Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sp._20Chile5_20[genbank_20GCA_5F001712635.1_202016- 08-24] 11,901 sequences; 84,445,542 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq848 212 1e-49 seq4274 179 8e-40 seq6904 158 3e-33 seq2809 149 1e-30 seq2060 104 5e-17 seq1363 98.7 2e-15 seq1303 89.7 1e-12 seq4438 86.0 1e-11 >seq848 Length=74974 Score = 212 bits (234), Expect = 1e-49 Identities = 1051/1645 (64%), Gaps = 84/1645 (5%) Strand=Plus/Minus Query 248461 TTCGACAAAATCTCGGCGCGCATCAAGAAGCTCTGTTATGGTCTGGAACCCAACTTCGTC 248520 |||||||| ||| |||||||||||| ||||| || || || ||| || | | ||| Sbjct 18172 TTCGACAAGATCACGGCGCGCATCACCAAGCTGTGCTACGGCCTGAGTCCGGAGTACGTG 18113 Query 248521 GATCATGTGGCCATCGCCCAGAAAGTTATTTCGGGCGTCTACACCGGAGTAACAACGACA 248580 |||| ||| ||| | ||||| || | |||||| ||| |||| || || ||| | Sbjct 18112 GATCCCGTGAAGATCTCGCAGAAGGTGGTGGTGGGCGTGTACCCCGGCGTGACCACGTCG 18053 Query 248581 GAACTGGACACCTTAGCTGCGGAGACGGCGGCGTACATGGCGATTGCA-CACCCCGACTA 248639 || |||||| | || || ||||||||||| ||| || | ||| ||||| |||| Sbjct 18052 GAGCTGGACGAGCTGGCGGCTGAGACGGCGGCCTAC-TGCAGCACGCAGCACCCGGACTT 17994 Query 248640 CTCGCTGCTGGCCGGGAGGATCGCCGTCTCAAGGCTTCACAAAGAAACGAAAGAGTCGTT 248699 |||| |||||| | | | ||||| ||||| | || ||||| | || || || || Sbjct 17993 CTCGAAGCTGGCGGCGCGTATCGCGGTCTCGAACCTGCACAAGAACACCAACAAGGTCTT 17934 Query 248700 CGTCGAAACCATGG--CTGACCTAC----ATGCCTATGGGA------------------- 248734 | || | ||| | ||| | || ||| | | || Sbjct 17933 CAGTGACAACATCGAGCTGTTCCACCGCAATGTGCACGAGAAGACGGGCGCCGCGGCGCC 17874 Query 248735 --TGGTCGCCGATGACGTCCAC---ACCGTCATTCAGGACAACGCGCACCTCCTGGACGG 248789 || ||||||| ||||| || | ||| || ||| |||| | || ||| || Sbjct 17873 GCTGATCGCCGACGACGTGTACGAGATCGTGATGCAGCACAAGG---ACGAGCTGAACTC 17817 Query 248790 CGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAA 248849 || || | ||| | || || |||||||| | ||| | ||||| ||||| ||| Sbjct 17816 GGCCATCATCCACGACCGCGACTTCGAGTACGACTACTTCGGCTTCAAGACGCTCGAGCG 17757 Query 248850 ATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCG 248909 || ||| || | | |||||| | || ||||| ||||| | | ||||| Sbjct 17756 CGGCTACCTCTTCCGCGTGAACGGCAAGGTGGTCGAACGTCCGCAGCAGCTCATCATGCG 17697 Query 248910 AGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAAT 248969 ||||| | || || |||||| |||| || | ||| ||||| ||| || Sbjct 17696 CGTGGCGCTGGGCATCCACAAGACGAACATCAAGGCGGCGCTGGAGACCTACGAGCTCAT 17637 Query 248970 GAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTAC-CGTCAACA 249028 | | | | || || ||||| || ||||| ||||||||||| || | | | Sbjct 17636 GTCGCAGAAGTTCTTCACGCACGCCACGCCCACGCTGTTCAACGCCGGCACGCCGCGGCC 17577 Query 249029 ATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATG 249088 |||||| |||||||| || || |||||||| |||||||| | || ||||| || | Sbjct 17576 G-CAGCTGTCGTCGTGCTTCCTGCTGGCCATGCAGGACGACTCCATTGAGGGCATCTACG 17518 Query 249089 ACACGCTTAAACAGACGGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCT 249148 ||||||| || ||| ||| || || || | || ||||| ||||| || | | Sbjct 17517 ACACGCTCAAGCAGTGTGCGTGCATCTCCAAGTGGGCCGGCGGCATCGGCATCAGCATGC 17458 Query 249149 CCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTG--ATGGTAT 249206 ||||||||| || | |||||| || || || || || || |||| || Sbjct 17457 ACAACATCCGCGCCACCAACAGCTACATCCGCGGCACCAACGGC-TC-GTCCAATGGCAT 17400 Query 249207 CGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC-- 249264 | | ||| | || || || | ||| || | | | | |||||| ||| || Sbjct 17399 CATCCCCATGCTGCGTGTGTTCAACGACACGGCGCGCTACGTGGACCAGGGCGGCGGCAA 17340 Query 249265 -CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCT 249323 || ||||| || |||||||| || |||| |||||||||||| | || |||||||| Sbjct 17339 GCGCAAGGGCTCCTTCGCCATCTACCTGGAGCCGTGGCACGCCGACGTGTTCGAGTTCCT 17280 Query 249324 GGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCT 249383 |||| || |||||| |||||||||||||| | ||||| ||||| ||||||| | Sbjct 17279 GGACCTGCGCAAGAACCACGGCAACGAGCTCCACCGCGCGCGCGACCTGTTCTACGCGTT 17220 Query 249384 GTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTC 249443 |||||| | || |||||||| ||||| | ||| ||||| | |||| || ||| Sbjct 17219 GTGGGTGCCTGATCTGTTCATGAAGCGCGTGGAAGCCAACGGCAAGTGGAGTCTGTTTTG 17160 Query 249444 TCCGTCCGACGCCCCGGACCTCATCGATCTACACGGCGCCGACTTCGACCAAGC-CTATA 249502 || ||| || |||||||| | | |||| ||| |||| | || || || Sbjct 17159 CCCCAACGAAGCGCCGGACCTGTACAAGTGCTGGGGCGACGAGTTCG---AGGCGCTGTA 17103 Query 249503 --AGAAATACGAATCCAACGGCATCG---GCAAGACAATCAAGGCTCGGACCCT---TTT 249554 |||| ||||| | | ||| || ||||||| ||||| || | | || || Sbjct 17102 CGAGAAGTACGAGCGCGAAGGCCGCGCCCGCAAGACCATCAACGCGCAGCAGCTGTGGTT 17043 Query 249555 TGCGAAGGTGGTGGAGTCCCAGATAGAGACAGGGGGGCCGTATTAT-TTGTTCAAAGACG 249613 || | | |||| | ||||| ||||| || | || | | || ||||||| |||| Sbjct 17042 CGCCA---TCCTGGACGCGCAGATCGAGACGGGCGTTCCCT-TCATGCTGTTCAAGGACG 16987 Query 249614 CGTGCAACGCCAAGAGTAACCAACGGCATCTTGGTACCATCCGCTCGTCAAATCTCTG-T 249672 || |||| |||| ||||| | | | || || |||||||||||| || | || | Sbjct 16986 CGGCCAACCGCAAGTCCAACCAGCAGAACCTGGGCACCATCCGCTCGAGCAACTTGTGCT 16927 Query 249673 GCAGAGGTGATTCAATACTCGTCCAAGGAGGAGATTGCCGTCTGCAACCTGGCAAGCATC 249732 || ||||| || | ||| || | || ||| | ||||| ||||||||| || || Sbjct 16926 GC-GAGGTCATGGAGTACACGGCGCCCGATGAGGTGGCCGTGTGCAACCTG----GCGTC 16872 Query 249733 AATCTCGTGAGGCACGTGAG-GGCGGACAGGACGTTCGACTTCGAGCGTCTTCACCGGAC 249791 | || || || | || ||| | ||| ||| | || || || || Sbjct 16871 TGTGGCGCTGCCCAAGTTCGTGGAAGACGGCGTATTCAACTACAAGAAGCTGTAC--GA- 16815 Query 249792 GGCGAAACAGGCGATCA---AAAACCTCAACAAGGTGATTGATGTCAATTTTTACCCC-- 249846 || | ||| | ||| ||||| |||||||| || || ||||| | || ||| Sbjct 16814 GGTCACGAAGGTGGTCACGCGCAACCTGAACAAGGTCATCGACGTCAACTACTATCCCGT 16755 Query 249847 -CTTGAGGAATGCAGGTTGTCCAACATGAAGCACCGTCCATGTGGGC-TGGGCGTTCAGG 249904 | |||| ||| |||||||||| ||||| || |||||| | || || |||| Sbjct 16754 GCCAGAGGCGCGCA---AGTCCAACATGCGCCACCG-CCCCGTGGGCATCGGTGTACAGG 16699 Query 249905 CACTGCACGACGTCTACATGGTGATGGGATTCCCCTTCGAGTCAGAGGAGGCAGCGACGC 249964 |||| |||| || ||| |||||| ||| | |||||| | ||||| | || Sbjct 16698 GACTGGCGGACGCCTTCATCCTGATGGACTTCGCGTTCGAGAGTGCCGAGGCGCGGGAGC 16639 Query 249965 TAAATAAACAGATTTTCGAGACCATCTATCACGGGAGCGTCGAGGCGTCCATCGAAAGGG 250024 | || || | || |||||||||||||| ||| | | ||| ||||||| |||| | Sbjct 16638 TCAACAAGAACATCTTCGAGACCATCTACTACGCCGCCATGGAGACGTCCATGGAAATCG 16579 Query 250025 CC-AAGATCGACGGACCATACGAGA 250048 || ||||| || || || ||||||| Sbjct 16578 CCAAAGAT-GAAGGGCCCTACGAGA 16555 >seq4274 Length=4240 Score = 179 bits (198), Expect = 8e-40 Identities = 838/1313 (64%), Gaps = 63/1313 (5%) Strand=Plus/Minus Query 248461 TTCGACAAAATCTCGGCGCGCATCAAGAAGCTCTGTTATGGTCTGGAACCCAACTTCGTC 248520 |||||||| ||| |||||||||||| ||||| || || |||||| || | | ||| Sbjct 1888 TTCGACAAGATCACGGCGCGCATCACCAAGCTGTGCTACGGTCTGAGTCCGGAGTACGTG 1829 Query 248521 GATCATGTGGCCATCGCCCAGAAAGTTATTTCGGGCGTCTACACCGGAGTAACAACGACA 248580 |||| ||| ||| | ||||| || | |||||| ||| |||| || || ||| | Sbjct 1828 GATCCCGTGAAGATCTCGCAGAAGGTGGTGGTGGGCGTGTACCCCGGCGTCACCACGTCG 1769 Query 248581 GAACTGGACACCTTAGCTGCGGAGACGGCGGCGTACATGGCGATTGCA-CACCCCGACTA 248639 || |||||| | || || ||||||||||| ||| || | || ||||| |||| Sbjct 1768 GAGCTGGACGAGCTGGCGGCTGAGACGGCGGCCTAC-TGTAGCACACAGCACCCGGACTT 1710 Query 248640 CTCGCTGCTGGCCGGGAGGATCGCCGTCTCAAGGCTTCACAAAGAAACGAAAGAGTCGTT 248699 |||| |||||| | | | ||||| ||||| | || ||||| | || || || || Sbjct 1709 CTCGAAGCTGGCGGCGCGTATCGCGGTCTCTAACCTGCACAAGAACACCAACAAGGTCTT 1650 Query 248700 CGTCGAAACCATGGC--TGACCTAC----ATGCCTATGGGA------------------- 248734 | ||| | ||| | || | || ||| | | || Sbjct 1649 CAGCGACAACATCGAGTTGTTCCACCGCAATGTGCACGAGAAGACGGGCGCCGCGGCGCC 1590 Query 248735 --TGGTCGCCGATGACGTCCAC---ACCGTCATTCAGGACAACGCGCACCTCCTGGACGG 248789 || ||||||| ||||| || | ||| || ||| |||| | || ||| || Sbjct 1589 GCTGATCGCCGACGACGTGTACGAGATCGTGATGCAGCACAAGG---ACGAGCTGAACTC 1533 Query 248790 CGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAA 248849 || || | ||| | || || |||||||| | ||| | ||||| ||||| ||| Sbjct 1532 GGCTATCATCCACGACCGCGACTTCGAGTACGACTACTTCGGCTTCAAGACGCTCGAGCG 1473 Query 248850 ATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCG 248909 || ||| || | | |||||| | || ||||| ||||| | | ||||| Sbjct 1472 CGGCTACCTCTTCCGCGTGAACGGCAAGGTGGTCGAACGTCCGCAGCAGCTCATCATGCG 1413 Query 248910 AGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAAT 248969 ||||| | || || |||||| |||| || || ||| ||||| ||| || Sbjct 1412 CGTGGCGCTGGGCATCCACAAGACGAACATCAAGGCCGCGCTGGAGACCTACGAGCTCAT 1353 Query 248970 GAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAACAA 249029 | | | | || || ||||| || ||||| ||||||||||| || | Sbjct 1352 GTCGCAGAAGTTCTTCACGCACGCCACGCCCACGCTGTTCAACGCCGGCACGCCGCGCCC 1293 Query 249030 TCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGA 249089 |||||| |||||||| || || |||||||| |||||||| | || ||||| || || Sbjct 1292 GCAGCTGTCGTCGTGCTTCCTGCTGGCCATGCAGGACGACTCCATTGAGGGCATCTACGA 1233 Query 249090 CACGCTTAAACAGACGGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTC 249149 |||||| || ||| || || || || | |||||||| ||||| || | Sbjct 1232 CACGCTCAAGCAGTGTGCCTGCATCTCCAAGTGGGCGGGCGGCATCGGCATCAGTATGCA 1173 Query 249150 CAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTG--ATGGTATC 249207 ||||||||| || | |||||| || || || || || || |||| ||| Sbjct 1172 CAACATCCGCGCCACCAACAGCTACATCCGCGGCACCAACGGC-TC-GTCCAATGGCATC 1115 Query 249208 GTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC--- 249264 | ||| | || || || | ||| || | | | | |||||| ||| | Sbjct 1114 ATCCCCATGCTGCGTGTGTTCAACGACACGGCGCGCTACGTGGACCAGGGCGGCGGTAAG 1055 Query 249265 CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTG 249324 || ||||| || |||||||| || |||| |||||||||||| | || |||||| || Sbjct 1054 CGCAAGGGCTCCTTCGCCATCTACCTGGAGCCGTGGCACGCCGACGTGTTCGAGTTCTTG 995 Query 249325 GACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTG 249384 ||| || |||||| |||||||||||||| | ||||| ||||| ||||||| || Sbjct 994 GACCTGCGCAAGAACCACGGCAACGAGCTCCACCGCGCGCGCGACCTGTTCTACGCGTTG 935 Query 249385 TGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCTTCTT-TC 249443 ||||| | || | |||||| ||||| | ||| ||||| | |||| | || || | Sbjct 934 TGGGTGCCTGATCTTTTCATGAAGCGCGTGGAAGCCAACGGCAAATGGA-GTTTGTTCTG 876 Query 249444 TCCGTCCGACGCCCCGGACCTCATCGATCTACACGGCGCCGACTTCGACCAAGC-CTATA 249502 || ||| || |||||||| | | |||| ||| |||| | || || || Sbjct 875 CCCTAACGAAGCGCCGGACCTGTACAAATGCTGGGGCGACGAGTTCG---AGGCGCTGTA 819 Query 249503 --AGAAATACGAATCCAACGGCATCG---GCAAGACAATCAAGGCTCGGACCCT---TTT 249554 |||| ||||| | | ||| || ||||||| ||||| || | | || || Sbjct 818 CGAGAAGTACGAGCGCGAAGGCCGCGCCCGCAAGACCATCAACGCGCAGCAGCTGTGGTT 759 Query 249555 TGCGAAGGTGGTGGAGTCCCAGATAGAGACAGGGGGGCCGTATTAT-TTGTTCAAAGACG 249613 || | | |||| | ||||| ||||| || | ||| | | || ||||||| |||| Sbjct 758 CGCCA---TCCTGGACGCGCAGATCGAGACGGGCGTGCCCT-TCATGCTGTTCAAGGACG 703 Query 249614 CGTGCAACGCCAAGAGTAACCAACGGCATCTTGGTACCATCCGCTCGTCAAATCTCTG-T 249672 || |||| |||| ||||| | | | || || ||||||||||| || | || | Sbjct 702 CGGCCAACCGCAAGTCCAACCAGCAGAACCTGGGCACCATCCGCTCCAGCAACTTGTGCT 643 Query 249673 GCAGAGGTGATTCAATACTCGTCCAAGGAGGAGATTGCCGTCTGCAACCTGGC 249725 || ||||| || | ||| || | || ||| | ||||| ||||||||||| Sbjct 642 GC-GAGGTCATGGAGTACACGGCGCCCGACGAGGTGGCCGTGTGCAACCTGGC 591 >seq6904 Length=25300 Score = 158 bits (174), Expect = 3e-33 Identities = 269/387 (70%), Gaps = 6/387 (2%) Strand=Plus/Plus Query 253995 GGCGACCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATC 254054 ||| | || || || ||||| ||| |||| || || || || ||||||||||| |||||| Sbjct 12546 GGCCAGCTGCCGCACTTGCTGTTCTACGGGCCGCCGGGCACGGGCAAGACGTCCACCATC 12605 Query 254055 CTGGCGCTGGCCCGAACCCTGTTGGGCGAGGGGAA---CATGAGAGAGCGCGTGCTCGAG 254111 ||||| | | || || || ||| || || || | |||| | || ||| Sbjct 12606 GTGGCGGTCGGGCGGCAGCTCTTCGGCTCGGACTTTCGCAAGAACGGGCGCTTCCTGGAG 12665 Query 254112 CTGAACGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCC 254171 || || || || ||||| ||||| | | || || ||||| ||| |||||| ||| | Sbjct 12666 CTCAATGCGTCGGACGACCGCGGCATCAAAGTGGTGCGCGAGAAGGTCAAGAGTTTTGCG 12725 Query 254172 AAGATGTCGATTTCGTCGTTCCAACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGAC 254231 || | || | || | | | | | ||| ||||| |||||| || | | |||||| Sbjct 12726 CAG--GGCGCTATCAGCAGCGCCAGCGGCCTG-CCGCCCTTCAAGATCATCGTGCTGGAC 12782 Query 254232 GAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCAC 254291 || || ||| |||||||| |||||||||||| || || ||||| | |||||||| || Sbjct 12783 GAAGCCGACTCCATGACGAACGACGCGCAGTCGGCGCTGCGCCGTATGATGGAGAACTAC 12842 Query 254292 TCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCGCTG 254351 ||| || ||||| || ||||| | |||||||||||| ||||||| || || Sbjct 12843 TCCAAGGTCACGCGCTTCTGCCTCATCTGCAACTACGTGAGCCGCATCATCGAGCCCGTG 12902 Query 254352 GCTTCTCGGTGCGCCAAGTTTCGATTC 254378 || || || ||||||||||| || ||| Sbjct 12903 GCCTCGCGTTGCGCCAAGTTCCGCTTC 12929 >seq2809 Length=17853 Score = 149 bits (164), Expect = 1e-30 Identities = 267/387 (69%), Gaps = 6/387 (2%) Strand=Plus/Plus Query 253995 GGCGACCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATC 254054 ||| | || || || ||||| ||| |||| || || ||||| ||||||||||| || ||| Sbjct 12548 GGCCAGCTGCCGCACTTGCTGTTCTACGGGCCGCCGGGAACGGGCAAGACGTCCACTATC 12607 Query 254055 CTGGCGCTGGCCCGAACCCTGTTGGGCGAGGGGAAC---ATGAGAGAGCGCGTGCTCGAG 254111 ||||| | | || || || ||| || | | || | |||| | || ||| Sbjct 12608 GTGGCGGTCGGGCGGCAGCTCTTCGGCTCGGACTTCCGCAAGAACGGGCGCTTCCTGGAG 12667 Query 254112 CTGAACGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCC 254171 || || || || ||||| ||||| | | || || ||||| ||| | |||| ||| | Sbjct 12668 CTCAATGCGTCGGACGACCGCGGCATCAAAGTGGTGCGCGAGAAGGTGAAGAGCTTCGCG 12727 Query 254172 AAGATGTCGATTTCGTCGTTCCAACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGAC 254231 || | || | || | | | | | ||| ||||| |||||| || | | |||||| Sbjct 12728 CAG--GGCGCTATCAGCAGCGCCAGCGGCCTG-CCGCCCTTCAAGATCATCGTGCTGGAC 12784 Query 254232 GAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCAC 254291 || || ||| |||||||| |||||||||||| || || ||||| | |||||||| || Sbjct 12785 GAAGCCGACTCCATGACGAACGACGCGCAGTCGGCGCTGCGCCGCATGATGGAGAACTAC 12844 Query 254292 TCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCGCTG 254351 ||| || ||||| || ||||| | ||||| |||||| ||||||| || || Sbjct 12845 TCCAAGGTCACGCGCTTCTGCCTCATCTGCAATTACGTGAGCCGCATCATCGAGCCCGTG 12904 Query 254352 GCTTCTCGGTGCGCCAAGTTTCGATTC 254378 || || || ||||||||||| || ||| Sbjct 12905 GCCTCGCGTTGCGCCAAGTTCCGCTTC 12931 >seq2060 Length=42285 Score = 104 bits (114), Expect = 5e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 157244 ACCCCGGGCTTGCTGTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGA 157303 || |||| |||| ||||||| |||| | ||||| || ||||||||||| ||||| || Sbjct 32091 ACGCCGGCCTTGGAGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGC 32150 Query 157304 GAAATCATGTCCATCCACTCGAATGGGTTGGCGCAGTTGTACACCTTGTCGTACCCCAGC 157363 || |||||||||||||| ||||| ||||| | |||||| | |||| |||||| Sbjct 32151 GAGATCATGTCCATCCAGTCGAACGGGTTCTTGGCGTTGTAGATCTTGGACACGCCCAGC 32210 Query 157364 TGGTTCAGCCAGTAGTCCGCCACAAACTTGATGTACT 157400 || |||| | ||| ||||| |||| ||||||| Sbjct 32211 GAGTACAGCAGGCGGTCGGCCACGAACTCAATGTACT 32247 >seq1363 Length=31850 Score = 98.7 bits (108), Expect = 2e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 157244 ACCCCGGGCTTGCTGTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGA 157303 || |||| |||| ||||||| |||| | ||||| || ||||||||||| ||||| || Sbjct 10223 ACGCCGGCCTTGGAGTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGC 10164 Query 157304 GAAATCATGTCCATCCACTCGAATGGGTTGGCGCAGTTGTACACCTTGTCGTACCCCAGC 157363 || |||||||||||||| ||||| ||||| | || ||| | |||| |||||| Sbjct 10163 GAGATCATGTCCATCCAGTCGAACGGGTTCTTGGCGTGGTAGATCTTGGACACGCCCAGC 10104 Query 157364 TGGTTCAGCCAGTAGTCCGCCACAAACTTGATGTACTCTGTCATGCTCTTCTCGCTGATA 157423 || |||| ||| ||||| |||| ||||||| |||| | | | | || Sbjct 10103 GAGTACAGCAGCCGGTCGGCCACGAACTCAATGTACTGGCACATGAGCGCCGAGTTCATG 10044 Query 157424 CCGATGAGCGCGACGGGAAGCG 157445 ||||||||| | || || |||| Sbjct 10043 CCGATGAGCTCCACCGGCAGCG 10022 >seq1303 Length=14214 Score = 89.7 bits (98), Expect = 1e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 115393 AACCTTAATATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGTGGAGTTGTTGCAG 115452 |||| || || || || | ||||| || || |||||||| |||||||||||||||||| Sbjct 5528 AACCGCAAGATGGCGCAGCGACTCTGGATAGGCTCGATGATCTTGGTGGAGTTGTTGCAG 5587 Query 115453 ACTATGATGAACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCGCAGCGCCTGGAAA 115512 | | ||||||||| ||| |||| | | ||||| | || ||||||||||| Sbjct 5588 GCCAGTGCGAACCGCGTAGTGGCCGAGAAGATTTCCATCGTACGGCGCAGCGCCTGCTGG 5647 Query 115513 GCACCAGGTGTCATCGAGTCTGCCTCGTCGAG 115544 || | | ||||| ||||| |||||||| || Sbjct 5648 GCGGCCGCCGTCATGGAGTCGGCCTCGTCCAG 5679 >seq4438 Length=26017 Score = 86.0 bits (94), Expect = 1e-11 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 115393 AACCTTAATATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGTGGAGTTGTTGCAG 115452 |||| || || || || | |||||||| || |||||||| ||||||||||||||||| Sbjct 21688 AACCGCAAGATGGCGCAGCGACTCTGAATAGGCTCGATGATCTTGGTGGAGTTGTTGCAA 21747 Query 115453 ACTATGATGAACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCGCAGCGCCTGGAAA 115512 | | ||| ||||| ||| |||| | | ||||| | || ||||||||||| | Sbjct 21748 GCCAGTGCGAATCGCGTAGTGGCCGAGAAGATTTCCATCGTACGGCGCAGCGCCTGCTGA 21807 Query 115513 GCACCAGGTGTCATCGAGTCTGCCTCGTCGAG 115544 || | | ||||| || || |||||||| || Sbjct 21808 GCGGCCGCCGTCATGGAATCGGCCTCGTCCAG 21839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073602670421568