCCTCGCCGTGATGGTAAGCCGTGTGTTCACTGCA--ATAC 17644 Query 281919 CCACTGAACTGTGCTACCTTCACGTCTGATGTCAAGTTGCGTTT--GAAAGCGCAATATA 281976 || ||||| || |||||||| || |||| ||||| || || || || | | | Sbjct 17643 CCCGCCAACTGCGCCACCTTCACCTCGCGAGTCAGCTTGCGCTTCAGACAG-GCGA-AGA 17586 Query 281977 ATACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGG 282019 || || || || || ||||| ||||| || || ||||| Sbjct 17585 GCACCTTACGCTGCGACACCTTGAGGCCATCGACCACCGACGG 17543 >seq5891 Length=34621 Score = 84.2 bits (92), Expect = 5e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 281735 CAGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCC 281794 ||| || ||||| || || | || || || || || || ||| ||| | || || Sbjct 14319 CAGGTTGGTGAAAATGTAACGAGCGCTGGCCGCATCCTTGCCGCCCATCAGTCGCGTACC 14378 Query 281795 AAACTGACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAG 281854 ||||| || |||| ||| || ||||| ||||| || || |||| || |||| Sbjct 14379 GAACTGGCCAATCGGCGACAGGAGGTGGATGTTGTTGCTGCCCACAAAATCTTGGGCCAT 14438 Query 281855 GTTGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAAC 281914 ||| ||||| || ||||| || ||||| ||||||||||| || |||||| | || Sbjct 14439 GTTCACGATGGTACCCTGCAGACTCACCTCTCCGTGGTGATACGCCGAGTGTTCCGAGAC 14498 Query 281915 ATAACCACTGAACTGTGCTACCTT 281938 ||||||| ||||| || ||||| Sbjct 14499 ATAACCAGCCAACTGCGCGACCTT 14522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057662701343630