Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sp._20Chile5_20[genbank_20GCA_5F001712635.1_202016- 08-24] 11,901 sequences; 84,445,542 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2060 331 9e-86 seq1363 297 2e-75 seq5117 131 2e-25 seq1233 131 2e-25 seq779 131 2e-25 seq6703 129 6e-25 seq1268 129 6e-25 seq10786 127 2e-24 seq10994 107 2e-18 seq3516 89.7 5e-13 seq42 89.7 5e-13 >seq2060 Length=42285 Score = 331 bits (366), Expect = 9e-86 Identities = 622/906 (69%), Gaps = 10/906 (1%) Strand=Plus/Plus Query 132610 TATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATA 132669 || |||||||| ||||| || || || || || |||| || || || | ||| Sbjct 32106 TACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATCATGTCCATC 32165 Query 132670 AAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTG 132729 | || || ||||| | ||||||| ||||| || ||| | ||||| | | Sbjct 32166 CAGTCGAACGGGTTCTTGGCGTTGTAGATCTTGGACACGCCCAGCGAGTACAGCAGGCGG 32225 Query 132730 TCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACC 132789 |||||||||||||| ||||| || ||||| | | || | || | ||| ||| Sbjct 32226 TCGGCCACGAACTCAATGTACTGGCACATGAGCGCCGAGTTCATGCCGATCAGCTCCACA 32285 Query 132790 GGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCT 132848 ||||||| || | ||| ||| ||||||| | || |||||| || || | Sbjct 32286 GGCAGCGAGTCCCGCACGAACTCGT-GCTCGATCACCACGGCGTCGCGGATAATGGCGTG 32344 Query 132849 AACGCGCGCCGCGCTCGGCCG-TTG--CACCAAATGCTTGAACATCAAGCAAGCAAAGTC 132905 || ||| || | |||| | ||| ||| | | | | |||| | ||| || ||||| Sbjct 32345 CACACGCTCCTC---CGGCAGCTTGTTCACGAGCTTCGAGTACATGAGGCAGGCGAAGTC 32401 Query 132906 GCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAG 132965 ||| |||| ||| ||||| | || || |||||| ||| | | ||| |||||||| Sbjct 32402 GCAGTGCATGCCTTCGTCACGACTGATCAGCTCGTTGGAGAAGCTGAGGCCAGGCATGAG 32461 Query 132966 GCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGAC 133025 |||||| || || ||||| || |||| | ||| |||||| ||||||| ||| || || Sbjct 32462 GCCGCGCTTCTTCAGCCAGAAGATGGAGCAGAAGGAGCCCGAGAAGAAGATGCCTTCCAC 32521 Query 133026 GGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAG 133085 ||||||||| |||| || ||||| | ||| ||| | || ||| || Sbjct 32522 GGCCGCGAACGCCAGCAAACGCTCCGCATACGAGGCCGAGCGCGAGTCGCACCACTTGAG 32581 Query 133086 CGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAG 133145 |||||| |||||| | | |||||||| || || ||||||||| || || | || Sbjct 32582 CGCCCAACTGGCCTTCTTGGTCACGCACGGGATGGTCTCGATGGCGCGCAGCAGATGGTC 32641 Query 133146 TTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTAC 133205 ||||| ||| | | ||| ||||||||||| ||| || | |||||||| | Sbjct 32642 CTTCTCCACCGTGTCCTTAATGTACGTGTCGATGAGCAGCGAGTAGACCTCCGAGTGGAT 32701 Query 133206 GTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTG 133265 |||||| |||||||| || |||||||| ||||| ||||||||| |||||||||||| Sbjct 32702 GTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACTTCGCT 32761 Query 133266 AGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAG 133325 ||| | | |||| || ||||| ||||||||||||||||||||||| |||||||| Sbjct 32762 GCTGAAGTTCATGGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCGGCGAAGAAGGCCAG 32821 Query 133326 CACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTT 133385 ||||||||||||||| ||||||| |||||| | | | ||||||| | | | | | Sbjct 32822 CACGTGCTTGATGAAGCGGCGCTCATTGTCGGTGAGGTTGCCCCAGTC-CTTGAGGTCGT 32880 Query 133386 GGA-CAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCC 133444 | | ||| |||| ||||||| ||||||| || |||||||| || |||||||| || Sbjct 32881 GCACCAGATCCAGCTCCTCGGCGGTCCAGAAGCTGGCCTCGGCCTTCTTGTACATCTGCC 32940 Query 133445 ACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCG 133504 | || ||| | || || || || | ||| |||||| ||||| ||| || | || Sbjct 32941 AGATCTCCAGCTCCTGGATCGGGAACAGCACGAACCGGTTCGGGTTCTCGATCAGGAACG 33000 Query 133505 GCTCCG 133510 |||||| Sbjct 33001 GCTCCG 33006 >seq1363 Length=31850 Score = 297 bits (328), Expect = 2e-75 Identities = 616/909 (68%), Gaps = 20/909 (2%) Strand=Plus/Minus Query 132610 TATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATA 132669 || |||||||| ||||| || || || || || |||| || || || | ||| Sbjct 10208 TACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATCATGTCCATC 10149 Query 132670 AAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTG 132729 | || || ||||| | || |||| ||||| || ||| | ||||||| | Sbjct 10148 CAGTCGAACGGGTTCTTGGCGTGGTAGATCTTGGACACGCCCAGCGAGTACAGCAGCCGG 10089 Query 132730 TCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACC 132789 |||||||||||||| ||||| || ||||| | | || | || | || |||| Sbjct 10088 TCGGCCACGAACTCAATGTACTGGCACATGAGCGCCGAGTTCATGCCGATGAGCTCCACC 10029 Query 132790 GGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGG---TGACGATTTC 132845 ||||||| || | ||| ||| ||||||| || |||||| | | | | | Sbjct 10028 GGCAGCGAGTCCCGCACGAACTCGT-GCTCGATCAACACGGCGTCGCGTATAATGCTGTG 9970 Query 132846 CCTAACGCGCGCCGCGCTCGGCCG-TTG--CACCAAATGCTTGAACATCAAGCAAGCAAA 132902 | || ||| || | |||| | ||| ||| | | | | |||| | ||| ||||| Sbjct 9969 C---ACACGCTCCTC---CGGCAGCTTGTTCACGAGTTTCGAGTACATGAGGCAGGCAAA 9916 Query 132903 GTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCAT 132962 |||||| |||| ||| ||||| | || || |||||| ||| | | ||| ||||| Sbjct 9915 GTCGCAGTGCATGCCTTCGTCACGACTGATCAGCTCGTTGGAGAAGCTGAGGCCAGGCAT 9856 Query 132963 GAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTC 133022 ||||||||| || || ||||| || |||| | || ||| || ||||||| ||| || Sbjct 9855 GAGGCCGCGCTTCTTCAGCCAGAAGATGGAGCAAAAGGAGCCGGAGAAGAAGATGCCTTC 9796 Query 133023 GACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCG 133082 ||||||||||| |||| || ||||| | ||| ||| | || ||| Sbjct 9795 CACGGCCGCGAAGGCCAACAAACGCTCAGCATACGAGGCCGAGCGCGAGTCGCACCACTT 9736 Query 133083 CAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACG 133142 |||||||| |||||| | | |||||||| || || ||||||||| || || | | Sbjct 9735 GAGCGCCCAACTGGCCTTCTTGGTCACGCACGGGATGGTCTCGATGGCGCGCAGCAGATG 9676 Query 133143 GAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTG 133202 ||||| ||| | | ||| ||||||||||| ||| || | |||||||| Sbjct 9675 ATCCTTCTCCACCGCGTCCTTAATGTACGTGTCGATGAGCAGCGAGTAGACCTCCGAGTG 9616 Query 133203 TACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTC 133262 | |||||| |||||||| || |||||||| ||||| ||||||||| |||||||||||| Sbjct 9615 GATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCAGCGCGCCTCGGGCACCTGCACTTC 9556 Query 133263 TTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGC 133322 ||| | | ||| || ||||| ||||||||||||||||||||||| || || Sbjct 9555 GCTGCTGAAGTTCATGGCCAAGTTCTCGTTCACGATGCCGTCGCTGGCGGCGAAGAACGC 9496 Query 133323 CAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCT---CCCAGTCGCGCGT 133379 || ||||||||||||||| |||||||||||||| | || | | ||||||| | Sbjct 9495 CAACACGTGCTTGATGAAGTGGCGCTCGTTGTC---CGAGAGGTTGGCCCAGTCCTTCAG 9439 Query 133380 GTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||| | ||| |||| ||||||| ||||||| || |||||||| || |||||||| Sbjct 9438 GTCGTGCACCAGATCCAGCTCCTCGGCGGTCCAGAAGCTGGCCTCGGCCTTCTTGTACAT 9379 Query 133440 ACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAA 133499 ||| || ||| | || || || || | ||| |||||| ||||| ||| || Sbjct 9378 CTGCCAAATCTCCAGCTCCTGGATCGGGAAGAGCACGAACCGGTTCGGGTTCTCGATCAG 9319 Query 133500 CAGCGGCTC 133508 | |||||| Sbjct 9318 AAACGGCTC 9310 >seq5117 Length=12130 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || |||||||| || ||||| | ||||| ||| | | Sbjct 12128 ATGCAGATCTTCGTGAAGACTCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCTTCG 12069 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | |||| | || | ||||||| ||||| ||||| || || ||||||| Sbjct 12068 GACTCGATCGACAACG-TGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCA 12010 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| |||||||| |||| ||||| || | ||||||||| Sbjct 12009 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAA 11950 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| | || || || ||||||| || || | |||||| Sbjct 11949 CATCCAGAAGGAGTCTACTCTCCACCTGGTGCTTCGCCTGCGCGGCGGC 11901 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || |||||||| || ||||| | ||||| ||| | | Sbjct 11900 ATGCAGATCTTCGTGAAGACTCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCTTCG 11841 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | |||| | || | ||||||| ||||| ||||| || || ||||||| Sbjct 11840 GACTCGATCGACAACG-TGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCA 11782 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| |||||||| |||| ||||| || | ||||||||| Sbjct 11781 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAA 11722 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || || || ||||||| ||| | | ||||| Sbjct 11721 CATCCAGAAGGAGTCTACTCTCCACCTGGTGCTTCGTCTTCGTGGCGG 11674 >seq1233 Length=22992 Score = 131 bits (144), Expect = 2e-25 Identities = 172/233 (74%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || ||||| ||||| || ||||| | ||||| ||| | Sbjct 559 AAGATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACGATCACGCTGGACGTGGAGCCT 500 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-G 38358 | ||| | | |||| | || | ||||||| ||||| ||||| || |||||| | Sbjct 499 TCGGACTCGATCGACAACG-TGAAGCAGAAAATCCAAGACAAGGAGGGCAT-CCCGCCTG 442 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||| || || | ||| ||||| |||||||| |||| ||||| || | ||||| Sbjct 441 ACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACT 382 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||||| ||||| | ||||| || ||||||| || | | |||||| Sbjct 381 ACAACATCCAGAAGGAGTCTACGCTTCACCTGGTGCTTCGCCTTCGCGGCGGC 329 Score = 127 bits (140), Expect = 2e-24 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || ||||| ||||| || ||||| | ||||| ||| | Sbjct 4728 AAGATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACGATCACGCTGGACGTGGAGCCG 4787 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GA 38359 | ||| | | | | || | ||||||| ||||| ||||| || |||||| || Sbjct 4788 TCGGACTCGATCGACAATGTGAAGCAGAAAATCCAAGACAAGGAGGGCAT-CCCGCCTGA 4846 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| || || | ||| ||||| |||||||| |||| ||||| || | |||||| Sbjct 4847 CCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTA 4906 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| | ||||| || ||||||| || Sbjct 4907 CAACATCCAGAAGGAGTCTACGCTTCACCTGGTGCTTCG 4945 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || ||||| || || ||||| | ||||| ||| | | Sbjct 328 ATGCAGATCTTCGTGAAGACTCTGACGGGGAAGACGATCACGCTGGACGTGGAGCCGTCG 269 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362 ||| | | | | || | ||||||| ||||| ||||| || |||||| ||||| Sbjct 268 GACTCGATCGACAATGTGAAGCAGAAAATCCAAGACAAGGAGGGCAT-CCCGCCTGACCA 210 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| |||||||| |||| ||||| || | ||||||||| Sbjct 209 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAA 150 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| | ||||| || ||||||| || | | |||||| Sbjct 149 CATCCAGAAGGAGTCTACGCTTCACCTGGTGCTTCGCCTTCGCGGCGGC 101 >seq779 Length=1215 Score = 131 bits (144), Expect = 2e-25 Identities = 172/233 (74%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || ||||| ||||| || ||||| | ||||| ||| | Sbjct 244 AAGATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACGATCACGCTGGACGTGGAGCCT 185 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-G 38358 | ||| | | |||| | || | ||||||| ||||| ||||| || |||||| | Sbjct 184 TCGGACTCGATCGACAACG-TGAAGCAGAAAATCCAAGACAAGGAGGGCAT-CCCGCCTG 127 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||| || || | ||| ||||| |||||||| |||| ||||| || | ||||| Sbjct 126 ACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACT 67 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||||| ||||| | || || || ||||||| || || | |||||| Sbjct 66 ACAACATCCAGAAGGAGTCTACTCTCCACCTGGTGCTTCGCCTGCGCGGCGGC 14 >seq6703 Length=12229 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || ||||| || || ||||| | ||||| ||| | | Sbjct 12031 ATGCAGATCTTCGTGAAGACTCTGACGGGGAAGACGATCACGCTGGACGTGGAGCCGTCG 11972 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362 ||| | | | | || | ||||||| ||||| ||||| || |||||| ||||| Sbjct 11971 GACTCGATCGACAATGTGAAGCAGAAAATCCAAGACAAGGAGGGCAT-CCCGCCTGACCA 11913 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| |||||||| |||| ||||| || | ||||||||| Sbjct 11912 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAA 11853 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | |||||||| ||||||| ||| | | ||||| Sbjct 11852 CATCCAGAAGGAGTCTACGCTGCACCTGGTGCTTCGTCTTCGTGGCGG 11805 Score = 111 bits (122), Expect = 2e-19 Identities = 113/145 (78%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAA 38386 ||||||| ||||| ||||| || |||||| ||||| ||||| || || | ||| ||||| Sbjct 12175 AAAATCCAAGACAAGGAGGGCAT-CCCGCCTGACCAGCAGCGTCTGATCTTCGCCGGCAA 12117 Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 |||||||| |||| ||||| || | ||||||||||||||| ||||| | ||||| || Sbjct 12116 GCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAACATCCAGAAGGAGTCTACGCTTCA 12057 Query 38447 TTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| || | | |||||| Sbjct 12056 CCTGGTGCTTCGCCTTCGCGGCGGC 12032 >seq1268 Length=19578 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || |||||||| || ||||| | ||||| ||| | | Sbjct 3 ATGCAGATCTTCGTGAAGACTCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCTTCG 62 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | |||| | || | ||||||| ||||| ||||| || || ||||||| Sbjct 63 GACTCGATCGACAACG-TGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGACCA 121 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| |||||||| |||| ||||| || | ||||||||| Sbjct 122 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACAA 181 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || || || ||||||| ||| | | ||||| Sbjct 182 CATCCAGAAGGAGTCTACTCTCCACCTGGTGCTTCGTCTTCGTGGCGG 229 >seq10786 Length=3597 Score = 127 bits (140), Expect = 2e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || || ||||| || ||||| | ||||| ||| | Sbjct 244 AAGATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACGATCACGCTGGACGTGGAGCCT 185 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | ||| | | |||| | || | ||||||| ||||| ||||| || || |||| Sbjct 184 TCGGACTCGATCGACAACG-TGAAGCAGAAAATCCAAGACAAGGAGGGCATCCCGCCCGA 126 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| || || | ||| ||||| |||||||| |||| ||||| || | |||||| Sbjct 125 CCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTA 66 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||| ||||| | || || || ||||||| || || | |||||| Sbjct 65 CAACATCCAGAAGGAGTCTACTCTCCACCTGGTGCTTCGCCTGCGCGGCGGC 14 >seq10994 Length=1377 Score = 107 bits (118), Expect = 2e-18 Identities = 140/191 (73%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || ||||| || |||||||| | ||||| ||| | | Sbjct 1365 ATGCAGATCTTTGTGAAGACCCTGACGGGGAAGACCATCACGCTGGACGTGGAGCCGTCG 1306 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362 |||||| | | | | || | ||||||| ||||| || || || |||||| ||||| Sbjct 1305 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCAT-CCCGCCTGACCA 1247 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| |||||||| |||| ||||| || |||||||| Sbjct 1246 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACGCTGTCGGACTACAA 1187 Query 38423 CATCCAAAAGG 38433 |||||| |||| Sbjct 1186 CATCCAGAAGG 1176 >seq3516 Length=19581 Score = 89.7 bits (98), Expect = 5e-13 Identities = 97/126 (77%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 38346 GGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGC 38405 |||||||| | ||||| ||||| || || | ||| ||||| |||||||| |||| ||| Sbjct 16725 GGAATTCCGCCTGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGC 16784 Query 38406 ACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAG 38464 || || |||||||||||||| ||||| ||| ||||| || ||||| ||||| || | Sbjct 16785 ACGCTGTCGGACTACAACATCCAGAAGGAGAGC-ACGCTCCACCTGGTGTTGCGTCTGCG 16843 Query 38465 AGGCGG 38470 || || Sbjct 16844 CGGTGG 16849 >seq42 Length=28877 Score = 89.7 bits (98), Expect = 5e-13 Identities = 97/126 (77%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 38346 GGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGC 38405 |||||||| | ||||| ||||| || || | ||| ||||| |||||||| |||| ||| Sbjct 26002 GGAATTCCGCCTGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGC 26061 Query 38406 ACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAG 38464 || || |||||||||||||| ||||| ||| ||||| || ||||| ||||| || | Sbjct 26062 ACGCTGTCGGACTACAACATCCAGAAGGAGAGC-ACGCTCCACCTGGTGTTGCGTCTGCG 26120 Query 38465 AGGCGG 38470 || || Sbjct 26121 CGGTGG 26126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500098393043840