Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20taxon_20totara_20[genbank_20GCA_5F001314375.1_202015- 10-14] 4,314 sequences; 55,580,915 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq712 488 7e-133 seq3251 414 1e-110 seq1 140 4e-28 seq608 125 9e-24 seq69 123 3e-23 seq375 93.3 5e-14 seq30 87.8 2e-12 >seq712 Length=19597 Score = 488 bits (540), Expect = 7e-133 Identities = 1069/1588 (67%), Gaps = 29/1588 (2%) Strand=Plus/Plus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 |||||||| || || ||||| || || || |||||| || || || | | ||| Sbjct 4865 TTCATCTTGGTCCTTGTACTTCTCTGCGTCGGCGACCATGCGATCGATATCGGCCTGCGA 4924 Query 6628 TAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTC 6687 | || || || || ||||| ||||| ||||| || || || | | ||| ||| | Sbjct 4925 CAGTCGGCCTTTGTCGTTCGTGATCGTGATCTTGTCCTCCTTGCCGGTCGACTTCTCTAC 4984 Query 6688 AGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGT 6747 ||| || |||||||| ||||| | || ||||| ||| | || | |||||| || Sbjct 4985 AGCCGACACGTTCAAAATGCCATTGACGTCGACATCAAACGTCACGTCAATTTGAGGCAC 5044 Query 6748 ACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGT 6807 ||| | ||| || || || || | | ||| | || || | | |||||| Sbjct 5045 ACCACGCGGCATGGGCGGGATGCCGTCCAGGTTAAACTTGCCCAGAAGATGGTTATCGTG 5104 Query 6808 CGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGC 6867 || | || | ||||| || ||| | || | || ||| | | ||| || || Sbjct 5105 CGTCATCGTGCGTTCGCCCTCAAACACCTGGATCAACACTCCGGATTGGTTGTCGGCGTA 5164 Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 ||| ||||| ||| ||||| | |||| ||| || || | ||||| | | ||| Sbjct 5165 CGTCGAGAACGACTGTGTCTTCTTCGCAGGAACCGTAGTGTTGCGTGGAATGAGCTTGGT 5224 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||| | ||||| ||| || |||||||| |||| || | || |||| || | | Sbjct 5225 CATGACTCCACCGGCAGTCTCCAGTCCAAGCGACAACGGGGCTACATCCAGTAGCAGTAA 5284 Query 6988 GTCTTG-AAC-----AGATTCGTTCCCTT--CACCCGTTAAGATGGCGGCTTGGACCGTC 7039 || || ||| |||| | || || |||| ||| || || |||||||| || Sbjct 5285 ATCCTGCAACTTGGAAGAT--GACCCGTTGCCACC---TAAAATCGCAGCTTGGACGGTG 5339 Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || ||||| || ||||| |||| || || | || || ||||| || Sbjct 5340 GCGCCATACGCCACAGCCTCGTCCGGGTTGATCGACTTGTTGGGCTCCTTGCCGTTGAAG 5399 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 | || || | || || || | ||||||||||| ||||| || || |||| || | Sbjct 5400 AAGTCTGACAGCAGCTGCTGCACCTTCGGGATTCGAGTCGAGCCGCCCACCAGCACAACC 5459 Query 7160 TCATTCACTTTCGATTTATCGATCTTT--GAGTCTCGAAGTGTTTTTTCGACAGGTTCCA 7217 || ||||| | | || | ||| || ||||| || || || |||||| |||| Sbjct 5460 TCGTTCACCT--GGTTCTTTGATAGTTTGGAGTCACGCAGGACTTGCGAGACAGGCTCCA 5517 Query 7218 TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTAT 7277 | || || || || || ||| || |||||||| || ||||||||||| | | | Sbjct 5518 TCGTCTTGCGAAAGAACTCTCCACATAGATCCTCAAACCGCGCACGGGTAATAGTCGAGT 5577 Query 7278 AGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATA 7337 ||| || ||||||||||| | || |||||| |||||| | || || | | || | Sbjct 5578 TGAAGTCCACGCCGTCGTACAGCGTATCAATCTCAATGTACGCCTGCGCTGAAGTGGACA 5637 Query 7338 ACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGG 7397 | |||||||| |||||||| |||||||| || | ||| || || |||||| | | | | Sbjct 5638 AAGTTCGCTTGGCGCGCTCGCACGCCGTACGAAGACGTCGTAGAGCACGCTGACTCGCCG 5697 Query 7398 AAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA-AGGAGTCTCGA 7455 ||||| || || || || || ||||| | |||| |||| | || | | Sbjct 5698 TCATATCCTTACGGTGCTTGCGCTTGAACTCAGCCACAAAGTACTCGACAAGACGGTTG- 5756 Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||| |||||||| |||| ||| || || ||||| ||||| || || || ||||| || Sbjct 5757 -TCGAAGTCTTCACCTCCCAGGTGCGTGTCGCCCGCCGTCGCCTTCACCTCGAAGATGCC 5815 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 |||||||| | | || ||| || || || || || || |||||||| ||||| || || Sbjct 5816 CTCTTCAATGCTCAGCAGCGACACGTCGAAAGTGCCGCCGCCCAGGTCGAAAATAAGCAC 5875 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 ||| ||| || | || ||| || |||||||| ||||||||||| || ||||| || Sbjct 5876 GTTGCGCTCGCCGCCCTT---CTTGTCCAGACCGTAGGCGATAGCCGCAGCAGTTGGCTC 5932 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || ||||| || ||||||||||||||| | | || || || || || || || Sbjct 5933 GTTGATGATACGCAGCACGTTCAGGCCAGCAATGGCACCAGCGTCCTTGGTGGCCTGACG 5992 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||||| ||||| ||||||||||| ||||| | || |||| | | || | |||||||| Sbjct 5993 CTGCGAGTCGTTGAAGTAGGCCGGCACCGTGATCACGGCGTTCTTCACCTCCTTACCGAT 6052 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 | | || || | || ||| ||| | || ||||| || || ||||| || | | Sbjct 6053 GAAGGCCTCGGCCACCTCGCGCATCTTGATCAGCACCATGGACGAGATCTCCTCGGGCTG 6112 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATG-GGTTTATCCGCAGCACCGG 7874 ||| |||| || || || | | || | | | || ||||||| | | | ||| Sbjct 6113 GAACGTCTTCGACTCGCCCTTGTACTGCACCACCA-CTTGAGGTTTATTCTCCGGACCAC 6171 Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934 || || || | | ||| | || || || || || | | | || | ||||| | Sbjct 6172 GGGCCACTTTGAAAGGCCAGTGCTTGATGTCCGACTGCACTTCTGGATCAGTGAACTTGC 6231 Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994 |||||| | |||||| ||||||| || ||||| | | ||||||||| |||||||| Sbjct 6232 GTCCGATCAAACGCTTGACATCAAACACCGTGTTGTGTGCGTTCATGGCCACTTGGTTCT 6291 Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054 | || || || || || ||||| || | ||||| ||||| |||||||| || |||| Sbjct 6292 TGGCAGCATCACCAATCAGACGCTC---GGTGTCCGTGAACGCCACGTACGACGGCGTCG 6348 Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114 | ||||| || || ||||| ||||| || || ||||||||||| |||||||| || |||| Sbjct 6349 TACGATTTCCCTGATCGTTTGCAATGATCTCCACGCGGTCGTTCTGCCAGACACCAACGC 6408 Query 8115 ACGAATACGTTGTTCCTAAATCAATACC 8142 |||| ||||| || || | || ||||| Sbjct 6409 ACGAGTACGTGGTACCCAGGTCGATACC 6436 >seq3251 Length=1791 Score = 414 bits (458), Expect = 1e-110 Identities = 851/1263 (67%), Gaps = 17/1263 (1%) Strand=Plus/Plus Query 6887 TTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTT 6946 ||||| | || | |||||| || | || || | || |||||| | ||| || || Sbjct 523 TTCTTGGTCGGCACCGTCGTGTTACGCGCGATCAGCGTGGTCATGACACCCCCGGCCGTC 582 Query 6947 TCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTC 7006 || || || || ||||| || ||||| || | || | |||||| || ||| ||| || Sbjct 583 TCCAGACCCAGCGACAGCGGCGTCACATCAAGCAGCAGCAGGTCCTG--CAGCTTC--TC 638 Query 7007 CCTTCACCCGTT-------AAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTC 7059 | | |||| | |||||| || || ||||| || ||||| || || ||||| Sbjct 639 CGACGAGTCGTTGCCGCTCAGGATGGCCGCCTGCACCGTGGCGCCGTACGCCACGGCCTC 698 Query 7060 ATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTG 7119 || ||||| |||| || || | || || ||||| || | || || | || || || Sbjct 699 GTCCGGGTTGATCGACTTGTTGGGCTCCTTGCCGTTGAAGAAGTCTGACAGCAGCTGCTG 758 Query 7120 AATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATC 7179 | || || || || || || |||||||||| || | || | ||| | || Sbjct 759 CACCTTGGGAATACGGGTGGAGCCACCGACCAGCACCACCTCGTGCACCTGGCTCTTGGA 818 Query 7180 GATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCAT 7239 | ||| | ||| || || || || || || ||||| || ||||| |||| Sbjct 819 CAGCTTCGCGTCGCGCAGCACCTTCTCCACGGGCTCCATTGTCTTGCGGAAGTAGTCGCC 878 Query 7240 ACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAA 7299 |||| ||||| ||||| || || || |||| | | ||| |||| ||| ||| | | Sbjct 879 GCACATGTCCTCGAAACGCGCGCGCGTGATGGTCGAGTTGAAGTCAATGCCATCGAACAG 938 Query 7300 CGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 ||| || || || ||| | || |||| ||| || | || ||||| || ||||| || Sbjct 939 CGAGTCGATCTCGATGTACGCCTGCGCCGACGACGACAGTGTACGCTTCGCACGCTCGCA 998 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419 || || || | ||||||||| |||||| |||| | | || || || ||||| || Sbjct 999 AGCAGTCCGCAGACGACGAAGAGCACGCTGGTTCTCCGTGATGTCCTTGCGGTGTTTGCG 1058 Query 7420 TTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 || ||||| | | |||||| | || | ||||| || |||||||||| ||| Sbjct 1059 CTTGAACTCCTGCGTGAAGTGGTCCACCAGACGGTTGTCGAAGTCCTCACCACCCAGGTG 1118 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || || || || ||||| || || || ||||| || | |||||| | | || ||| || Sbjct 1119 CGTGTCACCAGCCGTCGCCTTCACCTCGAAGATGCCCTCCTCAATGCTCAGCAGCGACAC 1178 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT 7599 ||| || ||||| || |||||||| ||||| || ||||| ||| || | || ||| Sbjct 1179 ATCGAAGGTACCGCCGCCCAGGTCGAAAATAAGCACGTTGCGCTCGCCGCCCTT---CTT 1235 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 || |||||||| || ||||| || || || || || || || ||||| || |||||| Sbjct 1236 GTCCAGACCGTAAGCAATAGCAGCGGCTGTCGGCTCGTTGATGATACGCAGCACGTTCAG 1295 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 ||||||||| | | || || || || || || || ||||| ||||| ||||||||||| Sbjct 1296 GCCAGCAATGGCACCAGCGTCCTTGGTGGCCTGACGCTGCGAGTCGTTGAAGTAGGCCGG 1355 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 ||||| | || |||| | | || | |||||||| | | || || | || ||| Sbjct 1356 CACCGTGATCACGGCGTTCTTCACCTCCTTACCGATGAAGGCCTCGGCCACCTCGCGCAT 1415 Query 7780 TTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAA 7839 ||| | || ||||| || || ||||| || | | ||| |||| || || || || Sbjct 1416 CTTGATCAGCACCATGGACGAGATCTCCTCGGGCTGGAACGTCTTCGACTCGCCCTTGAA 1475 Query 7840 ATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTT 7899 | || ||| || || || |||| || | | | ||| ||| ||| | || Sbjct 1476 CTGCACCGTGATCTGCGGCTTGTCGCCAGCGCCCGACGTCAGCTTGAACGGCCAGTGCTT 1535 Query 7900 CATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAA 7959 || || ||||| ||||||| ||||| | ||||| || ||||| || || || Sbjct 1536 GATGTCCGACTGGACGATCGGGTCCGAGAACTTGCGGCCGATGAGGCGCTTGGCGTCGAA 1595 Query 7960 AACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTC 8019 || ||||| | | ||||||||| |||||||| || || || ||||| ||||| || Sbjct 1596 CACCGTGTTGTGCGCGTTCATGGCCACCTGGTTCTTGGCGGCATCACCGATCAGACGCTC 1655 Query 8020 ATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAAT 8079 | ||||| ||||| ||||||||||| || || || || || |||||||| || || Sbjct 1656 ---GGTGTCCGTGAACGCCACGTACGATGGCGTGGTGCGGTTGCCCTGGTCGTTGGCGAT 1712 Query 8080 AATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAAT 8139 || || || |||||||| ||||| ||||| |||||||| || || || || | ||||| Sbjct 1713 GATCTCCACACGGTCGTTCTGCCACACGCCCACGCACGAGTAAGTCGTGCCGAGGTCAAT 1772 Query 8140 ACC 8142 || Sbjct 1773 GCC 1775 >seq1 Length=245618 Score = 140 bits (154), Expect = 4e-28 Identities = 453/696 (65%), Gaps = 17/696 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || || |||||||| || || || ||| || || || || | || Sbjct 44802 TCGAAGTCCTCGCCGCCCAAGTGCGTGTCTCCATTGGTGGCCAGCACCTCGAACACTCCG 44743 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || |||||| | || || ||||| || ||||| || || || || || | || ||| Sbjct 44742 CCGTCAATGGCCAGCAGCGTCACATCGAAGGTACCGCCGCCGAGATCGAAGACCAGCACG 44683 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | ||| | | ||||| || | || || || || || || ||||| || || Sbjct 44682 TTCTTCTCGCCCTGCGCCTTCTTGTCAATGCCATAGGCAATTGCAGCAGCCGTGGGCTCG 44623 Query 7637 TTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || ||||| | ||||| ||| || ||||| || | || || || || || || || Sbjct 44622 TTGATGATACGCTGGACAGT-CAGACCGGCAATGGTGCCAGCGTCCTTGGTAGCCTGACG 44564 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || | ||||| |||||||| || ||||| ||||| || || || | |||| Sbjct 44563 CTGGGCGTCGTTGAAGTAGGCAGGCACCGTCACGACGGCATCGAACACCTCGCGGCCGAT 44504 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 || || | ||| | ||||| ||||| || ||||| | ||| | |||||| | || Sbjct 44503 GTATCCCTCGGAGATCTGCTTCATCTTGGTGAGCACCATAGCTGATACCTCTTCGGGGGC 44444 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 ||||| | | || || || | || || | || | |||||| ||| | | Sbjct 44443 GAACTGGCGCTTCTCGCCCTTGACTTCCACCTGGATGAAGGGTTTG-CCGT--CCTTGTT 44387 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 ||| | | |||| | ||| | || | || ||| | ||| |||| | Sbjct 44386 GATCAGATCGTACGGCAGCAGCTTCTTGTCAGCCTGTACCGACTTGTCGTTGTACTTGCG 44327 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 ||||| |||||||| |||| || | || || | ||||| |||| | ||||| || Sbjct 44326 GCCGATGAGACGCTTGACATCGAACAGCGTCTTCTCCGGGTTGATGGTGGCCTGGTTTTT 44267 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTT---TCCGTAAACGCGACGTACGATGGGGT 8052 || |||| ||||| ||||| || | || ||| | ||||||||||| || || Sbjct 44266 GGCGCCGTCGCCGATCAGACGCTCGTCGTTCGAGTCCC---AGGCGACGTACGAGGGCGT 44210 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC---GCGGTCGTTTTGCCAGACGCC 8109 | || || || |||||||| ||||| ||||| || |||| || | ||| ||| Sbjct 44209 GATACGGTTACCCTGGTCGTTGGCAATGATTTCCACCTTCTGGTCCTTGT---AGATGCC 44153 Query 8110 GACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 |||||||| || || || |||| ||||| ||||| Sbjct 44152 CACGCACGAGTAGGTCGTGCCTAGGTCAATGCCGAT 44117 Score = 91.5 bits (100), Expect = 2e-13 Identities = 309/479 (65%), Gaps = 2/479 (0%) Strand=Plus/Minus Query 6593 GCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATC 6652 || || |||||||| || || || || | ||| | | ||||| ||| || ||| Sbjct 45666 GCCTCCTGGACCATGCGGTCGATCTCCTCCTGCGACAGACGGCCCTTCTCAGCAGTGATC 45607 Query 6653 GTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTT 6712 || ||| | |||| || |||| | |||| || ||||| || | || |||||||| Sbjct 45606 GTGATCGTCTCGGCCTTGCCCGTGCCCTTGTCCTCAGCGGACACCTGCAGGATACCATTG 45547 Query 6713 GCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCC 6772 || |||| |||||| | || | ||| || || ||| | ||| || | || | ||| Sbjct 45546 GCGTCAATCTCGAACGTCACCTCAATCTGCGGCACACCACGCGGGGCAGGCGGCAGACCA 45487 Query 6773 GTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAG 6832 || | || || | || || | || ||| ||| | | | || ||| || || || | Sbjct 45486 GTCAGCTCGAACTTGCCGAGAAGACGGTTGTCCTTGGTCATCGCACGCTCGCCCTCGAAC 45427 Query 6833 ACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTA 6892 || | || ||| ||||| || || || || || |||||| | || ||||| Sbjct 45426 ACCTGGATCAGCACAGCAGGCTGGTTGTCCTGGTAGGTCGAGAAGGTCTGCGACTTCTTG 45367 Query 6893 GATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGT 6952 | |||||| || || | || | | |||||| | ||||||| ||| || | Sbjct 45366 GTCGGAATCACAGTGTTACGGTTGATGAGCTTGGTCATGACGCCACCCACAGTCTCAATA 45307 Query 6953 CCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTC-TTGAACAGATTCGTTCCCTTC 7011 || | |||||||| ||| || | || | || ||| ||| ||| | ||| | || Sbjct 45306 CCCTGGGACAGAGGCACCACATCAATCAGAAGCACGTCCTTGGTCAGGT-CGTCCTGCTC 45248 Query 7012 ACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAA 7070 ||| | ||| || | || || | || ||||| ||||| |||||||||||||||| Sbjct 45247 ACCACCAAGGATACCGCCCTGCACGGCAGCACCGTAGGCGACGGCCTCATCGGGGTTAA 45189 >seq608 Length=23317 Score = 125 bits (138), Expect = 9e-24 Identities = 356/538 (66%), Gaps = 7/538 (1%) Strand=Plus/Minus Query 105463 TCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTA-CACGTCTGAAAGACCCTTTGC 105521 ||||| |||||||| ||| ||||||||| | || | ||| || | || || || Sbjct 2777 TCGTACTTCTCGTAGAGAGTTTCAAACTCGTCTCCCCAGCAC-TCGTAGAGGCCAGGAGC 2719 Query 105522 CTGATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATC 105581 | || ||||| ||||| ||| || |||| || ||| |||||||||||||||| ||| Sbjct 2718 TTCATTGGGACAGAACAAACTCCACTTGCCATTGGCTTCCACGCGTTTCATGAACAGATC 2659 Query 105582 TGGAATCCACATGGCTGAAAAGAGGTCTCGA-CACCTCGCCTCTTCATCACCTTGATTCA 105640 || | ||||| || | || | ||| ||| ||| || || | | || || ||| Sbjct 2658 AGGGACCCACAGAGCGTAGAACAAGTCACGAGCACGGTGCAACT-CGTTGCCGTGGTTCT 2600 Query 105641 AACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAG 105700 ||| | || | || |||| | || || ||||| || || || |||| || | | Sbjct 2599 TACGTAGGTCCAAGAACTCGAAGACGTCAGCATGCCACGGCTCCAAGTAGATAGCGAACG 2540 Query 105701 ACCCTTTACGAC-GCC-CCGCT-TGATTGACATATCTTGCGGTTGAGTTATACACTCGTA 105757 | |||||||| ||| |||| || | || || | || || |||| |||| || | Sbjct 2539 ATCCTTTACGTTTGCCTCCGCCCTGGTCCACGTACCGAGCCGTGTCGTTAAACACCCGCA 2480 Query 105758 ACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCAC 105817 |||||| || || |||| ||| | || || || || || || | ||| | || | Sbjct 2479 GCATTGGGATGATGCCATTGGACGAGCCGTTCGTGCCTCGGATGTAACTGTTAGTGGCTC 2420 Query 105818 GTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTT 105877 | | | ||| | | ||||||||||||||||| || ||| | |||||||| | Sbjct 2419 GGATGTTGTGCATACTGATGCCAATACCCCCAGCCCATTTGGAGATGCACGCACACTGCT 2360 Query 105878 TTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATG 105937 | | || ||||| || || || || || |||| | || | || ||| ||||| | Sbjct 2359 TCAGAGTGTCGTAGATGCCCTCAATGGAGTCGTCCTGCATGGCCAGCAAGAAGCACGAGG 2300 Query 105938 ACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAA 105995 ||| || || | || || ||||| ||||| || || || || ||||| |||| || Sbjct 2299 ACAGCTGAGGACGCGGAGTGCCAGCGTTGAAGAGCGTGGGAGTGGCATGCGTGAAGAA 2242 >seq69 Length=76656 Score = 123 bits (136), Expect = 3e-23 Identities = 258/382 (68%), Gaps = 2/382 (1%) Strand=Plus/Minus Query 22443 ATTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGA 22502 ||| || || || |||||| || || ||||| || || || | || | || | || Sbjct 60562 ATTCTACCAAGCGTCTACAAGCGAACTGTACGGAAAGGTGAAAGCCACACTGCAGGACGA 60503 Query 22503 AAATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGG-G 22561 || || ||||| |||| |||||||| |||||| |||| || | | | | |||| | Sbjct 60502 GAACACCCCGTTCCACCCTCGTTCACCCTATGGGATAGCAAAGCAGTTCGCCTTTTGGAG 60443 Query 22562 CGACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACC 22621 || | || || || | ||| | ||||| ||||| || || || || ||||||||| Sbjct 60442 CGTC-GTGAACCATCGCGAAGCCTACGGGATGTTCGCGGTGAACGGGATTTTGTTCAACC 60384 Query 22622 ACGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTA 22681 |||| ||| | || || || ||||| || ||||| || || | || ||| | Sbjct 60383 ACGAGAGTCCGCGGCGCGGACCAACTTTCGTCACTCGAAAGATCACGCGCGCTGTGGTGC 60324 Query 22682 ATATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATT 22741 || |||| || | | || || | | | | || ||| | ||||| || || || | Sbjct 60323 GCATTCGTGCTGGAATCGAGAAGTGCCTCTTCGTGGGCAACTTGGATGCCAAGCGCGACT 60264 Query 22742 GGGGTCATGCACGCGATTACGTGAAATGTATGTGGAAAATATTACAACAAGATAAACCGG 22801 |||| || |||||||| |||||| |||| |||||| || |||| || || | |||| Sbjct 60263 GGGGCCACGCACGCGACTACGTGGAATGCATGTGGCGGATGCTACAGCACGACACTCCGG 60204 Query 22802 AAGATTTTGTTATTGCAACAGG 22823 |||||||||| |||| || || Sbjct 60203 AAGATTTTGTGGTTGCGACTGG 60182 >seq375 Length=31256 Score = 93.3 bits (102), Expect = 5e-14 Identities = 181/265 (68%), Gaps = 8/265 (3%) Strand=Plus/Minus Query 7534 CGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTT 7593 ||| ||||| || || || ||||||||||| || | | | | | | ||||| | || Sbjct 14239 CGACACATCGAAGGTGCCGCCACCCAGGTCGAACACGGCAATGACCTTGCCGTCGGCCTT 14180 Query 7594 GTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACA 7653 || | | ||||| || | || || ||||| || || || || |||||||| Sbjct 14179 GTCCATG------CCGTATGCAAGGGCAGCGGCCGTGGGCTCGTTGATGATACGAAGCAC 14126 Query 7654 GTTCAGGCCAGCAATAGTTGCCG-CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGT 7712 || ||| || || || |||||| |||| || || || || || ||||| ||||| |||| Sbjct 14125 GTCCAGACCGGCGATC-TTGCCGGCATCCTTGGTGGCCTGACGCTGCGAGTCGTTGAAGT 14067 Query 7713 AGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATAT 7772 ||||||| ||||| ||||| || | || || ||| || || | || || | | Sbjct 14066 AGGCCGGCACCGTGACGACGGCCTGGGTCACCGGCTTGCCTAGGAAGCCGTCGGCAGTCT 14007 Query 7773 CTTTCATTTTGGTAAGAACCATCGA 7797 | ||||| ||||| || ||||| || Sbjct 14006 CCTTCATCTTGGTGAGCACCATGGA 13982 >seq30 Length=241204 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 184231 TTTACCCCTAAGCGGAAAAACACCGTAATGATCACGACCAACAACTGAAAGACCAGCAAT 184290 |||||| | || |||||||| ||||| || ||||| |||||||||| ||||||||| | Sbjct 58116 TTTACCACGGAGAGGAAAAACGCCGTACTGGTCACGCCCAACAACTGCAAGACCAGCCAC 58057 Query 184291 TGCAAGTGTTTTTGCAGAATCACCTTCGGTAATAATAAGAGTACACTTACCAGAGTGTGT 184350 || |||| || || ||||||||||| || | ||||| | ||| | || ||| | | Sbjct 58056 AGCCAGTGCCTTGGCTGAATCACCTTCAGTCAAGATAAGCGAACATTCACTTGAGCGAGG 57997 Query 184351 GGTACCGGCTTTATTGGCATCGTCGAGTTTTGG 184383 ||||| ||| ||||| || || || || Sbjct 57996 CCCGCCGGCGAGATTAGCATCCTCAAGCTTGGG 57964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635098550463760