Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20taxon_20totara_20[genbank_20GCA_5F001314375.1_202015- 10-14] 4,314 sequences; 55,580,915 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq84 87.8 2e-12 >seq84 Length=89610 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/160 (73%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 22088 GAGAGCG-AGATCTTCATAGGACCCACATATTACCACAGACTCAAACATATGGTCAAGGA 22146 || |||| |||||||||| |||||||| | ||||| | || || ||||||||| | || Sbjct 17309 GACAGCGCAGATCTTCATCGGACCCACGTTCTACCAGCGCCTGAAGCATATGGTCGACGA 17368 Query 22147 CAAGATGCACGCCCGATCCCACGGCCAGGTGACGACGTTGCACCGGCAGCCGAACTGTGG 22206 |||||| ||| | || || | |||| ||||| | | || || ||||| | || Sbjct 17369 CAAGATCCACTCGCGCTCGCGTGGCCCTGTGACCATGCTGACGCGCCAGCCCATGGAGGG 17428 Query 22207 GCGTGCTCAGGGCGGCGGGCTGCGGTTCGGAGAGATGGAG 22246 ||||||| | || |||||||| | |||||||||||| Sbjct 17429 TCGTGCTCGTGAGGGTGGGCTGCGTATGGGAGAGATGGAG 17468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521517475653520