Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20taxon_20totara_20[genbank_20GCA_5F001314375.1_202015- 10-14] 4,314 sequences; 55,580,915 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq712 412 5e-110 seq3251 408 6e-109 seq322 140 4e-28 seq837 131 2e-25 seq1 125 9e-24 seq52 113 6e-20 seq552 109 7e-19 seq1237 87.8 2e-12 seq30 86.0 8e-12 >seq712 Length=19597 Score = 412 bits (456), Expect = 5e-110 Identities = 1048/1581 (66%), Gaps = 20/1581 (1%) Strand=Plus/Minus Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364 |||||||| | || || || ||||| || |||||||| ||||| || || || || ||| Sbjct 6436 GGTATCGACCTGGGTACCACGTACTCGTGCGTTGGTGTCTGGCAGAACGACCGCGTGGAG 6377 Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424 || || | || || || ||||| ||||| || || |||||||| || || || || | Sbjct 6376 ATCATTGCAAACGATCAGGGAAATCGTACGACGCCGTCGTACGTGGCGTTCACGGACACC 6317 Query 195425 GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTC 195484 || ||||| |||| ||||| || || || || || |||||| | ||| || || Sbjct 6316 GAGCGTCTGATTGGTGATGCTGCCAAGAACCAAGTGGCCATGAACGCACACAACACGGTG 6257 Query 195485 TTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATA 195544 ||||| | |||||| | || || |||||||| | ||| |||| || || || Sbjct 6256 TTTGATGTCAAGCGTTTGATCGGACGCAAGTTCACTGATCCAGAAGTGCAGTCGGACATC 6197 Query 195545 AAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGAA 195604 ||| ||||| ||| |||| | | ||| || |||| ||| | | || || | Sbjct 6196 AAGCACTGGCCTTTCAAAGTGGCCCGTGGTCCGGAGAATAAACCTCA-AGTGGTGGTGCA 6138 Query 195605 TTTCACGGT-GAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAA 195663 | || || ||| ||| || ||||| || || ||||| |||||| |||| || Sbjct 6137 GTACAAGGGCGAGTCGAAGACGTTCCAGCCCGAGGAGATCTCGTCCATGGTGCTGATCAA 6078 Query 195664 GATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGT 195723 |||| ||| || || | ||||| ||||| ||||| | || || | || || Sbjct 6077 GATGCGCGAGGTGGCCGAGGCCTTCATCGGTAAGGAGGTGAAGAACGCCGTGATCACGGT 6018 Query 195724 ACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGG 195783 || || ||||||| || || || || ||||| || |||||||||| ||| ||||| || Sbjct 6017 GCCGGCCTACTTCAACGACTCGCAGCGTCAGGCCACCAAGGACGCTGGTGCCATTGCTGG 5958 Query 195784 TCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGA 195843 || ||| || | || ||||| || ||||| || || || || || || |||||||| Sbjct 5957 CCTGAACGTGCTGCGTATCATCAACGAGCCAACTGCTGCGGCTATCGCCTACGGTCTGGA 5898 Query 195844 CAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGA 195903 |||| |||| || || || || | || || || || || || || || || || Sbjct 5897 CAAG---AAGGGCGGCGAGCGCAACGTGCTTATTTTCGACCTGGGCGGCGGCACTTTCGA 5841 Query 195904 TGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATAC 195963 || || || || | ||||||| || || ||||| || ||||| || || || || || Sbjct 5840 CGTGTCGCTGCTGAGCATTGAAGAGGGCATCTTCGAGGTGAAGGCGACGGCGGGCGACAC 5781 Query 195964 TCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTC-CGTCATTTGTCTGATGAGTTCC 196022 || || || |||||||| ||||| |||||| || || ||||| | ||||||| Sbjct 5780 GCACCTGGGAGGTGAAGACTTCGACAACCGTCTTGTCGAGTACTTTGT-GGCTGAGTTCA 5722 Query 196023 GTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTG 196082 || ||| | || ||||| | | | || | ||||| || || ||| | || | Sbjct 5721 AGCGCAAGCACCGTAAGGATATGACGGCGAGTCAGCGTGCTCTACGACGTCTTCGTACGG 5662 Query 196083 CATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATT 196142 | || || || ||||| |||||| | || || | || || | ||||||||||| Sbjct 5661 CGTGCGAGCGCGCCAAGCGAACTTTGTCCACTTCAGCGCAGGCGTACATTGAGATTGATA 5602 Query 196143 CGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAA 196202 || ||| ||||| | |||||| | | |||||||||||||| || ||||| || || Sbjct 5601 CGCTGTACGACGGCGTGGACTTCAACTCGACTATTACCCGTGCGCGGTTTGAGGATCTAT 5542 Query 196203 ACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGA 196262 || || ||| | ||| ||||| ||||| ||||| || |||||| | || Sbjct 5541 GTGGAGAGTTCTTTCGCAAGACGATGGAGCCTGTCTCGCAAGTCCTGCGTGACTCCAAAC 5482 Query 196263 TGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGA 196322 | ||| |||| | || |||| || ||||| || || || || || |||||| Sbjct 5481 TATCAAAGAACCAGGTGAACGAGGTTGTGCTGGTGGGCGGCTCGACTCGAATCCCGAAGG 5422 Query 196323 TTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGG 196382 | || ||| |||| || ||||||||| || || ||||| |||||||||||| Sbjct 5421 TGCAGCAGCTGCTGTCAGACTTCTTCAACGGCAAGGAGCCCAACAAGTCGATCAACCCGG 5362 Query 196383 ATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGAC-AAT 196441 | || || || || ||||| || |||| || ||||| ||| | ||||| || | Sbjct 5361 ACGAGGCTGTGGCGTATGGCGCCACCGTCCAAGCTGCGATT---TTAGGTGGCAACGGGT 5305 Query 196442 AAT-----AACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTG 196496 || || | || ||| | |||||||| ||||| || || | || || || || | Sbjct 5304 CATCTTCCAAGTTGCAGGATTTACTGCTACTGGATGTAGCCCCGTTGTCGCTTGGACTGG 5245 Query 196497 AAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGA 196556 | || || ||||| || ||||| || | ||| | ||||| || |||| | |||| Sbjct 5244 AGACTGCCGGTGGAGTCATGACCAAGCTCATTCCACGCAACACTACGGTTCCTGCGAAGA 5185 Query 196557 AGGAACAAGTC-TTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATAT 196615 || || |||| || || ||||| |||| || ||| | || || || || || | | Sbjct 5184 AGACAC-AGTCGTTCTCGACGTACGCCGACAACCAATCCGGAGTGTTGATCCAGGTGTTT 5126 Query 196616 GAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG-AACTTTCGATTTGACGGG 196674 || || |||||| | | | ||||||||||| || || || ||| | ||| || Sbjct 5125 GAGGGCGAACGCACGATGACGCACGATAACCATCTTCTGGGCAAGTTTAACCTGGAC-GG 5067 Query 196675 GATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAA 196734 || || | || | ||||| || || ||| | || || ||| | |||| || Sbjct 5066 CATCCCGCCCATGCCGCGTGGTGTGCCTCAAATTGACGTGACGTTTGATGTCGACGTCAA 5007 Query 196735 TGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGAT 196794 ||| ||| | ||||| | |||| || ||| | | ||||| || ||||| ||| Sbjct 5006 TGGCATTTTGAACGTGTCGGCTGTAGAGAAGTCGACCGGCAAGGAGGACAAGATCACGAT 4947 Query 196795 TACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGA 196854 || || ||||| || || || || ||| || || || || ||||| || || || Sbjct 4946 CACGAACGACAAAGGCCGACTGTCGCAGGCCGATATCGATCGCATGGTCGCCGACGCAGA 4887 Query 196855 AAAGTACAGGGAAGAAGACGA 196875 ||||||| ||| |||| || Sbjct 4886 GAAGTACAAGGACCAAGATGA 4866 >seq3251 Length=1791 Score = 408 bits (452), Expect = 6e-109 Identities = 1033/1566 (66%), Gaps = 10/1566 (1%) Strand=Plus/Minus Query 195317 GGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAAT 195376 || || |||||||| || || || || ||||| || || ||||| ||||| ||| | || Sbjct 1763 GGCACGACTTACTCGTGCGTGGGCGTGTGGCAGAACGACCGTGTGGAGATCATCGCCAAC 1704 Query 195377 GACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTT 195436 ||||| || ||||| || || ||||||||||| || || || || | || ||||| | Sbjct 1703 GACCAGGGCAACCGCACCACGCCATCGTACGTGGCGTTCACGGACACCGAGCGTCTGATC 1644 Query 195437 GGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAG 195496 || |||||||| || || ||| || |||||| | ||| || || || ||||| ||| Sbjct 1643 GGTGATGCCGCCAAGAACCAGGTGGCCATGAACGCGCACAACACGGTGTTCGACGCCAAG 1584 Query 195497 CGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGGTCT 195556 || || || || |||||||| ||||| || ||||| || || ||| ||||| | Sbjct 1583 CGCCTCATCGGCCGCAAGTTCTCGGACCCGATCGTCCAGTCGGACATCAAGCACTGGCCG 1524 Query 195557 TATGAAGTTGTTCCCGGTG--TGGCTGATAAGCCTATGATTAATGTTGAATTTCACGGTG 195614 | | ||| || ||| |||| || ||||| ||| | || | || | || | Sbjct 1523 T-TCAAGCTGACGTCGGGCGCTGGC-GACAAGCCGCAGATCACGGTGCAGTTCAAGGGCG 1466 Query 195615 AGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGA 195674 || ||| || ||||| || || ||||| |||||| |||| |||||| ||| Sbjct 1465 AGTCGAAGACGTTCCAGCCCGAGGAGATCTCGTCCATGGTGCTGATCAAGATGCGCGAGG 1406 Query 195675 CTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACT 195734 || || | ||||| ||||| ||||| | || || | || || || || |||| Sbjct 1405 TGGCCGAGGCCTTCATCGGTAAGGAGGTGAAGAACGCCGTGATCACGGTGCCGGCCTACT 1346 Query 195735 TCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTC 195794 ||| || || || || ||||| || |||||||||| ||| ||||| || || ||| | Sbjct 1345 TCAACGACTCGCAGCGTCAGGCCACCAAGGACGCTGGTGCCATTGCTGGCCTGAACGTGC 1286 Query 195795 TTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGG 195854 | | || ||||| || || ||||| ||||| |||||||| |||||||||||| |||| Sbjct 1285 TGCGTATCATCAACGAGCCGACAGCCGCTGCTATTGCTTACGGTCTGGACAAG---AAGG 1229 Query 195855 ACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTC 195914 || || || || | || || || || || || ||||| || ||||| || || | Sbjct 1228 GCGGCGAGCGCAACGTGCTTATTTTCGACCTGGGCGGCGGTACCTTCGATGTGTCGCTGC 1169 Query 195915 TCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTG 195974 | | ||||| | || || ||||| || ||||| || |||||||| || || || |||| Sbjct 1168 TGAGCATTGAGGAGGGCATCTTCGAGGTGAAGGCGACGGCTGGTGACACGCACCTGGGTG 1109 Query 195975 GTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATA 196034 |||| || ||||| ||||| | || || | | |||||| || || | Sbjct 1108 GTGAGGACTTCGACAACCGTCTGGTGGACCACTTCACGCAGGAGTTCAAGCGCAAACACC 1049 Query 196035 AGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTG 196094 || || || | | || | | ||||||||||| || ||||||| || || |||| Sbjct 1048 GCAAGGACATCACGGAGAACCAGCGTGCTCTTCGTCGTCTGCGGACTGCTTGCGAGCGTG 989 Query 196095 CCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACG 196154 | || || || || || || |||| || | | ||||| || ||| |||| || | Sbjct 988 CGAAGCGTACACTGTCGTCGTCGGCGCAGGCGTACATCGAGATCGACTCGCTGTTCGATG 929 Query 196155 GAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGT 196214 | ||||||||| | | || || || || || ||||| || || | | || | | Sbjct 928 GCATTGACTTCAACTCGACCATCACGCGCGCGCGTTTCGAGGACATGTGCGGCGACTACT 869 Query 196215 TTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTA 196274 | | ||| ||||| || || || | || || || ||||| ||| || ||| Sbjct 868 TCCGCAAGACAATGGAGCCCGTGGAGAAGGTGCTGCGCGACGCGAAGCTGTCCAAGAGCC 809 Query 196275 AGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGC 196334 |||| | || | || || || || || || ||||||||||| ||| | || ||| ||| Sbjct 808 AGGTGCACGAGGTGGTGCTGGTCGGTGGCTCCACCCGTATTCCCAAGGTGCAGCAGCTGC 749 Query 196335 TTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTG 196394 | || ||||||||| || || ||||| ||||||||||||| || || || | Sbjct 748 TGTCAGACTTCTTCAACGGCAAGGAGCCCAACAAGTCGATCAACCCGGACGAGGCCGTGG 689 Query 196395 CTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGAC---AATAATAACGTCC 196451 | || || || | || ||||| || || || || ||| | || | | Sbjct 688 CGTACGGCGCCACGGTGCAGGCGGCCATCCTGAGCGGCAACGACTCGTCGGAGAAGCTGC 629 Query 196452 AAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTG 196511 | || || ||||| |||||||| | || | || |||||||| || || || || |||| Sbjct 628 AGGACCTGCTGCTGCTTGATGTGACGCCGCTGTCGCTGGGTCTGGAGACGGCCGGGGGTG 569 Query 196512 TTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTT 196571 | ||||| | | || | | ||||| || | ||||| |||||| || || | Sbjct 568 TCATGACCACGCTGATCGCGCGTAACACGACGGTGCCGACCAAGAAGTCGCAGACGTTCT 509 Query 196572 CAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCC 196631 | ||||| | || || || || ||||| | ||||| || | || || || || ||| Sbjct 508 CGACGTACGCGGACAACCAGCCGGGTGTGCTCATTCAGGTGTTCGAGGGCGAGCGGTCCA 449 Query 196632 GTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCA 196691 || || ||| | || || || | ||| | ||| || || || | || Sbjct 448 TGACACGTGACAACAACCTGCTGGGCAAGTTCAACTTGGACGGCATCCCGCCCATGCCTC 389 Query 196692 GAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCA 196751 | || || || ||||| | || ||||| || || || || || || || ||||| Sbjct 388 GCGGCGTGCCGCAGATCGACGTGACGTTCGACATTGATGCGAACGGCATCCTGAACGTGT 329 Query 196752 CAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGC 196811 | || | ||| ||| | | ||||| | ||||| ||| || || |||||||||| Sbjct 328 CGGCCGTGGAGAAGTCGACGGGCAAGGAGAACAAGATCACGATCACGAACGACAAGGGGC 269 Query 196812 GGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAG 196871 | || || ||| || ||||| || ||||| || || || ||||||| | || | Sbjct 268 GTCTGTCGCAGGCTGACATTGACCGCATGGTGTCTGAGGCCGAGAAGTACAAGTCGGAGG 209 Query 196872 ACGAGG 196877 |||||| Sbjct 208 ACGAGG 203 >seq322 Length=35284 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || ||||| || || || ||| |||| Sbjct 20082 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACGATCACGCTTGACGTGGAGCCGTCG 20023 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || ||||||||||||||||||||||| || || || ||| Sbjct 20022 GACTCGATCGACAACGTGAAGCAGAAGATTCAAGATAAGGAAGGCATCCCGCCTGACCAG 19963 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| || || || ||||| || ||||| || || || || || || || |||||| Sbjct 19962 CAACGCCTGATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGCACTCTGAGCGACTACAAC 19903 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || || || || || || | ||||| || || Sbjct 19902 ATCCAGAAGGAGTCGACGCTGCATCTGGTGCTGCGTCTTCGCGGCGG 19856 Score = 140 bits (154), Expect = 4e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || ||||| || || || ||| |||| Sbjct 20310 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACGATCACGCTTGACGTGGAGCCGTCG 20251 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || ||||||||||||||||||||||| || || || ||| Sbjct 20250 GACTCGATCGACAACGTGAAGCAGAAGATTCAAGATAAGGAAGGCATCCCGCCTGACCAG 20191 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| || || || ||||| || ||||| || || || || || || || |||||| Sbjct 20190 CAACGCCTGATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGCACTCTGAGCGACTACAAC 20131 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| || || ||||| || || Sbjct 20130 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCT 20099 Score = 140 bits (154), Expect = 4e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || ||||| || || || ||| |||| Sbjct 20538 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACGATCACGCTTGACGTGGAGCCGTCG 20479 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || ||||||||||||||||||||||| || || || ||| Sbjct 20478 GACTCGATCGACAACGTGAAGCAGAAGATTCAAGATAAGGAAGGCATCCCGCCTGACCAG 20419 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| || || || ||||| || ||||| || || || || || || || |||||| Sbjct 20418 CAACGCCTGATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGCACTCTGAGCGACTACAAC 20359 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| || || ||||| || || Sbjct 20358 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCT 20327 >seq837 Length=16651 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || || || || || || ||||| || || || ||| |||| Sbjct 6025 ATGCAGATCTTCGTGAAGACTCTGACCGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 6084 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || || || || ||||||||||| || ||||| ||| Sbjct 6085 GACTCGATCGACAACGTGAAGCAGAAAATCCAGGACAAGGAAGGCATCCCGCCCGACCAG 6144 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || ||| | || || || || || ||||| || || || ||||| | ||| |||||| Sbjct 6145 CAGCGATTAATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGTTGAGTGACTACAAC 6204 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || || ||||| || || | || || ||||| Sbjct 6205 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGTGG 6251 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || || || || || || ||||| || || || ||| |||| Sbjct 6253 ATGCAGATCTTCGTGAAGACTCTGACCGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 6312 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || || || || ||||||||||| || ||||| ||| Sbjct 6313 GACTCGATCGACAACGTGAAGCAGAAAATCCAGGACAAGGAAGGCATCCCGCCCGACCAG 6372 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || ||| | || || || || || ||||| || || || ||||| | ||| |||||| Sbjct 6373 CAGCGATTAATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGTTGAGTGACTACAAC 6432 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || || ||||| || || | || || ||||| Sbjct 6433 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGTGG 6479 Score = 131 bits (144), Expect = 2e-25 Identities = 174/241 (72%), Gaps = 3/241 (1%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || || || || || || ||||| || || || ||| |||| Sbjct 6481 ATGCAGATCTTCGTGAAGACTCTGACCGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 6540 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || || || || ||||||||||| || ||||| ||| Sbjct 6541 GACTCGATCGACAACGTGAAGCAGAAAATCCAGGACAAGGAAGGCATCCCGCCCGACCAG 6600 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || ||| | || || || || || ||||| || || || ||||| | ||| |||||| Sbjct 6601 CAGCGATTAATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGTTGAGTGACTACAAC 6660 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGCAACCGACGAA 172101 | || |||||||| || || ||||| || || || || | |||||| || | | ||| Sbjct 6661 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCT---GCGTCTGCGTGGTGGAAACTAAGAA 6717 Query 172102 G 172102 | Sbjct 6718 G 6718 >seq1 Length=245618 Score = 125 bits (138), Expect = 9e-24 Identities = 256/378 (68%), Gaps = 2/378 (1%) Strand=Plus/Plus Query 195611 GGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAG 195670 || |||||| || || || |||||||| | || |||||||| | | ||||||||| Sbjct 44426 GGCGAGAAGCGCCAGTTCGCCCCCGAAGAGGTATCAGCTATGGTGCTCACCAAGATGAAG 44485 Query 195671 GAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCT 195730 ||| | || | ||| || ||| ||||| || ||||| || ||||| Sbjct 44486 CAGATCTCCGAGGGATACATCGGCCGCGAGGTGTTCGATGCCGTCGTGACGGTGCCTGCC 44545 Query 195731 TACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAAC 195790 ||||||| || | || || ||||| || |||||||||| | ||||| ||||| | | Sbjct 44546 TACTTCAACGACGCCCAGCGTCAGGCTACCAAGGACGCTGGCACCATTGCCGGTCTGA-C 44604 Query 195791 TGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 |||| | || ||||| || || || || ||||||||||| ||||| | |||||||| Sbjct 44605 TGTCCAGCGTATCATCAACGAGCCCACGGCTGCTGCAATTGCCTATGGCATTGACAAGAA 44664 Query 195850 CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTC 195909 | | | || || || || || |||| |||||||| || ||||| || ||||| | Sbjct 44665 GGCGCAGGGCGAGAAGAACGTGCTGGTCTTCGATCTCGGCGGCGGTACCTTCGATGTGAC 44724 Query 195910 ACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCT 195969 || || ||||| || || | ||||| || ||| || ||| || || || | Sbjct 44725 GCTGCTGGCCATTGACGGCGGAGTGTTCGAGGTGCTGGCCACCAATGGAGACACGCACTT 44784 Query 195970 AGGTGGTGAAGATTTCGA 195987 || || || || ||||| Sbjct 44785 GGGCGGCGAGGACTTCGA 44802 Score = 120 bits (132), Expect = 4e-22 Identities = 318/480 (66%), Gaps = 8/480 (2%) Strand=Plus/Plus Query 196376 AACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTT 196435 ||||| ||||| || || || || ||||| ||||| |||| | ||| || |||| | Sbjct 45191 AACCCCGATGAGGCCGTCGCCTACGGTGCTGCCGTGCAGGGCGGTATCCTT---GGTGGT 45247 Query 196436 GACAATAATAACGT--CCAAGATCTT-CTGCTACTTGATGTTGCACCCGTATCCCTGGGT 196492 || | | || | ||||| | | || || ||||||| | || | |||| |||| Sbjct 45248 GAGCAGGACGACCTGACCAAGGACGTGCTTCTGATTGATGTGGTGCCTCTGTCCCAGGGT 45307 Query 196493 CTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACT 196552 |||| || | |||||| || ||||| || | || | | ||||| |||||||| Sbjct 45308 ATTGAGACTGTGGGTGGCGTCATGACCAAGCTCATCAACCGTAACACTGTGATTCCGACC 45367 Query 196553 AAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTA 196612 |||||| || ||| || || || || || || || | ||| | || || || Sbjct 45368 AAGAAGTCGCAGACCTTCTCGACCTACCAGGACAACCAGCCTGCTGTGCTGATCCAGGTG 45427 Query 196613 TATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGAC 196671 | || || || || | | || | ||||| |||| ||| || || | ||||| |||| Sbjct 45428 TTCGAGGGCGAGCG-TGCGATGACCAAGGACAACCGTCTTCTCGGCAAGTTCGAGCTGAC 45486 Query 196672 GGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGC 196731 || | || |||| || | ||||| || |||||| | || ||||| || ||||| Sbjct 45487 TGGTCTGCCGCCTGCCCCGCGTGGTGTGCCGCAGATTGAGGTGACGTTCGAGATTGACGC 45546 Query 196732 AAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGT 196791 ||||| || || | || | ||||||||||||| | ||||| | || | ||| Sbjct 45547 CAATGGTATCCTGCAGGTGTCCGCTGAGGACAAGGGCACGGGCAAGGCCGAGACGATCAC 45606 Query 196792 GATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 ||| || ||| ||||| || || || ||||||| || || || ||||| || || || Sbjct 45607 GATCACTGCTGAGAAGGGCCGTCTGTCGCAGGAGGAGATCGACCGCATGGTCCAGGAGGC 45666 >seq52 Length=88784 Score = 113 bits (124), Expect = 6e-20 Identities = 337/511 (66%), Gaps = 17/511 (3%) Strand=Plus/Plus Query 198450 TTCAAGGATGTTGAGGGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGTTGATTTT 198509 || |||||||| | ||| | ||| || ||| | ||| || |||| | ||||| || Sbjct 40343 TTTAAGGATGTGGCCGGTGTGGACGAGGCCAAGAAGGAGATCATGGAGTTCGTTGACTTC 40402 Query 198510 CTTAAAAACCCCGAAAAG-TACTATGGAAGTGGTGCCCGAATCCCACGTGGTGCTCTTCT 198568 ||| |||| ||| | | | || ||||||| ||||| ||||| || || Sbjct 40403 CTTCGCAACCA-GAAGCGCTTCACTGAGCTTGGTGCCAAGATCCCCAAGGGTGCGCTGCT 40461 Query 198569 CGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAG 198628 | || | || ||||| ||||| || || || || || | || |||||| | || Sbjct 40462 TGTTGGCCCGCCCGGTACGGGTAAGACGCTGCTGGCGAAGGCCACTGCTGGTGAAGCTAG 40521 Query 198629 TGTCCCCTTTCTTCAGTGCTCCGCGG-CGAGTTTCATCGAGATGTTCGTTGGTGTTGGTG 198687 || || || |||||| | | | || |||||||||||||||||| ||||| ||| Sbjct 40522 CGTGCCGTT-CTTCAGCATTTCTGGTTCGGATTTCATCGAGATGTTCGTCGGTGTGGGTC 40580 Query 198688 CTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATCATCTTCA 198747 | || || || || || || || | || |||| || ||||| || | |||| Sbjct 40581 CGTCACGTGTGCGTGACCTGTTCAAGGAGGCCCGTGCGAACGCTCCATGCATTGTGTTCA 40640 Query 198748 TTGATGAGATTGACGCTGTTG-----GTAAGAAGCGTGGTGGAACTACTACACCTGGTAA 198802 ||||||| ||||| ||||| | | | ||||| || | |||| || | || || Sbjct 40641 TTGATGAAATTGATGCTGTGGCGCGTGCACGAAGCAAGG-GCAACTTCT-CGGGCGGCAA 40698 Query 198803 TGATGAGCGTGAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGAC---AA 198859 || |||||||| | ||| ||||||| || || |||||||||||||| || | Sbjct 40699 CGACGAGCGTGAAAACACGCTTAACCAACTGCTGGTCGAGATGGATGGTTTCAACTCGAG 40758 Query 198860 TGAGACTGGTATCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGCACT 198919 ||| ||| | |||||| |||| | || || | |||||| || || | || | Sbjct 40759 TGA---AGGTGTGGTGGTGCTTGCAGGCACGAACCGTGCTGATATTCTTGACAAGGCCAT 40815 Query 198920 GCTTCGTCCCGGTCGATTCGACCGTAAGATT 198950 || ||||| |||||||||||| | ||||| Sbjct 40816 TCTGCGTCCTGGTCGATTCGACAGGCAGATT 40846 >seq552 Length=27436 Score = 109 bits (120), Expect = 7e-19 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || ||||| || ||||| || || || ||| |||| Sbjct 16413 ATGCAGATCTTTGTGAAGACCCTGACGGGAAAGACCATCACGCTGGACGTGGAGCCGTCC 16472 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 |||| || || || |||| || || || || ||||| || || || || || ||| Sbjct 16473 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAGGGAATCCCGCCTGACCAG 16532 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || ||||| | || |||||| Sbjct 16533 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGTCGGACTACAAC 16592 Query 172042 GTTCAAAAGG 172051 | || |||| Sbjct 16593 ATCCAGAAGG 16602 >seq1237 Length=19988 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/71 (90%), Gaps = 4/71 (6%) Strand=Plus/Minus Query 167232 GTGGGGTTTGAACCCACG-AGACTTG--CGTC-AGCGGGTCTTAAGTCCGCCCCCTTAGA 167287 |||||||||||||||||| ||||| |||| ||||| ||||||||||||||||||||| Sbjct 11032 GTGGGGTTTGAACCCACGCAGACTGTAACGTCTAGCGGATCTTAAGTCCGCCCCCTTAGA 10973 Query 167288 CCACTCGGGCA 167298 ||||||||||| Sbjct 10972 CCACTCGGGCA 10962 >seq30 Length=241204 Score = 86.0 bits (94), Expect = 8e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 182907 TGGGCCACAGATGCATCTCGGACATTCTTACACTTTCCCCGAAGTGGAAAGACGCCGTAA 182966 || |||||||||||||| || ||||| || || || || ||||| |||||||| Sbjct 58148 TGCGCCACAGATGCATCGCGCACATTGAGGAGTTTACCACGGAGAGGAAAAACGCCGTAC 58089 Query 182967 TGATCCCTTCCAACAACAGAGAGGCCAGCGACAGCGAGTGTCTTTGCCGAGTCACCCTCT 183026 || || | |||||||| | || ||||| ||||| |||| ||| || || ||||| || Sbjct 58088 TGGTCACGCCCAACAACTGCAAGACCAGCCACAGCCAGTGCCTTGGCTGAATCACCTTCA 58029 Query 183027 GTCACGATGAGTGTACA 183043 |||| ||| || | ||| Sbjct 58028 GTCAAGATAAGCGAACA 58012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657826924770080