Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phytophthora_20sp._20Chile5_20[genbank_20GCA_5F001712635.1_202016-
08-24] 11,901 sequences; 84,445,542 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq848 268 9e-67
seq4274 262 4e-65
seq5117 134 1e-26
seq1233 134 1e-26
seq10786 132 5e-26
seq6703 132 5e-26
seq1268 127 2e-24
seq779 127 2e-24
seq10994 113 4e-20
seq3516 93.3 4e-14
seq42 93.3 4e-14
seq6148 89.7 5e-13
seq2466 89.7 5e-13
>seq848
Length=74974
Score = 268 bits (296), Expect = 9e-67
Identities = 882/1350 (65%), Gaps = 42/1350 (3%)
Strand=Plus/Plus
Query 145051 GTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGT 145110
||||| || |||| | |||||||| |||| ||| || || |||| ||| |||||
Sbjct 16295 GTACTTGTTCACGATCGTGAACTCGCCCGCCAGCACGCGGCGGTTGTACATGTTGGACGT 16354
Query 145111 GAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTA 145170
| | || || | | |||||| ||||||||||| || || || | || ||||||||
Sbjct 16355 GTACGGCTCGATACTCTCGTTGTTGCCCAGGATCTGCGCCGTGGACGCCGTGGGCATCGG 16414
Query 145171 CGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCA 145230
||| |||| | || ||||| || ||||||| | | | |||| || | ||||
Sbjct 16415 CGCGACCAGCAGCGAGTTGCGAAGCCCGTGCTGCGCCACCTTGGCCTTCAGAGCCGCCCA 16474
Query 145231 ATCCCATAG---CGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCT 145287
||||| || ||| | |||| ||||| ||||||||||| |||| || ||||||| |||
Sbjct 16475 GTCCCAGAGACCCGACGACGGCGTCACGCCCCACATGTCGAACTGGAAGATGCCCTTGCT 16534
Query 145288 GGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGC 145347
||| ||| ||||| | | ||| || | |||||||| || ||
Sbjct 16535 GGCAGGGGAGCCTTCGTACGTCTCGTAGGGCCCTTCATCTTTGGCGATTTCCATGGACGT 16594
Query 145348 CTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATC 145407
||||| ||| || | || || |||||| || | | |||||||| | ||| || |
Sbjct 16595 CTCCATGGCGGCGTAGTAGATGGTCTCGAAGATGTTCTTGTTGAGCTCCCGCGCCTCGGC 16654
Query 145408 GCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCC 145467
|||||| ||| | | || ||| | || || || || || ||||||| || | |||
Sbjct 16655 ACTCTCGAACGCGAAGTCCATCAGGATGAAGGCGTCCGCCAGTCCCTGTACACCGATGCC 16714
Query 145468 GATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG-ATAGGATA-TCGATTACGG 145525
| ||| || || ||||||| | | | |||| || | | ||||| | | | || |
Sbjct 16715 CACGGGGCGGTGGCGCATGTTGGACTTGCGCGCC-TCTGGCACGGGATAGTAGTTGAC-G 16772
Query 145526 TCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAG 145585
||||| | || |||| ||| ||| || ||||| || | | || ||| | ||
Sbjct 16773 TCGATGACCTTGTTCAGGTTGCGCGTGACCACCTTCGTGACCTCGTACAGCTTCTTGTAG 16832
Query 145586 TCAAACCGAGCCTCGTCAACGACC--ACACAGCTATTGACGGCGATCGACGCCAAATTAC 145643
| || | || || |||| | |||| || | ||||||| || |
Sbjct 16833 TTGAATACGCCGTCTTCCACGAACTTGGGCAGC--------GCCACAGACGCCAGGTTGC 16884
Query 145644 AAACTGCCGTCTCCTC-GGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACAT 145702
| || ||| ||| || |||| || |||| | | || |||| |||||| ||||| |
Sbjct 16885 ACACGGCCACCTCATCGGGCGCCG-TGTACTCCATGACCTCGCAGCACAAGTTGCTCGAG 16943
Query 145703 TTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATG 145762
|||||| ||||| || ||||| || || | |||| |||||||||| | ||||||
Sbjct 16944 CGGATGGTGCCCAGGTTCTGCTGGTTGGACTTGCGGTTGGCCGCGTCCTTGAACAGCATG 17003
Query 145763 TACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAAACGGTGCAAGTCCTGCGC-- 145818
| || |||| ||||| | ||||| |||| ||| ||| || | ||||||
Sbjct 17004 AAGGGAACGCCCGTCTCGATCTGCGCGTCCAGGATGGCGAAC--CACAGCTGCTGCGCGT 17061
Query 145819 --ACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAAC 145876
| | | ||| || |||||| || ||||| ||| ||| ||| |||| |||
Sbjct 17062 TGATGGTCTTGC----GGGCGCGGCCTTCGCGCTCGTACTTCTCGTACAGCGCCTCGAAC 17117
Query 145877 GCGGAACCGTAGCAATCGGACAGGCCGGGACACTT-GTTGGGACACATCAGCGACCATAC 145935
|| || |||| | | ||||| | || | ||| |||||| || | ||| |||
Sbjct 17118 TCGTCGCCCCAGCACTTGTACAGGTCCGG-CGCTTCGTTGGGGCAAAACAGACTCCACTT 17176
Query 145936 GCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTC 145995
||||||||| | ||||||| ||| |||| ||| |||||||||| |||||| | || |||
Sbjct 17177 GCCGTTGGCTTCCACGCGCTTCATGAACAGATCAGGCACCCACAACGCGTAGAACAGGTC 17236
Query 145996 GCGCGCTTTGCAATCCTCAGCACCCATGTTTC--GCTTCAAATTAAGCACACT-ATAGAT 146052
|||||| | ||| | || || ||| || || | || | ||| | |
Sbjct 17237 GCGCGCGCGGTGGAGCTC-GTTGCCGTGGTTCTTGC-GCAGGTCCAGGA-ACTCGAACAC 17293
Query 146053 GTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTT---GCCACCCTG 146109
||| ||||||||||| || | |||| ||||| || || || || || ||| |||||
Sbjct 17294 GTCGGCGTGCCACGGCTCCAGGTAGATGGCGAAGGAGCCCTTGCGCTTGCCGCCGCCCTG 17353
Query 146110 GTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTAC 146169
|||||||| || || ||| ||| || || |||| |||||| || ||| |||
Sbjct 17354 GTCCACGTAGCGCGCCGTGTCGTTGAACACACGCAGCATGGGGATGATGCCATTGGACGA 17413
Query 146170 GCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAG 146229
|||||| || | || | || | || ||| | | || | | | |||||
Sbjct 17414 GCCGTTGGTGCCGCGGATGTAGCTGTTGGTGGCGCGGATGTTGTGCATGCTGATGCCGAT 17473
Query 146230 ACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAAT 146289
|||||| | ||||||| || || || | |||||| ||||||||||| |||||
Sbjct 17474 GCCGCCGGCCCACTTGGAGATGCACGCACACTGCTTGAGCGTGTCGTAGATGCCCTCAAT 17533
Query 146290 GCTATCGCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGC 146349
| ||| | ||| | ||||| |||||||| ||| ||||| | |||||| || ||
Sbjct 17534 GGAGTCGTCCTGCATGGCCAGCAGGAAGCACGACGACAGCTGCGGCCGCGGCGTGCCGGC 17593
Query 146350 CGAGAACAACGTCGGGCTCGCGTGCGTAAA 146379
||||| ||| || | |||||||| ||
Sbjct 17594 GTTGAACAGCGTGGGCGTGGCGTGCGTGAA 17623
>seq4274
Length=4240
Score = 262 bits (290), Expect = 4e-65
Identities = 885/1352 (65%), Gaps = 46/1352 (3%)
Strand=Plus/Plus
Query 145051 GTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGT 145110
||||| || |||| | |||||||| |||| ||| || || |||| ||| |||||
Sbjct 11 GTACTTGTTCACGATCGTGAACTCGCCCGCCAGCACGCGGCGGTTGTACATGTTGGACGT 70
Query 145111 GAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTA 145170
| | || || | | |||||| ||||||||||| || || || | || |||||||||
Sbjct 71 GTACGGCTCGATACTCTCGTTGTTGCCCAGGATCTGCGCCGTGGACGCCGTGGGCATGGG 130
Query 145171 CGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCA 145230
||||||||| | || ||||| || ||||| | | | | |||| || | ||||
Sbjct 131 CGCCACCAACAGCGAGTTGCGAAGCCCGTGTTGCGCCACCTTGGCCTTAAGAGCCGCCCA 190
Query 145231 ATCCCATAG---CGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCT 145287
||||| || ||| | |||| ||||| ||||||||||| |||| || ||||||| |||
Sbjct 191 GTCCCAGAGCCCCGACGACGGCGTCACGCCCCACATGTCGAACTGGAAGATGCCCTTGCT 250
Query 145288 GGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGT-TTTGGCGAGCTCGCAACTCG 145346
||| ||| ||||| | | || | |||| | |||||| | ||| ||
Sbjct 251 GGCAGGGGAGCCTTCGTACG-TCTCGTAGGGCCCTTCCTCTTTGGCAATCTCCATGGACG 309
Query 145347 CCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCAT 145406
||||| ||| || | || || |||||| || | | |||||||| | ||| | |
Sbjct 310 TCTCCATGGCGGCGTAGTAGATAGTCTCGAAGATGTTCTTGTTGAGCTCCCGCGCGTTGT 369
Query 145407 CGCTCTCGTACGGCAT-GCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACG 145465
| |||||| || |||| | || ||| | || || || || | ||||||| || | |
Sbjct 370 CACTCTCGAAC-GCATAGTCCATCAGGATGAAGGCGTCCGCCAATCCCTGTACACCAATG 428
Query 145466 CCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA-TCGATTACG 145524
|| | ||| || || ||||||| | | | |||| | | || || | | | ||
Sbjct 429 CCCACGGGGCGGTGGCGCATGTTGGACTTGCGCGCCTCCGGCACGGGGTAGTAGTTGAC- 487
Query 145525 GTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAA---TGTGCCGCAACTTTTC 145581
|||||| | || |||| ||| ||| || ||||| || | || | ||| | | |
Sbjct 488 GTCGATGACCTTGTTCAGGTTGCGCGTGACCACCTTCGTGACCTCGTACAGCATCCTGT- 546
Query 145582 AAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATT 145641
||| || | || || |||| || | | | || | ||||||| ||
Sbjct 547 --AGTTGAATACGCCGTCCTCCACGA--ACTTGGGAAGT----GCCACAGACGCCAGGTT 598
Query 145642 ACAAACTGCCGTCTCCTC-GGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTAC 145700
|| || ||| ||| || |||| || |||| | | || |||| |||||| |||||
Sbjct 599 GCACACGGCCACCTCGTCGGGCGCCG-TGTACTCCATGACCTCGCAGCACAAGTTGCTGG 657
Query 145701 ATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCA 145760
| |||||| ||||| || ||||| || || | |||| |||||||||| | ||||
Sbjct 658 AGCGGATGGTGCCCAGGTTCTGCTGGTTGGACTTGCGGTTGGCCGCGTCCTTGAACAGCA 717
Query 145761 TGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAAACGGTGCAAGTCCTGCGC 145818
|| | || |||| ||||| | ||||| |||| ||| ||| || | ||||||
Sbjct 718 TGAAGGGCACGCCCGTCTCGATCTGCGCGTCCAGGATGGCGAAC--CACAGCTGCTGCGC 775
Query 145819 ----ACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAA 145874
| | | ||| || |||||| || ||||| ||| ||| ||| |||| |
Sbjct 776 GTTGATGGTCTTGC----GGGCGCGGCCTTCGCGCTCGTACTTCTCGTACAGCGCCTCGA 831
Query 145875 ACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTT-GTTGGGACACATCAGCGACCAT 145933
|| || || |||| | | ||||| | || | ||| ||| || || | || ||||
Sbjct 832 ACTCGTCGCCCCAGCATTTGTACAGGTCCGG-CGCTTCGTTAGGGCAGAACAAACTCCAT 890
Query 145934 ACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAG 145993
||||||||| | ||||||| ||| || | ||| |||||||||| |||||| | || |
Sbjct 891 TTGCCGTTGGCTTCCACGCGCTTCATGAAAAGATCAGGCACCCACAACGCGTAGAACAGG 950
Query 145994 TCGCGCGCTTTGCAATCCTCAGCACCCATGTTTC--GCTTCAAAT-TAAGCACACTATAG 146050
|||||||| | ||| | || || ||| || || | ||| || | | |
Sbjct 951 TCGCGCGCGCGGTGGAGCTC-GTTGCCGTGGTTCTTGC-GCAGGTCCAAGAACTCGA-AC 1007
Query 146051 ATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTT---GCCACCC 146107
| ||| ||||||||||| || | |||| ||||| || || || || || ||| |||
Sbjct 1008 ACGTCGGCGTGCCACGGCTCCAGGTAGATGGCGAAGGAGCCCTTGCGCTTACCGCCGCCC 1067
Query 146108 TGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCT 146167
|||||||||| || || ||| ||| || || |||| |||||| || ||| |||
Sbjct 1068 TGGTCCACGTAGCGCGCCGTGTCGTTGAACACACGCAGCATGGGGATGATGCCATTGGAC 1127
Query 146168 ACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCG 146227
|||||| || | || | || | || ||| | | || | | | | ||||
Sbjct 1128 GAGCCGTTGGTGCCGCGGATGTAGCTGTTGGTGGCGCGGATGTTGTGCATACTGATGCCG 1187
Query 146228 AGACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCA 146287
| ||||| | ||||||| || ||| || | |||||| ||||||||||| |||
Sbjct 1188 ATGCCGCCCGCCCACTTGGAGATGCAGGCACACTGCTTGAGCGTGTCGTAGATGCCCTCA 1247
Query 146288 ATGCTATCGCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCC 146347
||| ||| | ||| | ||||| |||||||| ||| ||||| |||||| ||
Sbjct 1248 ATGGAGTCGTCCTGCATGGCCAGCAGGAAGCACGACGACAGCTGCGGGCGCGGCGTGCCG 1307
Query 146348 GCCGAGAACAACGTCGGGCTCGCGTGCGTAAA 146379
|| ||||| ||| || | |||||||| ||
Sbjct 1308 GCGTTGAACAGCGTGGGCGTGGCGTGCGTGAA 1339
>seq5117
Length=12130
Score = 134 bits (148), Expect = 1e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| ||||||| || ||||| | || | || |||||||| || |||||||| |||||
Sbjct 11901 GCCGCCGCGCAGGCGAAGCACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 11960
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| ||||| |||||| ||||||||||| ||| |||| | ||||||||||| || ||
Sbjct 11961 CAGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGG 12020
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| |||||||||||| | | || | | || | | ||| |
Sbjct 12021 GATGCCCTCCTTGTCTTGGATTTTCTGCTTCACGTTGTCGATCGAGTCCGAAGGCTCCAC 12080
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
||| | || | || || || || ||||| || ||||| |||||||||
Sbjct 12081 GTCCAGCGTGATCGTCTTGCCCGTCAGAGTCTTCACGAAGATCTGCATG 12129
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| ||||| | || | || |||||||| || |||||||| ||||||
Sbjct 11674 CCGCCACGAAGACGAAGCACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 11733
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| ||||||||||| ||| |||| | ||||||||||| || |||
Sbjct 11734 AGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 11793
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| |||||||||||| | | || | | || | | ||| | |
Sbjct 11794 ATGCCCTCCTTGTCTTGGATTTTCTGCTTCACGTTGTCGATCGAGTCCGAAGGCTCCACG 11853
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | || | || || || || ||||| || ||||| |||||||||
Sbjct 11854 TCCAGCGTGATCGTCTTGCCCGTCAGAGTCTTCACGAAGATCTGCATG 11901
>seq1233
Length=22992
Score = 134 bits (148), Expect = 1e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| ||||| | || ||||| | || | || |||||||| || |||||||| |||||
Sbjct 101 GCCGCCGCGAAGGCGAAGCACCAGGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGCT 160
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| ||||| |||||| ||||||||||| ||| |||| | |||||||||||| || ||
Sbjct 161 CAGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGG 220
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| |||||||||||| | | || | | || | | ||| |
Sbjct 221 GATGCCCTCCTTGTCTTGGATTTTCTGCTTCACATTGTCGATCGAGTCCGACGGCTCCAC 280
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
||| | || | || || || || ||||| || ||||| |||||||||
Sbjct 281 GTCCAGCGTGATCGTCTTCCCCGTCAGAGTCTTCACGAAGATCTGCATG 329
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | || ||||| | || | || |||||||| || |||||||| ||||||
Sbjct 4957 CCACCGCGAAGGCGAAGCACCAGGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTC 4898
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| ||||||||||| ||| |||| | |||||||||||| || |||
Sbjct 4897 AGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGG 4838
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| |||||||||||| | | || | | || | | ||| | |
Sbjct 4837 ATGCCCTCCTTGTCTTGGATTTTCTGCTTCACATTGTCGATCGAGTCCGACGGCTCCACG 4778
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | || || || || || || || ||||| ||||||||
Sbjct 4777 TCCAGCGTGATCGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 4731
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| ||||| | || ||||| | || | || |||||||| || |||||||| |||||
Sbjct 329 GCCGCCGCGAAGGCGAAGCACCAGGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGCT 388
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| ||||| |||||| ||||||||||| ||| |||| | |||||||||||| || ||
Sbjct 389 CAGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGG 448
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| |||||||||||| | | || | | || | | ||| |
Sbjct 449 GATGCCCTCCTTGTCTTGGATTTTCTGCTTCACGTTGTCGATCGAGTCCGAAGGCTCCAC 508
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
||| | || | || || || || || || || ||||| ||||||||
Sbjct 509 GTCCAGCGTGATCGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 556
>seq10786
Length=3597
Score = 132 bits (146), Expect = 5e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| ||||||| || ||||| | || | || |||||||| || |||||||| |||||
Sbjct 14 GCCGCCGCGCAGGCGAAGCACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 73
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| ||||| |||||| ||||||||||| ||| |||| | ||||||||||| || ||
Sbjct 74 CAGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGG 133
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| |||||||||||| | | || | | || | | ||| |
Sbjct 134 GATGCCCTCCTTGTCTTGGATTTTCTGCTTCACGTTGTCGATCGAGTCCGAAGGCTCCAC 193
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
||| | || | || || || || ||||| || ||||| ||||||||
Sbjct 194 GTCCAGCGTGATCGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 241
>seq6703
Length=12229
Score = 132 bits (146), Expect = 5e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| ||||| | || | || |||||||| || |||||||| ||||||
Sbjct 11805 CCGCCACGAAGACGAAGCACCAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTC 11864
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| ||||||||||| ||| |||| | |||||||||||| || |||
Sbjct 11865 AGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGG 11924
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| |||||||||||| | | || | | || | | ||| | |
Sbjct 11925 ATGCCCTCCTTGTCTTGGATTTTCTGCTTCACATTGTCGATCGAGTCCGACGGCTCCACG 11984
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | || | || || || || ||||| || ||||| |||||||||
Sbjct 11985 TCCAGCGTGATCGTCTTCCCCGTCAGAGTCTTCACGAAGATCTGCATG 12032
Score = 122 bits (134), Expect = 8e-23
Identities = 117/150 (78%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| ||||| | || ||||| | || | || |||||||| || |||||||| |||||
Sbjct 12032 GCCGCCGCGAAGGCGAAGCACCAGGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGCT 12091
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| ||||| |||||| ||||||||||| ||| |||| | |||||||||||| || ||
Sbjct 12092 CAGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGG 12151
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156
||| || || ||||| ||||||||||||
Sbjct 12152 GATGCCCTCCTTGTCTTGGATTTTCTGCTT 12181
>seq1268
Length=19578
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| ||||| | || | || |||||||| || |||||||| ||||||
Sbjct 229 CCGCCACGAAGACGAAGCACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 170
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| ||||||||||| ||| |||| | ||||||||||| || |||
Sbjct 169 AGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 110
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| |||||||||||| | | || | | || | | ||| | |
Sbjct 109 ATGCCCTCCTTGTCTTGGATTTTCTGCTTCACGTTGTCGATCGAGTCCGAAGGCTCCACG 50
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | || | || || || || ||||| || ||||| |||||||||
Sbjct 49 TCCAGCGTGATCGTCTTGCCCGTCAGAGTCTTCACGAAGATCTGCATG 2
>seq779
Length=1215
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| ||||||| || ||||| | || | || |||||||| || |||||||| |||||
Sbjct 14 GCCGCCGCGCAGGCGAAGCACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 73
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| ||||| |||||| ||||||||||| ||| |||| | ||||||||||| || ||
Sbjct 74 CAGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGCGG 133
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| |||||||||||| | | || | | || | | ||| |
Sbjct 134 GATGCCCTCCTTGTCTTGGATTTTCTGCTTCACGTTGTCGATCGAGTCCGAAGGCTCCAC 193
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
||| | || | || || || || || || || ||||| ||||||||
Sbjct 194 GTCCAGCGTGATCGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 241
>seq10994
Length=1377
Score = 113 bits (124), Expect = 4e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| || || ||||| |||||| ||||||||||| ||| |||
Sbjct 1176 CCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGA 1235
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | |||||||||||| || ||||| ||||| ||||| |||||||||||||| | |
Sbjct 1236 TCAGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATTTTCTGCTTGACATTGT 1295
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | | || | | ||| | ||| | || | ||| || || || || || || || |
Sbjct 1296 CAATGCTGTCCGACGGCTCCACGTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACAA 1355
Query 131225 AAATCTGCATGA 131236
| ||||||||||
Sbjct 1356 AGATCTGCATGA 1367
>seq3516
Length=19581
Score = 93.3 bits (102), Expect = 4e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||||| ||||| ||| | || | || |||||| || |||||||| || |
Sbjct 16849 CCACCGCGCAGACGCAACACCAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGAC 16790
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| ||||||||||| ||| |||| | |||||||||||| || ||
Sbjct 16789 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGA 16730
Query 131128 ATTCCT 131133
||||||
Sbjct 16729 ATTCCT 16724
>seq42
Length=28877
Score = 93.3 bits (102), Expect = 4e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||||| ||||| ||| | || | || |||||| || |||||||| || |
Sbjct 26126 CCACCGCGCAGACGCAACACCAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGAC 26067
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| ||||||||||| ||| |||| | |||||||||||| || ||
Sbjct 26066 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGA 26007
Query 131128 ATTCCT 131133
||||||
Sbjct 26006 ATTCCT 26001
>seq6148
Length=6489
Score = 89.7 bits (98), Expect = 5e-13
Identities = 67/79 (85%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139
||||| ||||||||||| ||| |||| | |||||||||||| || |||||||| || |||
Sbjct 318 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTG 259
Query 131140 TCGGTGATTTTCTGCTTGA 131158
|| ||||||||||||||
Sbjct 258 TCCTGGATTTTCTGCTTGA 240
>seq2466
Length=31792
Score = 89.7 bits (98), Expect = 5e-13
Identities = 67/79 (85%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139
||||| ||||||||||| ||| |||| | |||||||||||| || |||||||| || |||
Sbjct 25622 TCCTCCAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTG 25563
Query 131140 TCGGTGATTTTCTGCTTGA 131158
|| ||||||||||||||
Sbjct 25562 TCCTGGATTTTCTGCTTGA 25544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471942582195840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |