Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20taxon_20totara_20[genbank_20GCA_5F001314375.1_202015- 10-14] 4,314 sequences; 55,580,915 total letters Query= NC_024788.1 Length=162816 Score E Sequences producing significant alignments: (Bits) Value seq3272 84.2 2e-11 >seq3272 Length=1777 Score = 84.2 bits (92), Expect = 2e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 57711 GATAGCGGTTGGGCGGACGCATACACTCCGACAGTAGAAGAGATTAAGGCTTACTTCTTA 57770 |||||||| |||| ||| ||||||| ||||||| ||| ||||||||||| || ||| | Sbjct 930 GATAGCGGATGGGGAGACTCATACACACCGACAGCAGACGAGATTAAGGCGTATTTCATG 871 Query 57771 GGATGGAGAATGTGTAATGGT 57791 |||||||| |||| | ||||| Sbjct 870 GGATGGAGGATGTATGATGGT 850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520855111373440