Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sp._20Chile5_20[genbank_20GCA_5F001712635.1_202016- 08-24] 11,901 sequences; 84,445,542 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq8868 82.4 8e-11 >seq8868 Length=43550 Score = 82.4 bits (90), Expect = 8e-11 Identities = 123/172 (72%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 22085 ATCGAGAGCGAGATCTTCATAGGACCCACATATTACCACAGACTCAAACATATGGTCAAG 22144 ||| || || | |||||||| || |||| || ||||| | ||||| || ||||||| | Sbjct 2341 ATCCAGTGCTACATCTTCATGGGCCCCATCTACTACCAGAAGCTCAAGCACATGGTCATG 2400 Query 22145 GACAAGATGCACGCCCGATCCC-ACGGCCAGGTGACGACGTTGCACCGGCAGCCGAACTG 22203 |||||||||||||| || ||| | | || | | || | | ||| ||||||| Sbjct 2401 GACAAGATGCACGCGCGTGCCCGAGGACCTCGCGCCG-TGCTCACCCGCCAGCCGACGGA 2459 Query 22204 TGGGCGTGCTCAGGGCGGCGGGCTGCGGTTCGGAGAGATGGAGAAGGACTGC 22255 ||||| | | | |||||| ||||| |||| ||||||||| ||||||| Sbjct 2460 GGGGCGATCGCGCGACGGCGGCCTGCGACTCGGCGAGATGGAGCGGGACTGC 2511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521468013572680