Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sp._20Chile5_20[genbank_20GCA_5F001712635.1_202016- 08-24] 11,901 sequences; 84,445,542 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq848 526 4e-144 seq4274 453 2e-122 seq2060 403 3e-107 seq1363 374 2e-98 >seq848 Length=74974 Score = 526 bits (582), Expect = 4e-144 Identities = 1420/2130 (67%), Gaps = 102/2130 (5%) Strand=Plus/Plus Query 243775 CAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAG 243834 || |||||||||||| |||||||| || | |||||||| || |||||||| ||| || Sbjct 15998 CATGTAGTACATGCCCGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATGGACGTGAG 16057 Query 243835 CTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTG 243894 ||| | || | ||||||| | | || ||| || ||||||||||| Sbjct 16058 CTTGCTGATGGT------TGGGTCGGCGATGTGCAC------GTTCAGCGACTGGCTCTG 16105 Query 243895 GTCGACGAAGGGCGCC-CGCTCTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCAT 243953 | || | ||| |||| || || || | || | | | |||||| ||||| Sbjct 16106 GCAGATGTAGG-CGCCGCGGTCCGCCGACAGGTCCAGCACCGTCTTCTGCTTGATCTCCC 16164 Query 243954 ACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGC 244013 || |||||||||| | ||||| |||| |||| | | | ||||||||||||| Sbjct 16165 ACACCGTCTTGTACTTCTCCTTGATGTGCGGCGGGATCACGCTCACCTTCTGCACCGAGC 16224 Query 244014 CCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCA--- 244070 | || | || |||| | |||| | |||||| ||||| |||| | Sbjct 16225 CGCCGTCATTCAGGATCTGGTTACGCACCTCGGGCGTCCACACGCCCA---GCTCAATGA 16281 Query 244071 GCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGT 244130 || ||| | ||||| | ||||||| | | ||||| |||| |||||||||||| | || Sbjct 16282 GCTCCTTCATCAGGTACTTGTTCACGATCGTGAACTCGCCCGCCAGCACGCGGCGGTTGT 16341 Query 244131 AGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCG 244190 | | |||| || ||||||||| ||||| |||||||||| |||||||||||| || Sbjct 16342 ACATGTTGGACGTGTACGGCTCGATACTCTCGTTGTTGCCCAGGATCTGCGCCGTGGACG 16401 Query 244191 CAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGA--TGCGGAG 244248 | || ||||| |||| |||||||| ||| | | |||||| | | | | Sbjct 16402 CCGTGGGCATCGGCGCGACCAGCAGCGAGTTGCGAAGCCCGTGCTGCGCCACCTTGGCCT 16461 Query 244249 TCTGAGCTCGTTCCAGTCCCACATGCCCGA-GAGGTCCTCGCGTTTGAGGCCCCACATGT 244307 || |||| || ||||||||| | ||||| || | | || || |||||||||| Sbjct 16462 TCAGAGC-CGC-CCAGTCCCAGAGACCCGACGACGGCGTCACG-------CCCCACATGT 16512 Query 244308 CAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGC 244367 | ||||| | | ||||||||| | ||| ||| ||||| ||| |||||| || || Sbjct 16513 CGAACTGGAAGATGCCCTTGCTGGCAGGGGAGCCTTCGTACGTCTCGTAGGGCCCTTCAT 16572 Query 244368 GCTGGGCCAGCTTACA-GCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATC 244426 | ||| | || || | | || | ||||||||||||||||||||||||||| || Sbjct 16573 CTTTGGCGAT-TTCCATGGACGTCTCCATGGCGGCGTAGTAGATGGTCTCGAAGATGTTC 16631 Query 244427 TTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCG 244486 ||||| | || || |||| | | | ||| | || | |||||| |||||| |||| Sbjct 16632 TTGTTGAGCTCCCGCGCCTCGGCACTCTCGAACGCGAAGTCCATCAGGATGAAGGCGTCC 16691 Query 244487 GCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGA---GCGCATGGCT 244543 ||||||||||| || |||||||| | ||| | ||| ||| ||||||| |||| || Sbjct 16692 GCCAGTCCCTGTACACCGATGCCCACGGGGCGGTGGCGCATGTTGGACTTGCGC---GCC 16748 Query 244544 TCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCA--TGC 244601 || |||||||| || ||||| ||||||| |||||||| |||||||| |||| || | | Sbjct 16749 TCTGGCACGGGATAGTAGTTGACGTCGATGACCTTGTTCAGGTTGCGCGTGACCACCTTC 16808 Query 244602 GGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCC 244661 | ||| ||| |||| || ||| | | || | || || Sbjct 16809 GT--GACCTCGTACAGCTTCTTGTAGTTGAATACGCCG---TCTTC-------------- 16849 Query 244662 TCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGG 244721 ||| |||| | || || || ||||||||||| ||||||||||| || | | Sbjct 16850 -CACGAACTTGGGCAGCGCCACAGACGCCAGGTTGCACACGGCCACCTCATCGGGCGCCG 16908 Query 244722 TGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGAT 244781 |||||| | | |||| ||| | ||| || | |||||||||||||| ||| || | Sbjct 16909 TGTACTCCATGACCTCGCAGCACAAGTTGCTCGAGCGGATGGTGCCCAGGTTCTGCTGGT 16968 Query 244782 TGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGG 244841 |||||||| |||| ||||||||| | ||||||||||| | || ||||||| ||| | Sbjct 16969 TGGACTTGCGGTTGGCCGCGTCCTTGAACAGCATGAAGGGAACGCCCGTCTCGATCTGCG 17028 Query 244842 CGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTG 244901 || | |||| | | ||| || | | || |||| ||| |||| || ||| || Sbjct 17029 CGTCCAGGATGGCGAACCACAGCTGCTGCGCGTTGATGGTCTTGCGGGCGCGGCCTTCGC 17088 Query 244902 CCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGG-CCGGGG 244960 |||||| |||||| |||||||||||| ||||||| || || ||| |||| | Sbjct 17089 GCTCGTACTTCTCGTACAGCGCCTCGAACTCGTCGCCCCAGCACTTGTACAGGTCCGGCG 17148 Query 244961 C-ACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAG 245019 | || | ||||| | |||||||||| |||| | | | || | || |||||| || Sbjct 17149 CTTCGTTG--GGGCAAAACAGACTCCACTTGCCGTTGGCTTCCACGCGCTTCATGAACAG 17206 Query 245020 GTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCT---GCTCGTCCGAGCCAGT 245076 || || | ||| | || | ||| ||||| | | | | |||||| ||| Sbjct 17207 ATCAGGCACCCACAACGCGTAGAACAGGTCGCGCGCGCGGTGGAGCTCGT---TGCCGTG 17263 Query 245077 GTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGC 245136 |||||| | ||| |||| || || || |||||| ||||||| ||||||| ||||| || Sbjct 17264 GTTCTTGCGCAGGTCCAGGAACTCGAACACGTCGGCGTGCCACGGCTCCAGGTAGATGGC 17323 Query 245137 GAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGCGTTGAAGAT 245196 || || ||| |||||| ||| ||||||||||| | | | ||||||| | Sbjct 17324 GAAGGAGCCCTTGCGCTTGCCGCCGCCCTGGTCCACGTAGCGCGCCGTGTCGTTGAACAC 17383 Query 245197 GCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTT 245256 ||||| | || | ||||| || || |||||||||||| ||||||| | | Sbjct 17384 ACGCAGCATGGGGATGATGCCATTGGACGAGCCGTTGGTGCCGCGGATGTAGCTGTTGGT 17443 Query 245257 GCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCA 245316 | | | || |||| ||| ||||| | |||||||| |||||||||| || || Sbjct 17444 GGCGCGGATGTTGTGCATGCTGATGCCGATGCCGCCGGCCCACTTGGAGATGCACGCACA 17503 Query 245317 GCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCA 245376 ||||| ||||| |||||||| ||| ||| || |||| ||||| ||||| Sbjct 17504 CTGCTTGAGCGTGTCGTAGATGCCCTCAATGGAGTCGTCCTGCATGGCCAGCAGGAAGCA 17563 Query 245377 GGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAA 245436 || |||||||| ||| || ||| | ||||||||| ||||| ||||||| || || Sbjct 17564 CGACGACAGCTGCGGCCGCGGCGTGCCGGCGTTGAACAGCGTGGGCGTGGCGTGCGTGAA 17623 Query 245437 GTAGCGGCT-CGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTT-GTCGCCGTGG 245494 | | | || ||| | || | |||| |||| ||| || | |||||| ||| |||| Sbjct 17624 G-AACTTCTGCGACATGAGCTCGTAGGTCTCCAGCGCCGCCTTGATGTTCGTC-TTGTGG 17681 Query 245495 ATCTGCAGGGCGCAC-CTCATGAGGGTGTGCTG-GGGCGTCTCGATGGGTCCCT-CGGGT 245551 || ||| || ||| | ||||| | ||||| || ||| |||| || | | | | Sbjct 17682 ATGCCCAGCGC-CACGCGCATGATGAGCTGCTGCGGACGT-TCGA--CCACCTTGCCGTT 17737 Query 245552 C-CCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTC 245610 | | || | |||| |||||||||||||||||| || ||||| ||| | ||||| Sbjct 17738 CACGCGGAAGAGGTAGCCGCGCTCGAGCGTCTTGAAGCCGAAGTAGTCGTACTCGAAGTC 17797 Query 245611 GGCGTGGTGCCTGACGGCTGCGTCGAGTCTC-TCGGCGTGCTTC-TGACTGACCTCGTAA 245668 | || ||| ||| ||| | || || ||| || ||||| | | || || |||||| Sbjct 17798 GCGGTCGTGGATGATGGCCGAGTTCAG-CTCGTCCTTGTGCTGCATCAC-GATCTCGTAC 17855 Query 245669 AACTTTTGCGCTATGAGGGGAGCC-CTGAGCCCG-----GTGTCCGGATTGACGTTGAAC 245722 | | | || || || || ||| | | ||||| || | |||| || || | Sbjct 17856 ACGTCGTCGGCGATCAGCGGCGCCGCGGCGCCCGTCTTCTCGTGCACATTG-CGGTGGAA 17914 Query 245723 CAGAGC-CTCTTGCACACCTCCGAGAACTTGGGGCTGGTGAGCTTATGCAGGTTGGTGAC 245781 ||| | | ||| ||| ||| ||| | ||||| ||| |||||||| | ||| Sbjct 17915 CAGCTCGATGTTG-TCAC--TGAAGACCTT---GTTGGTGTTCTTGTGCAGGTTCGAGAC 17968 Query 245782 TGCTATGCGCGCCGCCAACTTGCTGTAGTCGGGGTGAGTGGTGGTCATGTTGGAGGCCGT 245841 || || |||||||||| ||| | |||| ||||| ||| | || || ||||| Sbjct 17969 CGCGATACGCGCCGCCAGCTTCGAGAAGTCCGGGTGCTGCGTGCTGCAGTAGGCCGCCGT 18028 Query 245842 GTGGGCCAGCAGCTCGTCAATCTCGGACGT 245871 | ||| ||||||||| | ||| ||||| Sbjct 18029 CTCAGCCGCCAGCTCGTCCAGCTCCGACGT 18058 >seq4274 Length=4240 Score = 453 bits (502), Expect = 2e-122 Identities = 1213/1819 (67%), Gaps = 80/1819 (4%) Strand=Plus/Plus Query 244081 CAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCT 244140 ||||| | ||||||| | | ||||| |||| |||||||||||| | ||| | |||| Sbjct 8 CAGGTACTTGTTCACGATCGTGAACTCGCCCGCCAGCACGCGGCGGTTGTACATGTTGGA 67 Query 244141 GCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCAT 244200 || ||||||||| ||||| |||||||||| |||||||||||| ||| || ||||| Sbjct 68 CGTGTACGGCTCGATACTCTCGTTGTTGCCCAGGATCTGCGCCGTGGACGCCGTGGGCAT 127 Query 244201 GGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGA--TGCGGAGTCTGAGCTCG 244258 ||||| ||||| ||| ||| | | ||||| | | | | | |||| || Sbjct 128 GGGCGCCACCAACAGCGAGTTGCGAAGCCCGTGTTGCGCCACCTTGGCCTTAAGAGC-CG 186 Query 244259 TTCCAGTCCCACATGCCCGA-GAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAG 244317 ||||||||| | ||||| || | | || || ||||||||||| ||||| | Sbjct 187 C-CCAGTCCCAGAGCCCCGACGACGGCGTCACG-------CCCCACATGTCGAACTGGAA 238 Query 244318 CAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAG 244377 | ||||||||| | ||| ||| ||||| ||| |||||| || || | ||| | Sbjct 239 GATGCCCTTGCTGGCAGGGGAGCCTTCGTACGTCTCGTAGGGCCCTTCCTCTTTGGCAAT 298 Query 244378 CTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTC 244437 || | | || | ||||||||||||||| ||||||||||| ||||||| | || Sbjct 299 CTCCATGGACGTCTCCATGGCGGCGTAGTAGATAGTCTCGAAGATGTTCTTGTTGAGCTC 358 Query 244438 GCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTG 244497 || || ||| | | ||| | | |||||| |||||| |||| |||| |||||| Sbjct 359 CCGCGCGTTGTCACTCTCGAACGCATAGTCCATCAGGATGAAGGCGTCCGCCAATCCCTG 418 Query 244498 CACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGA---GCGCATGGCTTCGGGCACGGG 244554 || || ||||| | ||| | ||| ||| ||||||| |||| || || |||||||| Sbjct 419 TACACCAATGCCCACGGGGCGGTGGCGCATGTTGGACTTGCGC---GCCTCCGGCACGGG 475 Query 244555 GTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCA--TGCGGACGACGTCG 244612 ||| ||||| ||||||| |||||||| |||||||| |||| || | || ||| ||| Sbjct 476 GTAGTAGTTGACGTCGATGACCTTGTTCAGGTTGCGCGTGACCACCTTCGT--GACCTCG 533 Query 244613 GCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCG 244672 ||||| | ||| | | || | ||||| ||| |||| | Sbjct 534 TACAGCATCCTGTAGTTGAATACGCCG---TCCTC---------------CACGAACTTG 575 Query 244673 TTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACA 244732 || || || ||||||||||| ||||||||||| || | ||||||| | Sbjct 576 GGAAGTGCCACAGACGCCAGGTTGCACACGGCCACCTCGTCGGGCGCCGTGTACTCCATG 635 Query 244733 ATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCG 244792 | |||| ||| | ||| ||| | |||||||||||||| ||| || ||||||||| | Sbjct 636 ACCTCGCAGCACAAGTTGCTGGAGCGGATGGTGCCCAGGTTCTGCTGGTTGGACTTGCGG 695 Query 244793 TTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACG 244852 ||| ||||||||| | |||||||||||| | || ||||||| ||| ||| | |||| | Sbjct 696 TTGGCCGCGTCCTTGAACAGCATGAAGGGCACGCCCGTCTCGATCTGCGCGTCCAGGATG 755 Query 244853 CTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGG 244912 | ||| || | | || |||| ||| |||| || ||| || |||||| Sbjct 756 GCGAACCACAGCTGCTGCGCGTTGATGGTCTTGCGGGCGCGGCCTTCGCGCTCGTACTTC 815 Query 244913 GTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACG-CCGG 244971 |||||| |||||||||||| ||||||| | || ||| | ||| | || || Sbjct 816 TCGTACAGCGCCTCGAACTCGTCGCCCCAGCATTTGTACAGGTC-CGGCGCTTCGTTAGG 874 Query 244972 GCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCA 245031 ||| | | |||||| | |||| | | | || | || |||||| || || || | ||| Sbjct 875 GCAGAACAAACTCCATTTGCCGTTGGCTTCCACGCGCTTCATGAAAAGATCAGGCACCCA 934 Query 245032 GAGGGCCTGGAAGAGGTCCCTGGTCCTCT---GCTCGTCCGAGCCAGTGTTCTTCCTCAG 245088 | || | ||| ||||| | | | | |||||| ||| |||||| | ||| Sbjct 935 CAACGCGTAGAACAGGTCGCGCGCGCGGTGGAGCTCGT---TGCCGTGGTTCTTGCGCAG 991 Query 245089 CTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGG 245148 ||||| || || || |||||| ||||||| ||||||| ||||| |||| || ||| Sbjct 992 GTCCAAGAACTCGAACACGTCGGCGTGCCACGGCTCCAGGTAGATGGCGAAGGAGCCCTT 1051 Query 245149 CCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGG 245208 ||||| ||| ||||||||||| | | | ||||||| | ||||| | || Sbjct 1052 GCGCTTACCGCCGCCCTGGTCCACGTAGCGCGCCGTGTCGTTGAACACACGCAGCATGGG 1111 Query 245209 CACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTT 245268 | ||||| || || |||||||||||| ||||||| | || | | || ||| Sbjct 1112 GATGATGCCATTGGACGAGCCGTTGGTGCCGCGGATGTAGCTGTTGGTGGCGCGGATGTT 1171 Query 245269 GCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGT 245328 | || ||||| | ||||| || |||||||||| ||| || ||||| || Sbjct 1172 GTGCATACTGATGCCGATGCCGCCCGCCCACTTGGAGATGCAGGCACACTGCTTGAGCGT 1231 Query 245329 GTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTG 245388 ||| |||||||| ||| ||| || |||| ||||| ||||| || |||||||| Sbjct 1232 GTCGTAGATGCCCTCAATGGAGTCGTCCTGCATGGCCAGCAGGAAGCACGACGACAGCTG 1291 Query 245389 -GGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCT-C 245446 |||| || | ||| | ||||||||| ||||| ||||||| || ||| | | || | Sbjct 1292 CGGGCGCGGCG-TGCCGGCGTTGAACAGCGTGGGCGTGGCGTGCGTGAAG-AACTTCTGC 1349 Query 245447 GAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTT-GTCGCCGTGGATCTGCAGGGC 245505 || | || | |||| |||| ||| || | |||||| ||| |||||| ||| || Sbjct 1350 GACATGAGCTCGTAGGTCTCCAGCGCGGCCTTGATGTTCGTC-TTGTGGATGCCCAGCGC 1408 Query 245506 GCAC-CTCATGAGGGTGTGCTG-GGGCGTCTCGATGGGTCCCT-CGGGTC-CCTTGAGCA 245561 ||| | ||||| | ||||| || ||| |||| || | | | || | || | Sbjct 1409 -CACGCGCATGATGAGCTGCTGCGGACGT-TCGA--CCACCTTGCCGTTCACGCGGAAGA 1464 Query 245562 TGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCC 245621 |||| |||||||||||||||||| || ||||| ||| | |||||| || ||| Sbjct 1465 GGTAGCCGCGCTCGAGCGTCTTGAAGCCGAAGTAGTCGTACTCGAAGTCGCGGTCGTGGA 1524 Query 245622 TGACGGCTGCGTCGAGTCTC-TCGGCGTGCTTC-TGACTGACCTCGTAAAACTTTTGCGC 245679 ||| || | || || ||| || ||||| | | || || |||||| | | | || Sbjct 1525 TGATAGCCGAGTTCAG-CTCGTCCTTGTGCTGCATCAC-GATCTCGTACACGTCGTCGGC 1582 Query 245680 TATGAGGGGAGCC-CTGAGCCCG-----GTGTCCGGATTGACGTTGAACCAGAGCCTCTT 245733 || || || ||| | | ||||| || | |||| || |||| | | || Sbjct 1583 GATCAGCGGCGCCGCGGCGCCCGTCTTCTCGTGCACATTGCGGTGGAACAACTCGATGTT 1642 Query 245734 GCACACCTCCG-AGAACTTGGGGCTGGTGAGCTTATGCAGGTTGGTGACTGCTATGCGCG 245792 | | | | ||| ||| | ||||| ||| |||||||| | ||| || || |||| Sbjct 1643 G----TCGCTGAAGACCTT---GTTGGTGTTCTTGTGCAGGTTAGAGACCGCGATACGCG 1695 Query 245793 CCGCCAACTTGCTGTAGTCGGGGTGAGTGGTGGTCATGTTGGAGGCCGTGTGGGCCAGCA 245852 |||||| ||| | |||| ||||| ||| | || || ||||| | ||| || Sbjct 1696 CCGCCAGCTTCGAGAAGTCCGGGTGCTGTGTGCTACAGTAGGCCGCCGTCTCAGCCGCCA 1755 Query 245853 GCTCGTCAATCTCGGACGT 245871 ||||||| | ||| ||||| Sbjct 1756 GCTCGTCCAGCTCCGACGT 1774 >seq2060 Length=42285 Score = 403 bits (446), Expect = 3e-107 Identities = 610/863 (71%), Gaps = 11/863 (1%) Strand=Plus/Minus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| || | | ||| |||||| |||||||||||||| || | | ||||||||| Sbjct 32960 GATCCAGGAGCTGGAGATCTGGCAGATGTACAAGAAGGCCGAGGCCAGCTTCTGGACCGC 32901 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 ||||||| | || |||| | ||| | ||||| || | || || || Sbjct 32900 CGAGGAGCTGGATCTGGTGCACGACCTCAAGGACTGGGGCAACCTCACCGACAATGAGCG 32841 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 ||| |||| || | |||||||||||||||||| |||||||| || || ||||| Sbjct 32840 CCGCTTCATCAAGCACGTGCTGGCCTTCTTCGCCGCCAGCGACGGCATCGTGAACGAGAA 32781 Query 42464 CCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTT 42523 |||||||| | |||| | || |||||| ||||||||||||||||||||||| Sbjct 32780 CCTGGCCATGAACTTCAGCAGCGAAGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTT 32721 Query 42524 CCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTA 42580 |||||| ||||| |||||| | ||||| ||||| ||| | ||||||| ||||||| Sbjct 32720 CCAGATCGCCATCGAGAACATCCACTCGGAGGTCTACTC---GCTGCTCATCGACACGTA 32664 Query 42581 CATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCAT 42640 ||| ||| | || ||| || ||| | ||||| ||||| || || ||| | Sbjct 32663 CATTAAGGACACGGTGGAGAAGGACCATCTGCTGCGCGCCATCGAGACCATCCCGTGCGT 32604 Query 42641 CAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGA 42700 | |||||||| ||||||||||| ||| ||| | | || ||| | || Sbjct 32603 GACCAAGAAGGCCAGTTGGGCGCTCAAGTGGTGCGACTCGCGCTCGGCCTCGTATGCGGA 32544 Query 42701 GAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCAT 42760 | | || | || || | ||||| || |||||||||||||||||| ||||| |||||| Sbjct 32543 GCGTTTGCTGGCGTTCGCGGCCGTGGAAGGCATCTTCTTCTCGGGCTCCTTCTGCTCCAT 32484 Query 42761 CTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCA 42819 ||||||||| ||| || || || ||||| || |||| |||||| ||||| || |||| Sbjct 32483 CTTCTGGCTGAAGAAGCGCGGCCTC-ATGCCTGGCCTCAGCTTCTCCAACGAGCTGATCA 32425 Query 42820 GCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGC 42879 | | ||||| || |||| | ||||| ||||||||| ||| ||||| | ||| | Sbjct 32424 GTCGTGACGAAGGCATGCACTGCGACTTCGCCTGCCTCATGTACTCGA---AGCTCGTGA 32368 Query 42880 ACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGG 42939 |||||| || ||||||| || | ||||| ||| || ||||||| ||||||| | | Sbjct 32367 ACAAGCTGCCGGAGGAGCGTGTGCACGCCATTATCCGCGACGCCGTGGTGATCGAGCACG 32308 Query 42940 AGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCA 42999 ||||| | | | |||||||| ||| ||| ||||||||||| | ||||||||| Sbjct 32307 AGTTCGTGCGGGACTCGCTGCCTGTGGAGCTGATCGGCATGAACTCGGCGCTCATGTGCC 32248 Query 43000 AGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACA 43059 ||||||| ||| ||| ||||||| || |||| | | |||| | | |||||| Sbjct 32247 AGTACATTGAGTTCGTGGCCGACCGCCTGCTGTACTCGCTGGGCGTGTCCAAGATCTACA 32188 Query 43060 ACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTT 43119 || | | ||| ||||||| ||||| | |||||| || |||||||||||||||| | Sbjct 32187 ACGCCAAGAACCCGTTCGACTGGATGGACATGATCTCGCTGCAGGGCAAGACCAACTTCT 32128 Query 43120 TCGAGAAGCGCGTCGCCGACTAC 43142 ||||||||||||| | ||| ||| Sbjct 32127 TCGAGAAGCGCGTGGGCGAGTAC 32105 >seq1363 Length=31850 Score = 374 bits (414), Expect = 2e-98 Identities = 608/866 (70%), Gaps = 17/866 (2%) Strand=Plus/Plus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| || | | ||| || ||| |||||||||||||| || | | ||||||||| Sbjct 9354 GATCCAGGAGCTGGAGATTTGGCAGATGTACAAGAAGGCCGAGGCCAGCTTCTGGACCGC 9413 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 ||||||| | || |||| | ||| | | ||||| || || || ||||| Sbjct 9414 CGAGGAGCTGGATCTGGTGCACGACCTGAAGGACTGGGCCAACCTCTCGGACAACGAGCG 9473 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 ||| |||| || | |||| |||||||||||| |||||||| || || ||||| Sbjct 9474 CCACTTCATCAAGCACGTGTTGGCGTTCTTCGCCGCCAGCGACGGCATCGTGAACGAGAA 9533 Query 42464 CCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTT 42523 | |||||| | |||| | || |||||| ||||||||||||||||||||||| Sbjct 9534 CTTGGCCATGAACTTCAGCAGCGAAGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTT 9593 Query 42524 CCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTA 42580 |||||| ||||| |||||| | ||||| ||||| ||| | ||||||| ||||||| Sbjct 9594 CCAGATCGCCATCGAGAACATCCACTCGGAGGTCTACTC---GCTGCTCATCGACACGTA 9650 Query 42581 CATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCAT 42640 ||| ||| | || ||| | ||| | ||||| ||||| || || ||| | Sbjct 9651 CATTAAGGACGCGGTGGAGAAGGATCATCTGCTGCGCGCCATCGAGACCATCCCGTGCGT 9710 Query 42641 CAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGA 42700 | |||||||| ||||||||||| ||| ||| | | || ||| | || Sbjct 9711 GACCAAGAAGGCCAGTTGGGCGCTCAAGTGGTGCGACTCGCGCTCGGCCTCGTATGCTGA 9770 Query 42701 GAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCAT 42760 | | || | ||||| | ||||| || |||||||||||||| ||| |||| |||||| Sbjct 9771 GCGTTTGTTGGCCTTCGCGGCCGTGGAAGGCATCTTCTTCTCCGGCTCCTTTTGCTCCAT 9830 Query 42761 CTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCA 42819 ||||||||| ||| || || || ||||| || |||| |||||| ||||| || |||| Sbjct 9831 CTTCTGGCTGAAGAAGCGCGGCCTC-ATGCCTGGCCTCAGCTTCTCCAACGAGCTGATCA 9889 Query 42820 GCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGC 42879 | | ||||| || |||| | ||||||||||||||| ||| ||||| | ||| | Sbjct 9890 GTCGTGACGAAGGCATGCACTGCGACTTTGCCTGCCTCATGTACTCGA---AACTCGTGA 9946 Query 42880 ACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACG-GAGGCCGTGGAGATCGAGAAG 42938 |||||| || ||||||| || | ||| || ||| || |||||| ||||||| | Sbjct 9947 ACAAGCTGCCGGAGGAGCGTGTGCACAGCATTAT-ACGCGACGCCGTGTTGATCGAGCAC 10005 Query 42939 GAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGC 42998 |||||| | | | |||||||| ||| || ||||||||||| | ||||||||| Sbjct 10006 GAGTTCGTGCGGGACTCGCTGCCGGTGGAGCTCATCGGCATGAACTCGGCGCTCATGTGC 10065 Query 42999 AAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTAC 43058 ||||||| ||| ||| ||||||| || |||| | | |||| | | ||||| Sbjct 10066 CAGTACATTGAGTTCGTGGCCGACCGGCTGCTGTACTCGCTGGGCGTGTCCAAGATCTAC 10125 Query 43059 AACACGCC--GTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACT 43116 |||||| | ||| ||||||| ||||| | |||||| || ||||||||||||||| Sbjct 10126 --CACGCCAAGAACCCGTTCGACTGGATGGACATGATCTCGCTGCAGGGCAAGACCAACT 10183 Query 43117 TTTTCGAGAAGCGCGTCGCCGACTAC 43142 | |||||||||||||| | ||| ||| Sbjct 10184 TCTTCGAGAAGCGCGTGGGCGAGTAC 10209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944198717739760