Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sp._20Chile5_20[genbank_20GCA_5F001712635.1_202016- 08-24] 11,901 sequences; 84,445,542 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq7194 187 5e-42 seq2060 187 5e-42 seq10216 170 4e-37 seq1363 154 3e-32 seq5891 105 1e-17 seq3541 102 2e-16 seq2597 102 2e-16 seq848 98.7 2e-15 seq9255 96.9 7e-15 seq6574 96.9 7e-15 seq4718 96.9 7e-15 seq4274 89.7 1e-12 seq11095 84.2 4e-11 seq8062 84.2 4e-11 seq6753 84.2 4e-11 seq4305 84.2 4e-11 seq2596 84.2 4e-11 seq854 84.2 4e-11 >seq7194 Length=30219 Score = 187 bits (206), Expect = 5e-42 Identities = 670/1026 (65%), Gaps = 45/1026 (4%) Strand=Plus/Plus Query 279350 GGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAACTCTAC 279409 ||| ||||| |||| || |||||||| || || ||||| | ||||||||| ||| | Sbjct 11451 GGACCTGTGCAACTGCGAGTTCTCGCTTGCGTACGGTGGTATGATTCTGCTGAACAACGC 11510 Query 279410 CCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAA 279469 || || | | ||||| || |||| || ||||| || || || || ||||| Sbjct 11511 GCGTCTTCGCCTGAAGCGCGGTCACCGTTACGGTCTGTGTGGCCCGAACGGTTGTGGTAA 11570 Query 279470 GAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCATCTGA 279529 | || || |||||||| || || ||||| |||||||| || || || ||| | || Sbjct 11571 GTCGACGCTTATGCGCGCTATCGCCAACGGCCAGCTGGATGGGTTCCCGT-CGCGT--GA 11627 Query 279530 GG---TAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAGCACTGT 279586 || | | ||| |||| || |||||| || | | | ||| | || | || Sbjct 11628 GGACTTGAAGACGGTGTTCGTGGAGCACAACCTGCAGGCGTCTGAGGCCGAGCTGTCGGT 11687 Query 279587 GTTCGACTTCCTAACGTCTGACAATCAGGTTATGGAAATCAGCTCTCCTGAGGAAATCAT 279646 | | |||||| | | | || | || ||| || | | || ||| || || ||| | Sbjct 11688 GGTGGACTTCAT--CTTGTG-CGATGAGGACCTGAAGAACACGCCTCGCGACGAGATCGT 11744 Query 279647 CCAGAAACTGGAGGCCAATGGTTT---TGATGAAA-GAATGCGTAATCTGCCAGTAGGTT 279702 | | |||| | | ||||| || ||| | | | ||| | ||| || || Sbjct 11745 GGACACTCTGGCCGGCGTCGGTTTCACTGCTGAGATGCAGGCGCAG---GCC-GTGGGCA 11800 Query 279703 CTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCG 279762 | || ||||| |||||||||||||| ||| || | |||||||| || | | |||| Sbjct 11801 CGCTTTCGGGCGGTTGGAAGATGAAATTGGAGCTGGCCCGCGCCATGCTGCAGAAGGCCG 11860 Query 279763 ATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAG 279822 || |||| ||||| |||||||| || |||||| |||| | ||||| || ||||| | Sbjct 11861 ATATCCTGCTGCTCGATGAGCCGACGAACCACTTGGATGTGAAGAACGTGGCGTGGCTGG 11920 Query 279823 TGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCT 279882 | |||||| | ||| ||| || | | |||| || || ||||||||||||| Sbjct 11921 AGAACTACCTGGTGAACCTGCCGAACGTGACGAGCATCATGGTGTCCCACGACTCTGGCT 11980 Query 279883 TCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAG---CAAAATCTGAAGCTCTCCA 279939 |||| || | |||||| | |||||| ||||| ||| | || |||||| | || Sbjct 11981 TCCTCGACACGGTGTGCACGAACATCATCCACTACGAGACCCGCAAGCTGAAGACGTACA 12040 Query 279940 AGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCGCCTACTATG 279999 || ||||||||||| ||||||| | || ||||| || ||||| | Sbjct 12041 AG------GGCAACCTGTCGAAGTTCGTGGAGGTGAAGCCGGAGGCTAAGGCGTACTACG 12094 Query 280000 ACCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGGAGGGCATCA 280059 | ||| ||| |||||| ||||| ||||| ||||| || || || | | |||| Sbjct 12095 AGCTGGAGGCCGCCACGTTCAAGTTCACGTTCCCGGAGCCTGGTTTCCTTGCTGATATCA 12154 Query 280060 C-ATCAAAGGATCGCGCAATCATGAAGCTCCGTGGCGTCTCCTTTGCTTATCCCAATGGC 280118 | ||| || || | ||||| || | | | | | || || | || Sbjct 12155 AGAACAAGGGCAAGC-CGATCATTCGTCTGACGAACTGCACGTACACGTACCCTGGTCGC 12213 Query 280119 CCCAA--CATCT-TCAGCAGTGTCAACTCGCAG--GTT---TCTAT-GAACTCACGGATT 280169 || | ||| ||| || || |||| | || ||| | || | || || Sbjct 12214 GAGAAGCCGTCTATCAACAA---CATCTCGGTGACGTGCGCTCTGTCGAGC---CGTATC 12267 Query 280170 GGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAG 280229 | ||| |||| || || ||||| ||||||||||| | ||||| | |||||||| ||| Sbjct 12268 GCTGTGCTTGGGCCGAACGGTGCCGGTAAGTCTACGATGATCAAGATGCTGACTGGTGAG 12327 Query 280230 ACCCAGGCCACTGAGGGGTCCG-TTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGC 280288 | || |||| || |||| || | |||||||| || ||||| | || |||||||| Sbjct 12328 GTCGAGCCCAC-GACGGGTACGCTGTGGAAGCACCCTTCGATGCGTTTCGCGTACGTCGC 12386 Query 280289 TCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCA 280348 ||||||||| ||||||||||| ||| ||||||| || ||| | ||||| ||||| || Sbjct 12387 TCAGCACGCGTTCCACCACATTGAGGACCACCTTGATGACACTGCGAACCAGTACATCCA 12446 Query 280349 GTGGCG 280354 |||||| Sbjct 12447 GTGGCG 12452 Score = 93.3 bits (102), Expect = 9e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 280680 GGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAG 280739 ||||||| | ||||||| || ||||| || || || |||||||| || ||||||||| Sbjct 12790 GGTCTGGGCGCCGAGTTCGGTACCCACTCGCGTATGCGTGGTCTTTCGGGTGGCCAGAAG 12849 Query 280740 GTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAG 280799 || || |||| | | || || |||||| |||| ||| | | || || || ||| Sbjct 12850 GTGAAGGTTGTGCTGGCTGCTGCCATGTGGCTGAACCCGCACATCCTTGTGCTTGATGAG 12909 Query 280800 CCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838 ||||| ||||| ||||| ||||| ||||| |||||| Sbjct 12910 CCTACGAACTACCTGGATCGCGACTCGCTGGGTGCTCTG 12948 >seq2060 Length=42285 Score = 187 bits (206), Expect = 5e-42 Identities = 537/819 (66%), Gaps = 14/819 (2%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||||| ||| ||||| | ||||| ||||||| ||||| || Sbjct 32124 TCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATCATGTCCATCCAGTCGAACGGGTTCTTG 32183 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGC-TACGAAGATGCGGTCTGCCACAAACTCCAG 251681 || ||||| ||||| ||| || | ||| | | |||||| ||||| ||||| | Sbjct 32184 GCGTTGTAGATCTTGGACACGCCCAGCGAGTAC-AGCAGGCGGTCGGCCACGAACTCAAT 32242 Query 251682 ATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATA-CGACAAGGAATTGCCTCACAGA 251740 ||||| | ||| || | ||||||||||| |||| | ||| || | | || | | Sbjct 32243 GTACTGGCACATGAGCGCCGAGTTCATGCCGATCAGCTCCACA-GGCAGCGAGTCCCGCA 32301 Query 251741 TGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACA 251800 ||| || | ||| | | || || || | ||| || | ||| | || | || Sbjct 32302 CGAACTCGTGCTCGATCACCACGGCGTCGCGGATAATGGCGTGCACACGCTCCTCCGGCA 32361 Query 251801 GCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGC 251860 |||||||| | ||||| ||||||| ||| | | || | ||||| || ||||| | Sbjct 32362 GCTTGTTCACGAGCTTCGAGTACATGAGGCAGGCGAAGTCGCAGTGCATGCCTTCGTCAC 32421 Query 251861 GACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGA 251920 ||||||| | ||||||||| | | ||||||||||| | || || ||| | ||||||| Sbjct 32422 GACTGATCAGCTCGTTGGAGAAGCTGAGGCCAGGCATGAGGCCGCGCTTCTTCAGCCAGA 32481 Query 251921 AGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGC 251980 |||| | ||| ||||| || ||||| | | || || || | | | || | | | Sbjct 32482 AGATGGAGCAGAAGGAGCCCGAGAAGAAGATGCCTTCCACGGCCGCGAACGCCAGCAAAC 32541 Query 251981 GCTCAGCAAACGACTTGTCCTGCGACA-----AGAACTTCTGTGCCCATGCTGCCTTCTT 252035 |||| ||| |||| | | ||| | | |||| | ||||| |||||||| Sbjct 32542 GCTCCGCATACGA--GGCCGAGCGCGAGTCGCACCACTTGAGCGCCCAACTGGCCTTCTT 32599 Query 252036 TCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCTC 252095 || ||||| || ||||| || | ||| || | ||| | ||||| Sbjct 32600 GGTCACGCACGGGATGGTCTCGATGGCGCGCAGCAGATGGTCCTTCTCCACCGTGTCCTT 32659 Query 252096 GATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCTG 252155 ||| || || | || || ||||| | |||||| |||||| ||| || ||||| Sbjct 32660 AATGTACGTGTCGATGAGCAGCGAGTAGACCTCCGAGTGGATGTTCTCGATGGCGATCTG 32719 Query 252156 GTAAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGTTGTTTGCAAT 252215 | | | ||||| ||||| || | ||||| || ||||| | || | Sbjct 32720 GAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACTTCGCTGCTGAAGTTCATGGCCAG 32779 Query 252216 GTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGATGAAGTG 252275 |||||| |||| ||||| |||||| | || |||||| | || | | |||||||||| | Sbjct 32780 GTTCTCGTTCACGATGCCGTCGCTGGCGGCGAAGAAGGCCAGCACGTGCTTGATGAAGCG 32839 Query 252276 ACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTCAGAGGAACTTC 252335 ||||||| |||| |||| ||| | |||||| | ||| || |||| | || Sbjct 32840 GCGCTCATTGTCGGTGAGGTTG---CCCCAGTCCTTGAGGTCGTGCACCAGATCCAGCTC 32896 Query 252336 TTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACAT 252374 || | |||||||| ||| | | |||||||||||||| Sbjct 32897 CTCGGCGGTCCAGAAGCTGGCCTCGGCCTTCTTGTACAT 32935 >seq10216 Length=39351 Score = 170 bits (188), Expect = 4e-37 Identities = 668/1029 (65%), Gaps = 51/1029 (5%) Strand=Plus/Plus Query 279350 GGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAACTCTAC 279409 ||| |||||| |||| || |||||||| || || ||||| | ||||||||| ||| | Sbjct 20468 GGACCTGTGTAACTGCGAGTTCTCGCTTGCGTACGGTGGTATGATTCTGCTGAACAACGC 20527 Query 279410 CCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAA 279469 || || | | |||||||| |||| || ||||| || ||||| || || || Sbjct 20528 GCGTCTTCGCCTGAAGCGTGGTCACCGTTACGGTCTGTGTGGCCCCAACGGTTGTGGCAA 20587 Query 279470 GAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACG-CATCTG 279528 | || || |||||||| ||||| ||||| |||||||| || ||||| || || | Sbjct 20588 GTCGACGCTGATGCGCGCTATTGCCAACGGCCAGCTGGATGG-TTTCC---CGTCAAAGG 20643 Query 279529 AGG---TAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAGCACTG 279585 ||| | | ||| |||| || |||||| || | | | ||| | || | | Sbjct 20644 AGGACCTGAAGACTGTGTTCGTCGAGCACAACCTGCAGGCGTCTGAGGCCGAGCTGTCCG 20703 Query 279586 TGTTCGACTTCCTAACGTCTGACAATCAGGTTATGGAAATCAGCTCTCCTGAGGAAATCA 279645 || | |||||| | | |||| | | ||| || | | || ||| |||| | Sbjct 20704 TGGTGGACTTCAT--CTTCTGTGA-TGAGGACTTGAAGAGCACTCCTCACCAGGAGGTTG 20760 Query 279646 TCCAGAAACT--GGAGGCCAATGGTTT---TGATGAAAGAATGCGTAATCTGCCAGTAGG 279700 || | | || | || | ||||| || ||| | ||| | | | || || Sbjct 20761 TCGACACTCTCAGCAG--CGTCGGTTTCACTGCTGAGA---TGCAGGTGCAGGCCGTGGG 20815 Query 279701 TTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGC 279760 | || |||||||||||||||||||| ||| || |||| || || || | | || Sbjct 20816 CACCCTTTCGGGTGGTTGGAAGATGAAATTGGAGCTGGCTCGTGCTATGCTGCAGAAGGC 20875 Query 279761 CGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCT 279820 |||| |||| |||||||||||||| || |||||| |||| | ||||| || ||||| Sbjct 20876 CGATATCCTCCTGCTTGATGAGCCGACGAACCACTTGGATGTGAAGAACGTCGCTTGGCT 20935 Query 279821 AGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGG 279880 | | |||||| | ||| ||| || | | |||| || || ||||||||||| Sbjct 20936 GGAGAACTACCTGGTGAACCTGCCGAACGTGACGAGCATCATGGTGTCCCACGACTCTGG 20995 Query 279881 CTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAG---CAAAATCTGAAGCTCTC 279937 ||||| || | |||||| | |||||| ||||| ||| | || |||||| Sbjct 20996 GTTCCTGGACACGGTGTGCACGAACATCATCCACTACGAGACCCGCAAGCTGAAG----- 21050 Query 279938 CAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCGCCTACTA 279997 | | ||| ||||||||||| ||||||| | || ||||| || ||||| Sbjct 21051 -ACGTACAAGGGCAACCTGTCGAAGTTCGTGGAGGTGAAGCCGGAGGCTAAGGCGTACTA 21109 Query 279998 TGACCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGGAGGGCAT 280057 || ||| ||| ||||| ||||| ||||| ||||| || || || | | || Sbjct 21110 CGAGCTGGAGGCTGCCACGTTCAAGTTCACGTTCCCGGAGCCTGGTTTCCTTGCCGATAT 21169 Query 280058 C-ACATCAAAGGATCGCGCAATCATGAAGCTCCGTGGCGTCTCCTTTGCTTATCCCAATG 280116 | | | ||| || || | ||||| || | | | | | || || || Sbjct 21170 CAAGAACAAGGGTAAGC-CGATCATTCGTCTGACGAACTGCACGTACACGTACCC---TG 21225 Query 280117 GCCCCAACA-----TCT-TCAGCAGTGTCAACTCGCAGGT---TTCTAT-GAACTCACGG 280166 ||| | ||| ||| ||| || || || | || ||| | || | || Sbjct 21226 GCCGCGACAAACCGTCTATCAACAACATC-TCTGTGACGTGCGCTCTGTCGAGC---CGT 21281 Query 280167 ATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGC 280226 || | ||| |||| || || ||||| |||||||| || | ||||| | |||||||| Sbjct 21282 ATCGCTGTGCTTGGCCCGAACGGTGCCGGTAAGTCGACGATGATCAAGATGCTGACTGGT 21341 Query 280227 GAGACCCAGGCCACTGAGGGGTCCG-TTTGGAAGCATCCCAACATGCGGATGGCTTACGT 280285 ||| | || |||| || |||| || | |||||||| || ||||| | || ||||| Sbjct 21342 GAGGTCGAGCCCAC-GACGGGTACGCTGTGGAAGCACCCTTCTATGCGTTTCGCATACGT 21400 Query 280286 CGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACAT 280345 ||||||||||| ||||||||||| ||| ||||||| || ||| | ||||| ||||| Sbjct 21401 TGCTCAGCACGCGTTCCACCACATTGAGGACCACCTTGATGACACTGCGAACCAGTACAT 21460 Query 280346 TCAGTGGCG 280354 |||||||| Sbjct 21461 CCAGTGGCG 21469 Score = 89.7 bits (98), Expect = 1e-12 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 280680 GGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAG 280739 || |||| | ||||||| || ||||| || || || |||||||| || ||||||||| Sbjct 21807 GGCCTGGGCGCCGAGTTCGGTACCCACTCGCGTATGCGTGGTCTTTCGGGTGGCCAGAAG 21866 Query 280740 GTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAG 280799 || || | || | || || || |||||| |||| ||| | | || || |||||| Sbjct 21867 GTGAAGGTGGTGCTGGGTGCTGCCATGTGGCTGAACCCGCACATCCTTGTGCTTGACGAG 21926 Query 280800 CCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838 || || ||||| ||||| ||||| ||||| |||||| Sbjct 21927 CCGACGAACTACCTGGATCGCGACTCGCTGGGTGCTCTG 21965 >seq1363 Length=31850 Score = 154 bits (170), Expect = 3e-32 Identities = 534/821 (65%), Gaps = 18/821 (2%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||||| ||| ||||| | ||||| ||||||| ||||| || Sbjct 10190 TCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATCATGTCCATCCAGTCGAACGGGTTCTTG 10131 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGC-TACGAAGATGCGGTCTGCCACAAACTCCAG 251681 || | ||| ||||| ||| || | ||| | | ||||| ||||| ||||| | Sbjct 10130 GCGTGGTAGATCTTGGACACGCCCAGCGAGTAC-AGCAGCCGGTCGGCCACGAACTCAAT 10072 Query 251682 ATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATA-CGACAAGGAATTGCCTCACAGA 251740 ||||| | ||| || | ||||||||||| || | | || || | | || | | Sbjct 10071 GTACTGGCACATGAGCGCCGAGTTCATGCCGATGAGCTCCACC-GGCAGCGAGTCCCGCA 10013 Query 251741 TGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACA 251800 ||| || | ||| | || || || | ||| | ||| | || | || Sbjct 10012 CGAACTCGTGCTCGATCAACACGGCGTCGCGTATAATGCTGTGCACACGCTCCTCCGGCA 9953 Query 251801 GCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGC 251860 |||||||| | || || ||||||| ||| | |||| | ||||| || ||||| | Sbjct 9952 GCTTGTTCACGAGTTTCGAGTACATGAGGCAGGCAAAGTCGCAGTGCATGCCTTCGTCAC 9893 Query 251861 GACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGA 251920 ||||||| | ||||||||| | | ||||||||||| | || || ||| | ||||||| Sbjct 9892 GACTGATCAGCTCGTTGGAGAAGCTGAGGCCAGGCATGAGGCCGCGCTTCTTCAGCCAGA 9833 Query 251921 AGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATG-CAACAAGG 251979 |||| | ||||||||| || ||||| | | || || || | | | | |||||| Sbjct 9832 AGATGGAGCAAAAGGAGCCGGAGAAGAAGATGCCTTCCACGGCCGCGAAGGCCAACAA-A 9774 Query 251980 CGCTCAGCAAACGACTTGTCCTGCGACA-----AGAACTTCTGTGCCCATGCTGCCTTCT 252034 ||||||||| |||| | | ||| | | |||| | ||||| ||||||| Sbjct 9773 CGCTCAGCATACGA--GGCCGAGCGCGAGTCGCACCACTTGAGCGCCCAACTGGCCTTCT 9716 Query 252035 TTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCT 252094 | || ||||| || ||||| || | ||| | | ||| | |||||| Sbjct 9715 TGGTCACGCACGGGATGGTCTCGATGGCGCGCAGCAGATGATCCTTCTCCACCGCGTCCT 9656 Query 252095 CGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCT 252154 ||| || || | || || ||||| | |||||| |||||| ||| || |||| Sbjct 9655 TAATGTACGTGTCGATGAGCAGCGAGTAGACCTCCGAGTGGATGTTCTCGATGGCGATCT 9596 Query 252155 GGTAAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGTTGTTTGCAA 252214 || | | ||||| ||||| || | ||||| || ||||| | || | Sbjct 9595 GGAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACTTCGCTGCTGAAGTTCATGGCCA 9536 Query 252215 TGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAA-GCCAAGAATGGTCTTGATGAAG 252273 |||||| |||| ||||| |||||| | || ||||| ||||| | | |||||||||| Sbjct 9535 AGTTCTCGTTCACGATGCCGTCGCTGGCGGCGAAGAACGCCAA-CACGTGCTTGATGAAG 9477 Query 252274 TGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTCAGAGGAACT 252333 || ||||| | ||| ||| ||| | |||||| | ||| || |||| | Sbjct 9476 TGGCGCTCGTTGTCCGAGAGGTTGGC---CCAGTCCTTCAGGTCGTGCACCAGATCCAGC 9420 Query 252334 TCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACAT 252374 || || | |||||||| ||| | | |||||||||||||| Sbjct 9419 TCCTCGGCGGTCCAGAAGCTGGCCTCGGCCTTCTTGTACAT 9379 >seq5891 Length=34621 Score = 105 bits (116), Expect = 1e-17 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 218656 AAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAG 218715 |||||||| ||||| |||||||||| || ||| || | || || ||||| ||| | Sbjct 14522 AAGGTCGCGCAGTTGGCTGGTTATGTCTCGGAACACTCGGCGTATCACCACGGAGAGGTG 14463 Query 218716 AGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAAC 218775 |||||||||||| |||| || |||||| || || | ||||||||| |||||||| || Sbjct 14462 AGTCTGCAGGGTACCATCGTGAACATGGCCCAAGATTTTGTGGGCAGCAACAACATCCAC 14403 Query 218776 TTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGAT 218826 | ||| || | || ||||| ||| | || || |||| || |||||| Sbjct 14402 CTCCTGTCGCCGATTGGCCAGTTCGGTACGCGACTGATGGGCGGCAAGGAT 14352 >seq3541 Length=16018 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 264 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 205 Query 142563 CCCCAC 142568 |||||| Sbjct 204 CCCCAC 199 >seq2597 Length=1273 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 781 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 722 Query 142563 CCCCAC 142568 |||||| Sbjct 721 CCCCAC 716 Score = 84.2 bits (92), Expect = 4e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTT 142558 |||||| |||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 56 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTT 1 >seq848 Length=74974 Score = 98.7 bits (108), Expect = 2e-15 Identities = 169/245 (69%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 294199 TCCACGCGCTTCATGAATAGATCATTGACCCACATTGCGTAAAACAAGTTGCGGGCGCGC 294258 ||||||||||||||||| |||||| ||||||| ||||| |||| || ||| ||||| Sbjct 17187 TCCACGCGCTTCATGAACAGATCAGGCACCCACAACGCGTAGAACAGGTCGCGCGCGCGG 17246 Query 294259 AGGCTCTCCTCACCTTGATTACGACGGAGGAGCAGGAAGTCCATGATGTCGGGATGATGG 294318 || ||| | || || || || ||| |||||| || | | ||||| || Sbjct 17247 TGGAGCTCGTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAACACGTCGGCGTGCCAC 17306 Query 294319 GGTTCCAGATACACAGCAAAGGACCCCTT---CCTGCGTCCCCCCTGGTTGGCGTAGGCA 294375 || ||||| || | || ||||| ||||| | ||| || ||||||| ||||| Sbjct 17307 GGCTCCAGGTAGATGGCGAAGGAGCCCTTGCGCTTGCCGCCGCCCTGGTCCACGTAGCGC 17366 Query 294376 GATGTGGTGTCAAACACCTTCAGCATAGGCACGATGCCATCGGACTCACCATTGGTTCCG 294435 | ||| || ||||| |||||| || | |||||||| |||| || ||||| ||| Sbjct 17367 GCCGTGTCGTTGAACACACGCAGCATGGGGATGATGCCATTGGACGAGCCGTTGGTGCCG 17426 Query 294436 CGAAT 294440 || || Sbjct 17427 CGGAT 17431 >seq9255 Length=18854 Score = 96.9 bits (106), Expect = 7e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 218656 AAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAG 218715 ||||| || ||||| |||||||||| || || || | || || ||||| ||| | Sbjct 15427 AAGGTTGCGCAGTTGGCTGGTTATGTCTCGGAGCACTCGGCGTATCACCACGGAGAGGCG 15368 Query 218716 AGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAAC 218775 ||||||||||| |||| || |||||| || || | |||||||||||||||||| || Sbjct 15367 AGTCTGCAGGGCACCATCGTGAACATGGCCCAAGATTTTGTGGGCAGTAACAACATCCAC 15308 Query 218776 TTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATTGGGTGGAAAGGAT 218826 | || || | || ||||| ||| | || ||| |||| || |||||| Sbjct 15307 CTCTTGTCGCCGATTGGCCAGTTCGGTACGCGACTAATGGGCGGCAAGGAT 15257 >seq6574 Length=4645 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| ||||||||||||| ||||||||||||| ||| Sbjct 6 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTGGAG 65 Query 142563 CCCCAC 142568 |||||| Sbjct 66 CCCCAC 71 >seq4718 Length=1338 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| ||||||||||||| ||||||||||||| ||| Sbjct 81 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTGGAG 22 Query 142563 CCCCAC 142568 |||||| Sbjct 21 CCCCAC 16 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| ||||||||||||| ||||||||||||| ||| Sbjct 626 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTGGAG 567 Query 142563 CCCCAC 142568 |||||| Sbjct 566 CCCCAC 561 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| ||||||||||||| ||||||||||||| ||| Sbjct 1321 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTGGAG 1262 Query 142563 CCCCAC 142568 |||||| Sbjct 1261 CCCCAC 1256 >seq4274 Length=4240 Score = 89.7 bits (98), Expect = 1e-12 Identities = 167/245 (68%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 294199 TCCACGCGCTTCATGAATAGATCATTGACCCACATTGCGTAAAACAAGTTGCGGGCGCGC 294258 ||||||||||||||||| |||||| ||||||| ||||| |||| || ||| ||||| Sbjct 903 TCCACGCGCTTCATGAAAAGATCAGGCACCCACAACGCGTAGAACAGGTCGCGCGCGCGG 962 Query 294259 AGGCTCTCCTCACCTTGATTACGACGGAGGAGCAGGAAGTCCATGATGTCGGGATGATGG 294318 || ||| | || || || || ||| || ||| || | | ||||| || Sbjct 963 TGGAGCTCGTTGCCGTGGTTCTTGCGCAGGTCCAAGAACTCGAACACGTCGGCGTGCCAC 1022 Query 294319 GGTTCCAGATACACAGCAAAGGACCCCTT---CCTGCGTCCCCCCTGGTTGGCGTAGGCA 294375 || ||||| || | || ||||| ||||| | | | || ||||||| ||||| Sbjct 1023 GGCTCCAGGTAGATGGCGAAGGAGCCCTTGCGCTTACCGCCGCCCTGGTCCACGTAGCGC 1082 Query 294376 GATGTGGTGTCAAACACCTTCAGCATAGGCACGATGCCATCGGACTCACCATTGGTTCCG 294435 | ||| || ||||| |||||| || | |||||||| |||| || ||||| ||| Sbjct 1083 GCCGTGTCGTTGAACACACGCAGCATGGGGATGATGCCATTGGACGAGCCGTTGGTGCCG 1142 Query 294436 CGAAT 294440 || || Sbjct 1143 CGGAT 1147 >seq11095 Length=1281 Score = 84.2 bits (92), Expect = 4e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564 |||| ||||||||||||||||||||| | || |||| | |||||||||||||||||||| Sbjct 209 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 268 Query 142565 CCAC 142568 |||| Sbjct 269 CCAC 272 >seq8062 Length=1108 Score = 84.2 bits (92), Expect = 4e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564 |||| ||||||||||||||||||||| | || |||| | |||||||||||||||||||| Sbjct 237 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 296 Query 142565 CCAC 142568 |||| Sbjct 297 CCAC 300 >seq6753 Length=1627 Score = 84.2 bits (92), Expect = 4e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564 |||| ||||||||||||||||||||| | || |||| | |||||||||||||||||||| Sbjct 273 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 214 Query 142565 CCAC 142568 |||| Sbjct 213 CCAC 210 >seq4305 Length=1080 Score = 84.2 bits (92), Expect = 4e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564 |||| ||||||||||||||||||||| | || |||| | |||||||||||||||||||| Sbjct 209 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 268 Query 142565 CCAC 142568 |||| Sbjct 269 CCAC 272 >seq2596 Length=1028 Score = 84.2 bits (92), Expect = 4e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564 |||| ||||||||||||||||||||| | || |||| | |||||||||||||||||||| Sbjct 576 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 517 Query 142565 CCAC 142568 |||| Sbjct 516 CCAC 513 >seq854 Length=1298 Score = 84.2 bits (92), Expect = 4e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564 |||| ||||||||||||||||||||| | || |||| | |||||||||||||||||||| Sbjct 209 CCCGTCTAGCTCAGTCGGTAGAGCGCTGGCCTTTTAAGCCAGTGGTCGTGGGTTCGAGCC 268 Query 142565 CCAC 142568 |||| Sbjct 269 CCAC 272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027680073838741