Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20taxon_20totara_20[genbank_20GCA_5F001314375.1_202015- 10-14] 4,314 sequences; 55,580,915 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq46 91.5 1e-13 >seq46 Length=92734 Score = 91.5 bits (100), Expect = 1e-13 Identities = 120/164 (73%), Gaps = 3/164 (2%) Strand=Plus/Minus Query 142570 GCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACATGATGTTCCAA 142629 ||||||||||| ||||| || | || ||||| || || ||||| |||||| | | ||| Sbjct 3922 GCGTGGAACCCCGCTGATCTCAATGAAATGGCGCTGCCGCCGTGCCACATGTTCTGCCAG 3863 Query 142630 TTCCACGTCGACTCGAAGAAGCGTCTGTCATGCCAGCTGTATCAGCGTTCGGCAGACTGG 142689 ||| |||| | || | | || |||| |||||| |||| ||||| ||||| ||| | Sbjct 3862 TTCTACGTGG--CAGACGGTGAGT-TGTCGTGCCAGATGTACCAGCGCTCGGCCGACATG 3806 Query 142690 TTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTCAC 142733 |||||||| || |||||||| || |||||||| || || Sbjct 3805 GGACTCGGCGTACCATTCAACATCGCCAGCTACGCGCTGCTAAC 3762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500472210580640