Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20sp._20Chile5_20[genbank_20GCA_5F001712635.1_202016- 08-24] 11,901 sequences; 84,445,542 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq6703 174 3e-38 seq5117 174 3e-38 seq1233 174 3e-38 seq10786 172 1e-37 seq1268 170 4e-37 seq779 167 5e-36 seq10216 154 3e-32 seq10994 140 7e-28 seq5891 123 5e-23 seq2060 123 5e-23 seq9255 113 9e-20 seq3516 111 3e-19 seq42 111 3e-19 seq2466 98.7 2e-15 seq6148 95.1 3e-14 seq848 93.3 9e-14 seq7194 89.7 1e-12 >seq6703 Length=12229 Score = 174 bits (192), Expect = 3e-38 Identities = 177/228 (78%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || ||||| ||||| || | ||| || || |||||||||||||| Sbjct 11805 CCGCCACGAAGACGAAGCACCAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTC 11864 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| || ||||| || || || ||||| ||||||| ||| || |||||| ||| Sbjct 11865 AGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGG 11924 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||||||||| || ||| || || | ||||| | |||||| | || || Sbjct 11925 ATGCCCTCCTTGTCTTGGATTTTCTGC-TTCACATTGTCGATCGAGTCCGACGGCTCCAC 11983 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| ||||||| |||||| ||||| |||||||| Sbjct 11984 GTCCAGCGTGATCGTCTTCCCCGTCAGAGTCTTCACGAAGATCTGCAT 12031 Score = 138 bits (152), Expect = 2e-27 Identities = 151/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || |||||||| ||||| || | ||| || || |||||||||||||| Sbjct 12033 CCGCCGCGAAGGCGAAGCACCAGGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTC 12092 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| || ||||| || || || ||||| ||||||| ||| || |||||| ||| Sbjct 12093 AGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGG 12152 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||||||||| || ||| || || | ||||| | |||||| | || || Sbjct 12153 ATGCCCTCCTTGTCTTGGATTTTCTGC-TTCACATTGTCGATCGAGTCCGACGGCTCCAC 12211 Query 283052 TTCGAGAGTGATCGTCTT 283069 || || ||||||||||| Sbjct 12212 GTCCAGCGTGATCGTCTT 12229 >seq5117 Length=12130 Score = 174 bits (192), Expect = 3e-38 Identities = 177/228 (78%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || ||||||||||| ||||| || | || || || |||||||||||||| Sbjct 11902 CCGCCGCGCAGGCGAAGCACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 11961 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| || ||||| || || || ||||| ||||||| || || ||||| ||| Sbjct 11962 AGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 12021 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||||||||| || ||| || ||| | ||||| | |||||||| || || Sbjct 12022 ATGCCCTCCTTGTCTTGGATTTTCTGC-TTCACGTTGTCGATCGAGTCCGAAGGCTCCAC 12080 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| ||||||| |||||| ||||| |||||||| Sbjct 12081 GTCCAGCGTGATCGTCTTGCCCGTCAGAGTCTTCACGAAGATCTGCAT 12128 Score = 170 bits (188), Expect = 4e-37 Identities = 176/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || ||||| ||||| || | || || || |||||||||||||| Sbjct 11674 CCGCCACGAAGACGAAGCACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 11733 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| || ||||| || || || ||||| ||||||| || || ||||| ||| Sbjct 11734 AGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 11793 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||||||||| || ||| || ||| | ||||| | |||||||| || || Sbjct 11794 ATGCCCTCCTTGTCTTGGATTTTCTGC-TTCACGTTGTCGATCGAGTCCGAAGGCTCCAC 11852 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| ||||||| |||||| ||||| |||||||| Sbjct 11853 GTCCAGCGTGATCGTCTTGCCCGTCAGAGTCTTCACGAAGATCTGCAT 11900 >seq1233 Length=22992 Score = 174 bits (192), Expect = 3e-38 Identities = 177/228 (78%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || |||||||| ||||| || | ||| || || |||||||||||||| Sbjct 102 CCGCCGCGAAGGCGAAGCACCAGGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTC 161 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| || ||||| || || || ||||| ||||||| ||| || |||||| ||| Sbjct 162 AGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGG 221 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||||||||| || ||| || || | ||||| | |||||| | || || Sbjct 222 ATGCCCTCCTTGTCTTGGATTTTCTGC-TTCACATTGTCGATCGAGTCCGACGGCTCCAC 280 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| ||||||| |||||| ||||| |||||||| Sbjct 281 GTCCAGCGTGATCGTCTTCCCCGTCAGAGTCTTCACGAAGATCTGCAT 328 Score = 170 bits (188), Expect = 4e-37 Identities = 178/231 (77%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || |||||||| ||||| || | ||| || || |||||||||||||| Sbjct 330 CCGCCGCGAAGGCGAAGCACCAGGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTC 389 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| || ||||| || || || ||||| ||||||| ||| || |||||| ||| Sbjct 390 AGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGG 449 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||||||||| || ||| || ||| | ||||| | |||||||| || || Sbjct 450 ATGCCCTCCTTGTCTTGGATTTTCTGC-TTCACGTTGTCGATCGAGTCCGAAGGCTCCAC 508 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||||||||| || || | ||||| ||||| |||||||| || Sbjct 509 GTCCAGCGTGATCGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATCTT 559 Score = 168 bits (186), Expect = 1e-36 Identities = 178/232 (77%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || |||||||| ||||| || | ||| || || |||||||||||||| Sbjct 4957 CCACCGCGAAGGCGAAGCACCAGGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTC 4898 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| || ||||| || || || ||||| ||||||| ||| || |||||| ||| Sbjct 4897 AGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGG 4838 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||||||||| || ||||| || | ||||| | |||||| | || || Sbjct 4837 ATGCCCTCCTTGTCTTGGATTTTCTGCTTC-ACATTGTCGATCGAGTCCGACGGCTCCAC 4779 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 || || ||||||||||| || || | ||||| ||||| |||||||| ||| Sbjct 4778 GTCCAGCGTGATCGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATCTTC 4727 Score = 86.0 bits (94), Expect = 1e-11 Identities = 81/101 (80%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 283000 CCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGA 283058 ||||||||||||| || ||| || || | ||||| | |||||| | || || || || Sbjct 1 CCTTGTCTTGGATTTTCTGC-TTCACATTGTCGATCGAGTCCGACGGCTCCACGTCCAGC 59 Query 283059 GTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||||| ||||||| |||||| ||||| |||||||| Sbjct 60 GTGATCGTCTTCCCCGTCAGAGTCTTCACGAAGATCTGCAT 100 >seq10786 Length=3597 Score = 172 bits (190), Expect = 1e-37 Identities = 179/232 (77%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || ||||||||||| ||||| || | || || || |||||||||||||| Sbjct 15 CCGCCGCGCAGGCGAAGCACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 74 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| || ||||| || || || ||||| ||||||| || || ||||| ||| Sbjct 75 AGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 134 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||||||||| || ||| || ||| | ||||| | |||||||| || || Sbjct 135 ATGCCCTCCTTGTCTTGGATTTTCTGC-TTCACGTTGTCGATCGAGTCCGAAGGCTCCAC 193 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 || || ||||||||||| || |||| |||||| ||||| |||||||| ||| Sbjct 194 GTCCAGCGTGATCGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCATCTTC 245 >seq1268 Length=19578 Score = 170 bits (188), Expect = 4e-37 Identities = 176/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || ||||| ||||| || | || || || |||||||||||||| Sbjct 229 CCGCCACGAAGACGAAGCACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 170 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| || ||||| || || || ||||| ||||||| || || ||||| ||| Sbjct 169 AGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 110 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||||||||| || ||||| ||| | ||||| | |||||||| || || Sbjct 109 ATGCCCTCCTTGTCTTGGATTTTCTGCTTC-ACGTTGTCGATCGAGTCCGAAGGCTCCAC 51 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| ||||||| |||||| ||||| |||||||| Sbjct 50 GTCCAGCGTGATCGTCTTGCCCGTCAGAGTCTTCACGAAGATCTGCAT 3 >seq779 Length=1215 Score = 167 bits (184), Expect = 5e-36 Identities = 177/231 (77%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || ||||||||||| ||||| || | || || || |||||||||||||| Sbjct 15 CCGCCGCGCAGGCGAAGCACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 74 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 |||||||| || ||||| || || || ||||| ||||||| || || |||||| ||| Sbjct 75 AGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGCGGG 134 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||||||||| || ||| || ||| | ||||| | |||||||| || || Sbjct 135 ATGCCCTCCTTGTCTTGGATTTTCTGC-TTCACGTTGTCGATCGAGTCCGAAGGCTCCAC 193 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||||||||| || || | ||||| ||||| |||||||| || Sbjct 194 GTCCAGCGTGATCGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATCTT 244 >seq10216 Length=39351 Score = 154 bits (170), Expect = 3e-32 Identities = 416/629 (66%), Gaps = 17/629 (3%) Strand=Plus/Minus Query 316572 CTTCACGAATTCGGACAGATTTCCTTTATACTTCTTCAGCTTCAGGTTGGGTTCGTAATG 316631 || |||||| | ||||| || || || ||| |||||||||| || | ||||| || Sbjct 21083 CTCCACGAACTTCGACAGGTTGCCCTTGTACGTCTTCAGCTTGCGGGTC---TCGTAGTG 21027 Query 316632 GATGATAGAAGTACAGACAGCATCGAGGAAACCAGAATCGTGTGATACAATCACACATGA 316691 |||||| || || || | || ||||| ||||| ||||| || || || | | | Sbjct 21026 GATGATGTTCGTGCACACCGTGTCCAGGAACCCAGAGTCGTGGGACACCATGATGCTCGT 20967 Query 316692 AACGCCTTTTAGGTTGACCAGATAGTCGATCAGCCAGCTCACATTCGACACAGAAAGATG 316751 ||| ||||| ||||| |||| |||||| || ||| |||| | || Sbjct 20966 CACGTTCGGCAGGTTCACCAGGTAGTTCTCCAGCCAAGCGACGTTCTTCACATCCAAGTG 20907 Query 316752 GTTGGTCGGTTCGTCAAGTAGTAGTAGCTTCGCGTCCAACAGCATAGCGCGTGCGAGAGC 316811 ||| ||||| || ||||| || || | | || | | ||||||||| || || || | Sbjct 20906 GTTCGTCGGCTCATCAAGCAGGAGGATATCGGCCTTCTGCAGCATAGCACGAGCCAGCTC 20847 Query 316812 AAGCTTCATTTTCCACCCCCCGGAAAGAGTGTTAATCGGG--GCAGATTGGCGCTCAACA 316869 | ||||| ||||| || || ||||| ||| | ||| ||| | | |||| || Sbjct 20846 CAATTTCATCTTCCAACCACCCGAAAGGGTGCCCA-CGGCCTGCACCT-GCATCTCAGCA 20789 Query 316870 TCAAAGCCAAC--TGATTCGAGAGTAGACACGATTTTTTCACGAGACCATGTGTTTTCTT 316927 || || || || | ||| || |||| | | | ||| | || |||| Sbjct 20788 GTGAAACCGACGCTGCTGAGAGTGTCGACA--ACCTCCTGGTGAG-----GAGTGCTCTT 20736 Query 316928 TAACTTGGTCGTCATTGGCAATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGA 316987 || | || ||| | |||||||| || | ||| | | || || | | | Sbjct 20735 CAAGTCC-TCATCACAGAAGATGAAGTCCACCACGGACAGCTCGGCCTCAGACGCCTGCA 20677 Query 316988 GGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAACTGAC 317047 ||| ||||| || | |||| ||||| ||||| | |||||| || |||| ||| | Sbjct 20676 GGTTGTGCTCGACGAACACAGTCTTCAGGTCCTCCTTTGACGGGAAACCATCCAGCTGGC 20617 Query 317048 CGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCAT 317107 |||| |||| || | |||||| |||||||||||| ||| |||||||| || ||||| | Sbjct 20616 CGTTGGCAATAGCGCGCATCAGCGTCGACTTGCCACAACCGTTGGGGCCACACAGACCGT 20557 Query 317108 ACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATG 317167 | || | || |||||| || ||| | ||||||||| |||||| ||||||| || | Sbjct 20556 AACGGTGACCACGCTTCAGGCGAAGACGCGCGTTGTTCAGCAGAATCATACCACCGTACG 20497 Query 317168 CCAGAGAGAACTCACAATCACACAGGTCC 317196 | || |||||||| || | |||||||||| Sbjct 20496 CAAGCGAGAACTCGCAGTTACACAGGTCC 20468 Score = 98.7 bits (108), Expect = 2e-15 Identities = 99/127 (78%), Gaps = 4/127 (3%) Strand=Plus/Minus Query 316162 TCTTTGTCTTCACCGGAAGCATAACGCCATTGGATGTACTGATTGG--GCGTCATGTCAA 316219 || ||||| |||||||| ||||||| ||||||||||| || | | ||||| ||| Sbjct 21493 TCCTTGTCCTCACCGGACTGGAAACGCCACTGGATGTACTGGTTCGCAGTGTCAT--CAA 21436 Query 316220 GATGATCCTCGATGTGGTGGAAAGCGTGCTGTGCCACGTAAGCAAGACGCATATTTGGAT 316279 | || ||||| ||||||||||| |||||||| || ||||| || | ||||||| || | Sbjct 21435 GGTGGTCCTCAATGTGGTGGAACGCGTGCTGAGCAACGTATGCGAAACGCATAGAAGGGT 21376 Query 316280 GCTTCCA 316286 ||||||| Sbjct 21375 GCTTCCA 21369 >seq10994 Length=1377 Score = 140 bits (154), Expect = 7e-28 Identities = 146/189 (77%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | ||||||||||| ||||| || || || ||||| |||||| Sbjct 1178 TTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATC 1237 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATC 283030 | ||| || |||||| ||| || || |||||||| ||||| || ||| || || | || Sbjct 1238 AGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATTTTCTGC-TTGACATTGTC 1296 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||||| | || || || || ||||| ||||| ||||||| ||||| || || Sbjct 1297 AATGCTGTCCGACGGCTCCACGTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACAAA 1356 Query 283091 TATCTGCAT 283099 |||||||| Sbjct 1357 GATCTGCAT 1365 >seq5891 Length=34621 Score = 123 bits (136), Expect = 5e-23 Identities = 291/432 (67%), Gaps = 17/432 (4%) Strand=Plus/Plus Query 273584 AATAATATCTTTAGGGTTGTAACTCGGAACGTTCGTAGACCAACCGGTGCCAATACCGGA 273643 ||| || || | |||||||| |||||||| | |||||||| || ||||| ||| Sbjct 14130 AATGATGTCCATGGGGTTGTAGTTCGGAACGGAGCTGGACCAACCAGTTCCAATGCCGTC 14189 Query 273644 AGAACCATTCACCAGAATACTCGGGATAATTGGGACATAATATTCGGGCTCAATTTTATC 273703 | ||||| || || ||||||| || |||| || |||| ||||| || | Sbjct 14190 ACTGCCATTGACGAGTGCCATCGGGATGATGGGGATGTACCATTCAGGCTCGATCGACTG 14249 Query 273704 ACCATCGTCGTAAAGGTACTTCAACAAAGCATCATCCGTATCAACGAAAACCTTTCGCGT 273763 ||| || |||| ||||| | || || | | |||| || | | ||||| Sbjct 14250 ACCGTCTTCGTCCAGGTATTGCAGCACGTCGTTATCCAGCGGGTCGTAGA---TTCGCCG 14306 Query 273764 C-TGAG--GATTCAGTTTCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTG 273820 | |||| | | ||| || ||||||||||| | || || || |||||||| || Sbjct 14307 CGTGAGCTGCTCCAGGTTGGTGAAAATGTAACGAGCGCTGGCCGCATCCTTGCCGCCCAT 14366 Query 273821 CAGCCTCGAACCAAACTGACC-CTCG--GGCAGTAGCCAGTTTATGTTGTTGCTACCGAC 273877 ||| | || ||| ||||| || ||| | ||| || || ||||||||||| || || Sbjct 14367 CAGTCGCGTACCGAACTGGCCAATCGGCGACAGGAG---GTGGATGTTGTTGCTGCCCAC 14423 Query 273878 GTAATCCTGAGCCATATTCACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGC 273937 |||| || ||||| |||||||| || ||||| || ||||| ||||||||||| || Sbjct 14424 AAAATCTTGGGCCATGTTCACGATGGTACCCTGCAGACTCACCTCTCCGTGGTGATACGC 14483 Query 273938 GCTGTGTTCGGCGATATAACCACTGAACTGAGCAACCTTCACATCGCTCGTCAAGTTTCG 273997 |||||| | || ||||||| ||||| || ||||| | || |||| ||||| Sbjct 14484 CGAGTGTTCCGAGACATAACCAGCCAACTGCGCGACCTTGAGCTC---CGTCTGTTTTCG 14540 Query 273998 CTTG--AATGCG 274007 ||| |||||| Sbjct 14541 GTTGGAAATGCG 14552 >seq2060 Length=42285 Score = 123 bits (136), Expect = 5e-23 Identities = 556/864 (64%), Gaps = 33/864 (4%) Strand=Plus/Minus Query 229558 TCTGGGATATGTATAAGAAGGCGGTGGCAACCTTTTGGACCACGGAGGAAGTCCCCCTAA 229617 ||||| | ||||| |||||||| | ||| | ||| |||||| | ||||| | || Sbjct 32943 TCTGGCAGATGTACAAGAAGGCCGAGGCCAGCTTCTGGACCGCCGAGGAGCTGGATCTGG 32884 Query 229618 ATGCA-GACGTCGTCGACTGGCGCGAGAAACTCAACGACGATGAACGCCATTTCATCAAG 229676 |||| ||| || |||||| || || |||| |||| |||| |||| ||||||||| Sbjct 32883 -TGCACGACCTCAAGGACTGGGGC---AACCTCACCGACAATGAGCGCCGCTTCATCAAG 32828 Query 229677 CACATTCTCGGGTTTTTTGCAGGTTCCGACGGTATCGTGATGGAAAACTTGCAGACTAAC 229736 ||| | || | || || || | |||||| ||||||| || ||| || | ||| Sbjct 32827 CACGTGCTGGCCTTCTTCGCCGCCAGCGACGGCATCGTGAACGAGAACCTGGCCATGAAC 32768 Query 229737 TTCAGCGTCGAAGTAACGGTCCCAGAGGCACGGCAGTTTTACGCATACCAGACGTTCAAT 229796 |||||| |||||| ||| || ||||| || || |||| | ||||| || Sbjct 32767 TTCAGCAGCGAAGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCGCCATC 32708 Query 229797 GAATCTGTTCATTCGGAACAGTATGCCCTTCTTATTGACGCGCTCATTTCCGACGAGCGA 229856 || | || ||||| || | || || || ||| || |||| ||| | Sbjct 32707 GAGAACATCCACTCGGAGGTCTACTCGCTGCTCATCGACACGTACATTAAGGACACGGTG 32648 Query 229857 GAGCGTGCCGAACTGTTCGACGCCATCGAAAACATCCCG-GCG-GTCCATAACAAAGCGC 229914 ||| | | | ||| | ||||||||| | ||||||| ||| | || || || || Sbjct 32647 GAGAAGGACCATCTGCTGCGCGCCATCGAGACCATCCCGTGCGTGACC--AAGAAGGCCA 32590 Query 229915 GTTGGGCTCAGAAGTGG-----CTGGAACCCAGTAAATCGTTTGCAGAGCGTCTCGTCGC 229969 ||||||| | |||||| || | | | | |||| ||| |||||| | | || Sbjct 32589 GTTGGGCGCTCAAGTGGTGCGACTCGCGCTCGG--CCTCGTATGCGGAGCGTTTGCTGGC 32532 Query 229970 GTGGGTGTGCGTTGAGGGTATTCTGTTCTCCGGGAGTTTCTGCGCCATCTTTTGGCTACG 230029 || | | ||| || || || | ||||| || |||||| ||||||| ||||| Sbjct 32531 GTTCGCGGCCGTGGAAGGCATCTTCTTCTCGGGCTCCTTCTGCTCCATCTTCTGGCT--- 32475 Query 230030 CAACAAG---GGCGTCATGCCCGGGCTCGGTCTGTCGAACGAATTCATCAGCAGGGACGA 230086 || ||| ||| ||||||| || ||| | | || ||||| | ||||| | ||||| Sbjct 32474 GAAGAAGCGCGGCCTCATGCCTGGCCTCAGCTTCTCCAACGAGCTGATCAGTCGTGACGA 32415 Query 230087 AGGTCTTCACCAGCAATTTGGCGAG-GTCTTGTATTCGAAGCTAAATAACAAACTACCTT 230145 ||| | || | || | || || | || |||| |||||||| ||||| || || Sbjct 32414 AGGCATGCA-CTGCGACTTCGCCTGCCTCATGTACTCGAAGCTCGTGAACAAGCTGCCGG 32356 Query 230146 TCGAAACGGTGAAACAAATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCG 230205 || ||| | || || || | || | | || | |||||| | | | Sbjct 32355 AGGAGCGTGTGCACGCCATTATCCGCGACGCCGTGGTGATCGAGCACGAGTTCGTGCGGG 32296 Query 230206 ACGCTATTCCT-TGCCGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAA 230264 || | | ||| || | || ||||||||||| | | |||||| | || || || || Sbjct 32295 ACTCGCTGCCTGTGGAG-CTGATCGGCATGAACTCGGCGCTCATGTGCCAGTACATTGAG 32237 Query 230265 TTCGTAGCTGATCGTATTTTCGTGGCGCTAGG---GTACGAGAAAGTGTATAACTCCAAG 230321 ||||| || || || | | |||| || || | ||| | || ||| ||||| Sbjct 32236 TTCGTGGCCGACCGCCTGCTGTACTCGCTGGGCGTGTCCAAGA---TCTACAACGCCAAG 32180 Query 230322 AACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAG 230381 ||||| |||| | ||||| | || || || ||||| || || ||||||||||| ||| Sbjct 32179 AACCCGTTCGACTGGATGGACATGATCTCGCTGCAGGGCAAGACCAACTTCTTCGAGAAG 32120 Query 230382 CGTGTCAGCGATTA-TCAAAGGCC 230404 || || |||| || || |||||| Sbjct 32119 CGCGTGGGCGAGTACTCCAAGGCC 32096 >seq9255 Length=18854 Score = 113 bits (124), Expect = 9e-20 Identities = 263/394 (67%), Gaps = 2/394 (1%) Strand=Plus/Plus Query 273584 AATAATATCTTTAGGGTTGTAACTCGGAACGTTCGTAGACCAACCGGTGCCAATACCGGA 273643 ||| || || | |||||||| |||||||| | |||||||| || ||||| ||| Sbjct 15035 AATGATGTCCATGGGGTTGTAGTTCGGAACGGAGCTGGACCAACCAGTTCCAATGCCGTC 15094 Query 273644 AGAACCATTCACCAGAATACTCGGGATAATTGGGACATAATATTCGGGCTCAATTTTATC 273703 | ||||| || || ||||||| || |||| || |||| ||||| || | Sbjct 15095 ACTGCCATTGACGAGTGCCATCGGGATGATGGGGATGTACCATTCAGGCTCGATCGACTG 15154 Query 273704 ACCATCGTCGTAAAGGTACTTCAACAAAGCATCATCCGTATCAACGAAAACCTTTCGCGT 273763 ||| || |||| ||||||| || || | | |||| || | | ||||| Sbjct 15155 ACCGTCCTCGTCCAGGTACTGCAGCACGTCGTTATCCAGCGGGTCGTAGATTCGCCGCGT 15214 Query 273764 CTGAGGATTCAGTTTCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAG 273823 | | | | ||| || ||||||||||| | || || || |||||||| || || Sbjct 15215 CAGCTGCTCCAGGTTGGTGAAAATGTAACGAGCGCTGGCCGCATCCTTGCCGCCCATTAG 15274 Query 273824 CCTCGAACCAAACTGACCC-TCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAAT 273882 | || ||| ||||| || |||| | || || |||||||| || || || ||| Sbjct 15275 TCGCGTACCGAACTGGCCAATCGGCGACAAGAG-GTGGATGTTGTTACTGCCCACAAAAT 15333 Query 273883 CCTGAGCCATATTCACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGT 273942 | || ||||| |||||||| || ||||| || |||| ||||||||||| || || Sbjct 15334 CTTGGGCCATGTTCACGATGGTGCCCTGCAGACTCGCCTCTCCGTGGTGATACGCCGAGT 15393 Query 273943 GTTCGGCGATATAACCACTGAACTGAGCAACCTT 273976 | || | || ||||||| ||||| |||||||| Sbjct 15394 GCTCCGAGACATAACCAGCCAACTGCGCAACCTT 15427 >seq3516 Length=19581 Score = 111 bits (122), Expect = 3e-19 Identities = 100/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| || | ||||| || | |||||| || || |||||||||||||| | Sbjct 16850 ACCACCGCGCAGACGCAACACCAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGA 16791 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||| ||||| || || || ||||| ||||||| ||| || |||||| ||| Sbjct 16790 CAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGG 16731 Query 282992 AATACC 282997 ||| || Sbjct 16730 AATTCC 16725 >seq42 Length=28877 Score = 111 bits (122), Expect = 3e-19 Identities = 100/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| || | ||||| || | |||||| || || |||||||||||||| | Sbjct 26127 ACCACCGCGCAGACGCAACACCAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGA 26068 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||| ||||| || || || ||||| ||||||| ||| || |||||| ||| Sbjct 26067 CAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGG 26008 Query 282992 AATACC 282997 ||| || Sbjct 26007 AATTCC 26002 >seq2466 Length=31792 Score = 98.7 bits (108), Expect = 2e-15 Identities = 108/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || ||||| ||||| | ||| || |||||| || Sbjct 25634 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGGGGGG 25575 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| ||||| || ||| || ||| | || || | |||||| | || || Sbjct 25574 ATTCCCTCCTTGTCCTGGATTTTCTGC-TTGACGTTGTCAATCGAGTCCGAGGGCTCCAC 25516 Query 283052 TTCGAGAGTGATCGTCTTACC 283072 ||||| ||||| ||||| || Sbjct 25515 GTCGAGCGTGATGGTCTTGCC 25495 >seq6148 Length=6489 Score = 95.1 bits (104), Expect = 3e-14 Identities = 107/141 (76%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || ||||| ||||| | ||| || |||||| || Sbjct 330 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGG 271 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| ||||| || ||| || || | || || | |||||| | || || Sbjct 270 ATTCCCTCCTTGTCCTGGATTTTCTGC-TTGACATTGTCAATCGAGTCCGAGGGCTCCAC 212 Query 283052 TTCGAGAGTGATCGTCTTACC 283072 ||||| ||||| ||||| || Sbjct 211 GTCGAGCGTGATGGTCTTGCC 191 >seq848 Length=74974 Score = 93.3 bits (102), Expect = 9e-14 Identities = 194/289 (67%), Gaps = 0/289 (0%) Strand=Plus/Minus Query 299545 AACCTTGACAGGTCCATCGACGTCATGGCATACCCCATCAAAGAAGCGCAGACATCGAAC 299604 ||||| ||| | ||||||||||| || ||| | ||| |||| | || ||| Sbjct 16792 AACCTGAACAAGGTCATCGACGTCAACTACTATCCCGTGCCAGAGGCGCGCAAGTCCAAC 16733 Query 299605 ATGCTGCGCCGCCCCATCGGCGTGGGGGTACAAGGACTTCAGGATGTGTTCTTCAAACTG 299664 |||| | ||||||| | ||| | || ||||| ||||| ||| | ||| || || Sbjct 16732 ATGCGCCACCGCCCCGTGGGCATCGGTGTACAGGGACTGGCGGACGCCTTCATCCTGATG 16673 Query 299665 AAGCTCCCATTTGACTCTCCGGAGGCCAGGGATCTTAACCGGGAAATCTTCGAGCATATC 299724 | || | || || | | ||||| |||| || ||| | | ||||||||| ||| Sbjct 16672 GACTTCGCGTTCGAGAGTGCCGAGGCGCGGGAGCTCAACAAGAACATCTTCGAGACCATC 16613 Query 299725 TACTACGCTGCCGTTGAAGCGTCGGTAGAACTCGCGGAAATCCACGGGCCTCACCCCACC 299784 |||||||| ||| | || |||| | ||| |||| || | ||||| || || Sbjct 16612 TACTACGCCGCCATGGAGACGTCCATGGAAATCGCCAAAGATGAAGGGCCCTACGAGACG 16553 Query 299785 TTCGAAGGGTCTCCTGCAAGTAAGGGCATCCTCCAATACCACTTGTGGG 299833 | |||||| || ||||| || ||||||||| |||| | | || |||||| Sbjct 16552 TACGAAGGCTCCCCTGCCAGCAAGGGCATCTTCCAGTTCGACATGTGGG 16504 >seq7194 Length=30219 Score = 89.7 bits (98), Expect = 1e-12 Identities = 97/127 (76%), Gaps = 4/127 (3%) Strand=Plus/Minus Query 316162 TCTTTGTCTTCACCGGAAGCATAACGCCATTGGATGTACTGATTGG--GCGTCATGTCAA 316219 || ||||| ||||| || ||||||| ||||||||||| || | | ||||| ||| Sbjct 12476 TCCTTGTCCTCACCAGACTGGAAACGCCACTGGATGTACTGGTTCGCAGTGTCAT--CAA 12419 Query 316220 GATGATCCTCGATGTGGTGGAAAGCGTGCTGTGCCACGTAAGCAAGACGCATATTTGGAT 316279 | || ||||| ||||||||||| |||||||| || ||||| || | |||||| || | Sbjct 12418 GGTGGTCCTCAATGTGGTGGAACGCGTGCTGAGCGACGTACGCGAAACGCATCGAAGGGT 12359 Query 316280 GCTTCCA 316286 ||||||| Sbjct 12358 GCTTCCA 12352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046579591571254