Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sp._20Chile5_20[genbank_20GCA_5F001712635.1_202016- 08-24] 11,901 sequences; 84,445,542 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq848 269 5e-67 seq1363 250 5e-61 seq2060 217 3e-51 seq4274 214 3e-50 >seq848 Length=74974 Score = 269 bits (298), Expect = 5e-67 Identities = 721/1089 (66%), Gaps = 45/1089 (4%) Strand=Plus/Plus Query 221419 CAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGA- 221476 || ||| |||| |||||||||||| ||||| |||||||||| ||| | ||||||| | Sbjct 16598 CATGGCGGCGTAGTAGATGGTCTCGAAGATGTTCTTGTTGAG-CTCCCGCGCCTCGGCAC 16656 Query 221477 ----GAA-GTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGA 221531 ||| | |||| ||| ||| || ||| |||| |||||||||||||| |||| Sbjct 16657 TCTCGAACGCGAAGTCCAT---CAGGATG---AAGGCGTCCGCCAGTCCCTGTACACCGA 16710 Query 221532 TACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591 | || | ||| | ||| | | ||||||| | ||| |||||||||||||| |||||| Sbjct 16711 TGCCCACGGGGCGGTGGCGCATGTTGGACTTGCGCGCCTCTGGCACGGGATAGTAGTTGA 16770 Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651 ||||||| | ||||| ||||| | |||| || || |||||| |||||||| || Sbjct 16771 CGTCGATGACCTTGTTCAGGTTGCGCGTGACCACCTTCGTGACCTCGTACAGCTTCTTGT 16830 Query 221652 GATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGC 221711 ||||| | ||||||| |||||| || | || || || Sbjct 16831 AGTTGAATA---------CGCCGTC---------TTCCACGAACTTGGGCAGCGCCACAG 16872 Query 221712 TGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGA 221771 |||||||| |||||||||||||| || || |||| |||| ||| || | Sbjct 16873 ACGCCAGGTTGCACACGGCCACCTCATCGGGCGCCGTGTACTCCATGACCTCGCAGCACA 16932 Query 221772 GGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCT 221831 |||||| | |||||| ||||||| | || || |||||||| ||||| ||||||| Sbjct 16933 AGTTGCTCGAGCGGATGGTGCCCAGGTTCTGCTGGTTGGACTTGCGGTTGGCCGCGTCCT 16992 Query 221832 TGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTT 221891 || | ||||| |||||| |||| ||||| | ||| || |||| || | ||| || | Sbjct 16993 TGAACAGCATGAAGGGAACGCCCGTCTCGATCTGCGCGTCCAGGATGGCGAACCACAGCT 17052 Query 221892 CTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGC 221950 ||| ||| | | ||| | | | || ||| || | | | || || ||| Sbjct 17053 -GCTGCGCGTTGATGGTCTTGCGGGCGCGGCCTTCGCGCTCGTACTTCTCG---TACAGC 17108 Query 221951 ATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCT-GGCGGGACACATCAG 222009 || |||| || || | || || |||| | || | | | | ||| || | ||| Sbjct 17109 GCCTCGAACTCGTCGCCCCAGCACTTGTACAGGTCCGG-CGCTTCGTTGGGGCAAAACAG 17167 Query 222010 ACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTG 222069 |||||| | |||| ||| || | || |||||| || || || | ||||| ||| | Sbjct 17168 ACTCCACTTGCCGTTGGCTTCCACGCGCTTCATGAACAGATCAGGCACCCACAACGCGTA 17227 Query 222070 AAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTC 222129 || || || | | || || ||| ||||| ||| || | ||| |||| ||||| Sbjct 17228 GAACAGGTCGCGCGCGCGGTGGAGCTCGTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTC 17287 Query 222130 AAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCC 222189 || | ||| ||||||||||||||||| |||| ||| | | ||| |||||| ||| Sbjct 17288 GAACACGTCGGCGTGCCACGGCTCCAGGTAGATGGCGAAGGAGCCCTTGCGCTTGCCGCC 17347 Query 222190 ACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTT 222249 ||||| ||||| | | || ||||||| | || || | || | | || || Sbjct 17348 GCCCTGGTCCACGTAGCGCGCCGTGTCGTTGAACACACGCAGCATGGGGATGATGCCATT 17407 Query 222250 GGATCGA-CCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT--TACTGGCAGA 222306 ||| ||| ||||||||||| ||||| | ||| | | || | | || | Sbjct 17408 GGA-CGAGCCGTTGGTGCCGCGGATGTAGCTGTTGGTGGCGCGGATGTTGTGCATGCTG- 17465 Query 222307 CATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGAT 222366 |||||||| || ||||| || ||||| || || |||||| ||||| ||| Sbjct 17466 -ATGCCGATGCCGCCGGCCCACTTGGAGATGCACGCACACTGCTTGAGCGTGTCGTAGAT 17524 Query 222367 GCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGT 222426 |||||| || ||||| |||| | | |||||| || || ||||||| ||| | | Sbjct 17525 GCCCTCAATGGAGTCGTCCTGCATGGCCAGCAGGAAGCACGACGACAGCTGCGGCCGCGG 17584 Query 222427 GGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATC 222486 | | |||||| ||||||||||| ||||||| || ||| | | ||||| || || Sbjct 17585 CGTGCCGGCGTTGAACAGCGTGGGCGTGGCGTGCGTGAAGAACTTCTGCGACATGAGCTC 17644 Query 222487 GTACGTCTC 222495 ||| ||||| Sbjct 17645 GTAGGTCTC 17653 Score = 125 bits (138), Expect = 1e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 221061 TACGCATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCA 221120 |||||| |||| |||||| | ||| ||| ||| |||| | || || |||||||| Sbjct 16246 TACGCACCTCGGGCGTCCACACGCCCAGCTCAATGAGCTCCTTCATCAGGTACTTGTTCA 16305 Query 221121 CCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGA 221180 | | ||| || |||| ||||| | | | ||||| ||| || ||| |||| |||| Sbjct 16306 CGATCGTGAACTCGCCCGCCAGCACGCGGCGGTTGTACATGTTGGACGTGTACGGCTCGA 16365 Query 221181 TGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCA 221240 | ||||||||||||||||||||||| |||||| || |||||||| || || ||||||| Sbjct 16366 TACTCTCGTTGTTGCCCAGGATCTGCGCCGTGGACGCCGTGGGCATCGGCGCGACCAGCA 16425 Query 221241 GACTGTTGCGCAGTCCG 221257 | |||||| || ||| Sbjct 16426 GCGAGTTGCGAAGCCCG 16442 >seq1363 Length=31850 Score = 250 bits (276), Expect = 5e-61 Identities = 566/853 (66%), Gaps = 19/853 (2%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| |||||||||||||||| | | |||||||||||| ||| | ||| Sbjct 9367 GAGATTTGGCAGATGTACAAGAAGGCCGAGGCCAGCTTCTGGACCGCCGAGGAGCTGGAT 9426 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 |||| | ||| || | | |||| | || || | |||||| || || ||||| Sbjct 9427 CTGGTGCACGACCTGAAGGACTGGGCCAACCTCTCGGACAACGAGCGCCACTTCATCAAG 9486 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||||||||| ||||| || ||| || || || ||||||||||| || | || Sbjct 9487 CACGTGTTGGCGTTCTTCGCCGCCAGCGACGGCATCGTGAACGAGAACTTGGCCATGAAC 9546 Query 25654 TTCACCAGGGAAGTGCAGTACGTG---GAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 |||| ||| ||||||||| ||| ||||| || |||||||| |||||||| ||| Sbjct 9547 TTCAGCAGCGAAGTGCAG---GTGCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCGCC 9603 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGAC 25767 ||||| || | ||||| ||||| || | ||| || || |||||||||| ||| Sbjct 9604 ATCGAGAACATCCACTCGGAGGTCTA---CTCGCTGCTCATCGACACGTACATTAAGGAC 9660 Query 25768 GTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827 | | |||| |||| ||| | | ||||||||| ||| || || | | | |||| Sbjct 9661 GCGGTGGAGAAGGATCATCTGCTGCGCGCCATCGAGACCATCCCGTGCGTGACCAAGAAG 9720 Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTA 25887 || | ||||| | |||||| | || | || ||| || ||||| || | Sbjct 9721 GCCAGTTGGGCGCTCAAGTGGTGCGACTCGCGCTCGGCCTCGTATGCTGAGCGTTTGTTG 9780 Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947 ||||| || || ||||| |||||||| ||| ||| || ||| ||||||||||||| Sbjct 9781 GCCTTCGCGGCCGTGGAAGGCATCTTCTTCTCCGGCTCCTTTTGCTCCATCTTCTGGCTG 9840 Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 ||| || || |||||| || || ||| ||||||||||| ||||| | ||||| Sbjct 9841 AAGAAGCGCGGCCTCATGCCTGGCCTCAGCTTCTCCAACGAGCTGATCAGTCGTGACGAA 9900 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCT 26067 || | ||| | || ||||||||||| | ||| | | ||| | | |||| | | Sbjct 9901 GGCATGCACTGCGACTTTGCCTGCCTCATGTACTC--GAAACTCG-TGAACAAGCTGCCG 9957 Query 26068 CAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNN 26127 | ||| || |||| || || || || ||| ||||||| | ||||| Sbjct 9958 GAGGAGCGTGTGCACAGCATTATACGCGACGCCGTGTTGATCGAGCACGAGTTCGTGCGG 10017 Query 26128 NNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAG 26187 | ||||||||| |||||| |||| ||||||||| Sbjct 10018 GACTCGCTGCCGGTGGAGCTCATCGGCATGAACTCGGCGCTCATGTGCCAGTACATTGAG 10077 Query 26188 TATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCC--TA 26245 | |||||||||| ||||||| | |||||| | ||| ||||| ||||| | Sbjct 10078 TTCGTGGCCGACCGGCTGCTGTACTCGCTGGGCGTGTCCAAGATCTAC--CACGCCAAGA 10135 Query 26246 ACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGA 26305 |||||||||||| ||||| | || ||| || | || |||||||||||||| || ||| Sbjct 10136 ACCCGTTCGACTGGATGGACATGATCTCGCTGCAGGGCAAGACCAACTTCTTCGAGAAGC 10195 Query 26306 GGGTCGGCGACTA 26318 | || ||||| || Sbjct 10196 GCGTGGGCGAGTA 10208 >seq2060 Length=42285 Score = 217 bits (240), Expect = 3e-51 Identities = 560/854 (66%), Gaps = 21/854 (2%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| |||||||||||||||| | | |||||||||||| ||| | ||| Sbjct 32947 GAGATCTGGCAGATGTACAAGAAGGCCGAGGCCAGCTTCTGGACCGCCGAGGAGCTGGAT 32888 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 |||| | ||| | | | |||| | || || | | |||| | || ||||| Sbjct 32887 CTGGTGCACGACCTCAAGGACTGGGGCAACCTCACCGACAATGAGCGCCGCTTCATCAAG 32828 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 ||||| |||| ||||| || ||| || || || ||||||||||| ||| | || Sbjct 32827 CACGTGCTGGCCTTCTTCGCCGCCAGCGACGGCATCGTGAACGAGAACCTGGCCATGAAC 32768 Query 25654 TTCACCAGGGAAGTGCAGTACGTG---GAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 |||| ||| ||||||||| ||| ||||| || |||||||| |||||||| ||| Sbjct 32767 TTCAGCAGCGAAGTGCAG---GTGCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCGCC 32711 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGAC 25767 ||||| || | ||||| ||||| || | ||| || || |||||||||| ||| Sbjct 32710 ATCGAGAACATCCACTCGGAGGTCTA---CTCGCTGCTCATCGACACGTACATTAAGGAC 32654 Query 25768 GTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827 | |||| || | ||| | | ||||||||| ||| || || | | | |||| Sbjct 32653 ACGGTGGAGAAGGACCATCTGCTGCGCGCCATCGAGACCATCCCGTGCGTGACCAAGAAG 32594 Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTA 25887 || | ||||| | |||||| | || | || ||| || ||||| || | Sbjct 32593 GCCAGTTGGGCGCTCAAGTGGTGCGACTCGCGCTCGGCCTCGTATGCGGAGCGTTTGCTG 32534 Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGGCT 25946 || || || || ||||| |||||||| ||| || || || ||| ||||||||||||| Sbjct 32533 GCGTTCGCGGCCGTGGAAGGCATCTTCTTCTCGGGCTCCTTCTGC-TCCATCTTCTGGCT 32475 Query 25947 CAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGA 26006 ||| || || |||||| || || ||| ||||||||||| ||||| | ||||| Sbjct 32474 GAAGAAGCGCGGCCTCATGCCTGGCCTCAGCTTCTCCAACGAGCTGATCAGTCGTGACGA 32415 Query 26007 GGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTC 26066 || | ||| | || || |||||||| | ||| || | | || |||| | | Sbjct 32414 AGGCATGCACTGCGACTTCGCCTGCCTCATGTACTCGAAGCTCGTG---AACAAGCTGCC 32358 Query 26067 TCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNN 26126 | ||| || || || ||| || || |||| ||||||| | ||||| Sbjct 32357 GGAGGAGCGTGTGCACGCCATTATCCGCGACGCCGTGGTGATCGAGCACGAGTTCGTGCG 32298 Query 26127 NNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGA 26186 | ||||||||| |||||| |||| |||||||| Sbjct 32297 GGACTCGCTGCCTGTGGAGCTGATCGGCATGAACTCGGCGCTCATGTGCCAGTACATTGA 32238 Query 26187 GTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCC--T 26244 || |||||||||| ||||||| | |||||| | ||| |||||| ||||| Sbjct 32237 GTTCGTGGCCGACCGCCTGCTGTACTCGCTGGGCGTGTCCAAGATCTACA--ACGCCAAG 32180 Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304 ||||||||||||| ||||| | || ||| || | || |||||||||||||| || ||| Sbjct 32179 AACCCGTTCGACTGGATGGACATGATCTCGCTGCAGGGCAAGACCAACTTCTTCGAGAAG 32120 Query 26305 AGGGTCGGCGACTA 26318 | || ||||| || Sbjct 32119 CGCGTGGGCGAGTA 32106 >seq4274 Length=4240 Score = 214 bits (236), Expect = 3e-50 Identities = 739/1139 (65%), Gaps = 39/1139 (3%) Strand=Plus/Plus Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGCA 221425 || ||||||| ||||||||| || | | || ||| | ||| | || ||| Sbjct 261 CCTTCGTACGTCTCGTAGGGCCCTTCCTCTTTGGCAATCTCCATGGACGTCTCCATGGCG 320 Query 221426 GCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGAGAAGTGAA 221484 |||| |||||| ||||| ||||| |||||||||| ||| | || | | | ||| Sbjct 321 GCGTAGTAGATAGTCTCGAAGATGTTCTTGTTGAG-CTCCCGCGCGTTGTCACTCTCGAA 379 Query 221485 GGGCATACGCAGCATCTGAAAGA---CGTCGGCCAGTCCCTGTACTCCGATACCGATGGG 221541 | |||| | |||| | | || |||| |||| ||||||||| || || || | ||| Sbjct 380 CG-CATAGTC--CATCAGGATGAAGGCGTCCGCCAATCCCTGTACACCAATGCCCACGGG 436 Query 221542 CCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAG 221601 | ||| | | ||||||| | ||| || |||||||| || ||||||||||||| | Sbjct 437 GCGGTGGCGCATGTTGGACTTGCGCGCCTCCGGCACGGGGTAGTAGTTGACGTCGATGAC 496 Query 221602 ATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACAC 221661 ||||| ||||| | |||| || || |||||| |||| || || ||||| || Sbjct 497 CTTGTTCAGGTTGCGCGTGACCACCTTCGTGACCTCGTACAGCATCCTGTAGTTGAATAC 556 Query 221662 CAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTT 221721 |||||| | |||| || | || || || |||||||| Sbjct 557 ---------GCCGTCCT---------CCACGAACTTGGGAAGTGCCACAGACGCCAGGTT 598 Query 221722 ACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCA 221781 ||||||||||||||||| || |||| |||| ||| || | ||||||| | Sbjct 599 GCACACGGCCACCTCGTCGGGCGCCGTGTACTCCATGACCTCGCAGCACAAGTTGCTGGA 658 Query 221782 CTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCAT 221841 |||||| ||||||| | || || |||||||| ||||| ||||||||| | ||||| Sbjct 659 GCGGATGGTGCCCAGGTTCTGCTGGTTGGACTTGCGGTTGGCCGCGTCCTTGAACAGCAT 718 Query 221842 AAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGC 221900 ||||| |||| ||||| | ||| || |||| || | ||| || | ||| ||| Sbjct 719 GAAGGGCACGCCCGTCTCGATCTGCGCGTCCAGGATGGCGAACCACAGCT-GCTGCGCGT 777 Query 221901 TCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACT 221960 | | ||| | | | || ||| || | | | || || ||| || |||| Sbjct 778 TGATGGTCTTGCGGGCGCGGCCTTCGCGCTCGTACTTCTCG---TACAGCGCCTCGAACT 834 Query 221961 TTTCACCGTACGCCTCGTCCAGGCCTGGACACCT-GGCGGGACACATCAGACTCCAGTGC 222019 || || | | || |||| | || | | | | || || | || |||||| | Sbjct 835 CGTCGCCCCAGCATTTGTACAGGTCCGG-CGCTTCGTTAGGGCAGAACAAACTCCATTTG 893 Query 222020 TTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCT 222079 |||| ||| || | || |||||| || || || | ||||| ||| | || || || Sbjct 894 CCGTTGGCTTCCACGCGCTTCATGAAAAGATCAGGCACCCACAACGCGTAGAACAGGTCG 953 Query 222080 CTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCA 222139 | | || || ||| ||||| ||| || | ||| ||||| ||||| || | ||| Sbjct 954 CGCGCGCGGTGGAGCTCGTTGCCGTGGTTCTTGCGCAGGTCCAAGAACTCGAACACGTCG 1013 Query 222140 GCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCC 222199 ||||||||||||||||| |||| ||| | | ||| ||||| ||| ||||| ||| Sbjct 1014 GCGTGCCACGGCTCCAGGTAGATGGCGAAGGAGCCCTTGCGCTTACCGCCGCCCTGGTCC 1073 Query 222200 ACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGA-CC 222258 || | | || ||||||| | || || | || | | || ||||| ||| || Sbjct 1074 ACGTAGCGCGCCGTGTCGTTGAACACACGCAGCATGGGGATGATGCCATTGGA-CGAGCC 1132 Query 222259 GTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGAC--ATGCCGATA 222316 ||||||||| ||||| | ||| | | ||| ||| || |||||||| Sbjct 1133 GTTGGTGCCGCGGATGTAGCTGTTGGTGGCGCGGATGTT--GTGCATACTGATGCCGATG 1190 Query 222317 CCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATA 222376 || || || || ||||| ||| || |||||| ||||| ||||||||| || Sbjct 1191 CCGCCCGCCCACTTGGAGATGCAGGCACACTGCTTGAGCGTGTCGTAGATGCCCTCAATG 1250 Query 222377 GAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCG 222436 ||||| |||| | | |||||| || || ||||||| ||| | | | | |||| Sbjct 1251 GAGTCGTCCTGCATGGCCAGCAGGAAGCACGACGACAGCTGCGGGCGCGGCGTGCCGGCG 1310 Query 222437 TTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTC 222495 || ||||||||||| ||||||| || ||| | | ||||| || ||||| ||||| Sbjct 1311 TTGAACAGCGTGGGCGTGGCGTGCGTGAAGAACTTCTGCGACATGAGCTCGTAGGTCTC 1369 Score = 118 bits (130), Expect = 2e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 221100 CCTTGACCATGTGCTTGTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACA 221159 |||| | || || ||||||||| | ||| || |||| ||||| | | | ||||| Sbjct 1 CCTTCATCAGGTACTTGTTCACGATCGTGAACTCGCCCGCCAGCACGCGGCGGTTGTACA 60 Query 221160 GGTTAGAAGTGAACGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGG 221219 ||| || ||| |||| ||||| ||||||||||||||||||||||| |||||| || | Sbjct 61 TGTTGGACGTGTACGGCTCGATACTCTCGTTGTTGCCCAGGATCTGCGCCGTGGACGCCG 120 Query 221220 TGGGCATGGGTGCCACCAGCAGACTGTTGCGCAGTCCG 221257 |||||||||| ||||||| ||| |||||| || ||| Sbjct 121 TGGGCATGGGCGCCACCAACAGCGAGTTGCGAAGCCCG 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928706622725440