Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sp._20Chile5_20[genbank_20GCA_5F001712635.1_202016- 08-24] 11,901 sequences; 84,445,542 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq6148 87.8 2e-12 seq2466 87.8 2e-12 >seq6148 Length=6489 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 27015 GGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAA 27074 |||||| | || || || || ||||| || || ||||||||||| | ||||| || ||| Sbjct 191 GGCAAGACCATCACGCTCGACGTGGAGCCCTCGGACTCGATTGACAATGTCAAGCAGAAA 250 Query 27075 ATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAA 27134 || || ||||| || || || || || || || |||||| | || | ||||||||| || Sbjct 251 ATCCAGGACAAGGAGGGAATCCCCCCTGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAG 310 Query 27135 TTGGAAGA 27142 |||| || Sbjct 311 CTGGAGGA 318 >seq2466 Length=31792 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 27015 GGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAA 27074 |||||| | || || || || ||||| || || ||||||||||| | ||||| || ||| Sbjct 25495 GGCAAGACCATCACGCTCGACGTGGAGCCCTCGGACTCGATTGACAACGTCAAGCAGAAA 25554 Query 27075 ATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAA 27134 || || ||||| || || || || || || || |||||| | || | ||||||||| || Sbjct 25555 ATCCAGGACAAGGAGGGAATCCCCCCTGACCAGCAGCGTCTTATCTTCGCCGGCAAGCAG 25614 Query 27135 TTGGAAGA 27142 |||| || Sbjct 25615 CTGGAGGA 25622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434853700451520