Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20taxon_20totara_20[genbank_20GCA_5F001314375.1_202015- 10-14] 4,314 sequences; 55,580,915 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq46 95.1 7e-15 >seq46 Length=92734 Score = 95.1 bits (104), Expect = 7e-15 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 1160 CGCCGGAACGTGGTATCCGCATGGAACGTCGGTGACCTCAGCGACATGGCACTTCACCCG 1219 ||||||| ||| | || || |||||| || ||| |||| || ||||| || | ||| Sbjct 3940 CGCCGGATTGTGCTGTCGGCGTGGAACCCCGCTGATCTCAATGAAATGGCGCTGCCGCCG 3881 Query 1220 TGCCACATCATGTTCCAGCTGTACGTCGTCGACGGCCGGCTCTCGCTGCAGGTCTACCAG 1279 |||||||| | | |||| | ||||| | ||||| | | ||| ||| | |||||| Sbjct 3880 TGCCACATGTTCTGCCAGTTCTACGTGGCAGACGGTGAGTTGTCGTGCCAGATGTACCAG 3821 Query 1280 CGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCG 1339 ||| || |||||| ||||| || || ||||| |||||| |||||||| || || Sbjct 3820 CGCTCGGCCGACATGGGACTCGGCGTACCATTCAACATCGCCAGCTACGCGCTGCTAACG 3761 Query 1340 CACATGTTCGCGCAGCAGGCCGGCCTG 1366 | || | |||||| ||| || ||| Sbjct 3760 CGATTGATAGCGCAGGTGGCAGGACTG 3734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296115630346914