Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20taxon_20totara_20[genbank_20GCA_5F001314925.1_202015- 10-14] 6,026 sequences; 54,902,777 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq60 131 1e-25 >seq60 Length=68751 Score = 131 bits (144), Expect = 1e-25 Identities = 135/177 (76%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 5590 GATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAA 5649 ||| ||||| || | |||||| || ||| || ||| || | | | | |||||| Sbjct 19129 GATGAGCTGTGCCACTCGGTCCCCACGCTTGACGGGGAAGTCTTCGGGCGAGTGGTTGAA 19188 Query 5650 CAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGAT 5709 ||| | |||||| ||||||||||||||||||||||| || || || ||||| |||||| Sbjct 19189 CAGGATCACGCCAACGTTGCCGCGGTAGTCGGCGTCGATGACACCGGCGCCAGTGTCGAT 19248 Query 5710 GAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCACCCATCGGG 5766 ||| | ||| | |||||||| ||||| || ||||||||| ||||||| || ||||| Sbjct 19249 GAACTTCTTCAGTGCCAGGCCAGAGCGAGGCGCCACGCGGGCGTAGCAGCCGTCGGG 19305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430022815998512