Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20taxon_20totara_20[genbank_20GCA_5F001314925.1_202015- 10-14] 6,026 sequences; 54,902,777 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq932 412 5e-110 seq4411 408 6e-109 seq290 140 4e-28 seq911 131 2e-25 seq35 125 9e-24 seq97 113 6e-20 seq2038 109 7e-19 seq698 87.8 2e-12 seq196 86.0 8e-12 >seq932 Length=15359 Score = 412 bits (456), Expect = 5e-110 Identities = 1050/1582 (66%), Gaps = 22/1582 (1%) Strand=Plus/Minus Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364 |||||||| | || || || ||||| || |||||||| ||||| || || || || ||| Sbjct 6426 GGTATCGACCTGGGTACCACGTACTCGTGCGTTGGTGTCTGGCAGAACGACCGCGTGGAG 6367 Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424 || || | || || || ||||| ||||| || || |||||||| || || || || | Sbjct 6366 ATCATTGCAAACGATCAGGGAAATCGTACGACGCCGTCGTACGTGGCGTTCACGGACACC 6307 Query 195425 GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTC 195484 || ||||| |||| ||||| || || || || || |||||| | ||| || || Sbjct 6306 GAGCGTCTGATTGGTGATGCTGCCAAGAACCAAGTGGCCATGAACGCACACAACACGGTG 6247 Query 195485 TTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATA 195544 ||||| | |||||| | || || |||||||| | ||| |||| || || || Sbjct 6246 TTTGATGTCAAGCGTTTGATCGGACGCAAGTTCACTGATCCAGAAGTGCAGTCGGACATC 6187 Query 195545 AAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGAA 195604 ||| ||||| ||| |||| | | ||| || |||| ||| | | || || | Sbjct 6186 AAGCACTGGCCTTTCAAAGTGGCCCGTGGTCCGGAGAATAAACCTCA-AGTGGTGGTGCA 6128 Query 195605 TTTCACGGT-GAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAA 195663 | || || ||| ||| || ||||| || || ||||| |||||| |||| || Sbjct 6127 GTACAAGGGCGAGTCGAAGACGTTCCAGCCCGAGGAGATCTCGTCCATGGTGCTGATCAA 6068 Query 195664 GATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGT 195723 |||| ||| || || | ||||| ||||| ||||| | || || | || || Sbjct 6067 GATGCGCGAGGTGGCCGAGGCCTTCATCGGTAAGGAGGTGAAGAACGCCGTGATCACGGT 6008 Query 195724 ACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGG 195783 || || ||||||| || || || || ||||| || |||||||||| ||| ||||| || Sbjct 6007 GCCGGCCTACTTCAACGACTCGCAGCGTCAGGCCACCAAGGACGCTGGTGCCATTGCTGG 5948 Query 195784 TCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGA 195843 || ||| || | || ||||| || ||||| || || || || || || |||||||| Sbjct 5947 CCTGAACGTGCTGCGTATCATCAACGAGCCAACTGCTGCGGCTATCGCCTACGGTCTGGA 5888 Query 195844 CAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGA 195903 |||| |||| || || || || | || || || || || || || || || || Sbjct 5887 CAAG---AAGGGCGGCGAGCGCAACGTGCTTATTTTCGACCTGGGCGGCGGCACTTTCGA 5831 Query 195904 TGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATAC 195963 || || || || | ||||||| || || ||||| || ||||| || || || || || Sbjct 5830 CGTGTCGCTGCTGAGCATTGAAGAGGGCATCTTCGAGGTGAAGGCGACGGCGGGCGACAC 5771 Query 195964 TCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTC-CGTCATTTGTCTGATGAGTTCC 196022 || || ||||||||||| ||||| |||||| || || ||||| | ||||||| Sbjct 5770 GCACCTGGGTGGTGAAGACTTCGACAACCGTCTTGTCGAGTACTTTGT-GGCTGAGTTCA 5712 Query 196023 GTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTG 196082 || ||| | || ||||| | | | || | ||||| || || ||| | || | Sbjct 5711 AGCGCAAGCACCGTAAGGATATGACGGCGAGTCAGCGTGCTCTACGACGTCTTCGTACGG 5652 Query 196083 CATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATT 196142 | || || || ||||| |||||| | || || | || || | ||||||||||| Sbjct 5651 CGTGCGAGCGCGCCAAGCGAACTTTGTCCACTTCAGCGCAGGCGTACATTGAGATTGATA 5592 Query 196143 CGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAA 196202 || ||| ||||| | |||||| | | |||||||||||||| || ||||| || || Sbjct 5591 CGCTGTACGACGGCGTGGACTTCAACTCGACTATTACCCGTGCGCGGTTTGAGGATCTAT 5532 Query 196203 ACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGA 196262 || || ||| | ||| ||||| ||||| ||||| || |||||| | || Sbjct 5531 GTGGAGAGTTCTTTCGCAAGACGATGGAGCCTGTCTCGCAAGTCCTGCGTGACTCCAAAC 5472 Query 196263 TGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGA 196322 | ||| |||| | || |||| || ||||| || || || || || |||||| Sbjct 5471 TATCAAAGAACCAGGTGAACGAGGTTGTGCTGGTGGGCGGCTCGACTCGAATCCCGAAGG 5412 Query 196323 TTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCG 196381 | || ||| || || ||| ||||||||| ||| || | ||| ||||||||||| Sbjct 5411 TGCAGCAGTTG-TTGATAGACTTCTTCAACGGTAAGGAACTGTTCAAGTCGATCAACCCG 5353 Query 196382 GATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGAC-AA 196440 || || || || || ||||| || |||| || ||||| ||| | ||||| || Sbjct 5352 GACGAGGCTGTGGCGTATGGCGCCACCGTCCAAGCTGCGATT---TTAGGTGGCAACGGG 5296 Query 196441 TAAT-----AACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTT 196495 | || || | || ||| | |||||||| ||||| || || | || || || || Sbjct 5295 TCATCTTCCAAGTTGCAGGATTTACTGCTACTGGATGTAGCCCCGTTGTCGCTTGGACTG 5236 Query 196496 GAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAG 196555 || || || ||||| || ||||| || | ||| | ||||| || |||| | ||| Sbjct 5235 GAGACTGCCGGTGGAGTCATGACCAAGCTCATTCCACGCAACACTACGGTTCCTGCGAAG 5176 Query 196556 AAGGAACAAGTC-TTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATA 196614 ||| || |||| || || ||||| |||| || ||| | || || || || || | Sbjct 5175 AAGACAC-AGTCGTTCTCGACGTACGCCGACAACCAATCCGGAGTGTTGATCCAGGTGTT 5117 Query 196615 TGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG-AACTTTCGATTTGACGG 196673 ||| || |||||| | | | ||||||||||| || || || ||| | ||| | Sbjct 5116 TGAGGGCGAACGCACGATGACGCACGATAACCATCTTCTGGGCAAGTTTAACCTGGAC-G 5058 Query 196674 GGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAA 196733 | || || | || | ||||| || || ||| | || || ||| | |||| | Sbjct 5057 GCATCCCGCCCATGCCGCGTGGTGTGCCTCAAATTGACGTGACGTTTGATGTCGACGTCA 4998 Query 196734 ATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGA 196793 |||| ||| | ||||| | |||| || ||| | | ||||| || ||||| || Sbjct 4997 ATGGCATTTTGAACGTGTCGGCTGTAGAGAAGTCGACCGGCAAGGAGGACAAGATCACGA 4938 Query 196794 TTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGG 196853 | || || ||||| || || || || ||| || || || || ||||| || || | Sbjct 4937 TCACGAACGACAAAGGCCGACTGTCGCAGGCCGATATCGATCGCATGGTCGCCGACGCAG 4878 Query 196854 AAAAGTACAGGGAAGAAGACGA 196875 | ||||||| ||| |||| || Sbjct 4877 AGAAGTACAAGGACCAAGATGA 4856 >seq4411 Length=1791 Score = 408 bits (452), Expect = 6e-109 Identities = 1033/1566 (66%), Gaps = 10/1566 (1%) Strand=Plus/Minus Query 195317 GGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAAT 195376 || || |||||||| || || || || ||||| || || ||||| ||||| ||| | || Sbjct 1763 GGCACGACTTACTCGTGCGTGGGCGTGTGGCAGAACGACCGTGTGGAGATCATCGCCAAC 1704 Query 195377 GACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTT 195436 ||||| || ||||| || || ||||||||||| || || || || | || ||||| | Sbjct 1703 GACCAGGGCAACCGCACCACGCCATCGTACGTGGCGTTCACGGACACCGAGCGTCTGATC 1644 Query 195437 GGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAG 195496 || |||||||| || || ||| || |||||| | ||| || || || ||||| ||| Sbjct 1643 GGTGATGCCGCCAAGAACCAGGTGGCCATGAACGCGCACAACACGGTGTTCGACGCCAAG 1584 Query 195497 CGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGGTCT 195556 || || || || |||||||| ||||| || ||||| || || ||| ||||| | Sbjct 1583 CGCCTCATCGGCCGCAAGTTCTCGGACCCGATCGTCCAGTCGGACATCAAGCACTGGCCG 1524 Query 195557 TATGAAGTTGTTCCCGGTG--TGGCTGATAAGCCTATGATTAATGTTGAATTTCACGGTG 195614 | | ||| || ||| |||| || ||||| ||| | || | || | || | Sbjct 1523 T-TCAAGCTGACGTCGGGCGCTGGC-GACAAGCCGCAGATCACGGTGCAGTTCAAGGGCG 1466 Query 195615 AGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGA 195674 || ||| || ||||| || || ||||| |||||| |||| |||||| ||| Sbjct 1465 AGTCGAAGACGTTCCAGCCCGAGGAGATCTCGTCCATGGTGCTGATCAAGATGCGCGAGG 1406 Query 195675 CTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACT 195734 || || | ||||| ||||| ||||| | || || | || || || || |||| Sbjct 1405 TGGCCGAGGCCTTCATCGGTAAGGAGGTGAAGAACGCCGTGATCACGGTGCCGGCCTACT 1346 Query 195735 TCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTC 195794 ||| || || || || ||||| || |||||||||| ||| ||||| || || ||| | Sbjct 1345 TCAACGACTCGCAGCGTCAGGCCACCAAGGACGCTGGTGCCATTGCTGGCCTGAACGTGC 1286 Query 195795 TTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGG 195854 | | || ||||| || || ||||| ||||| |||||||| |||||||||||| |||| Sbjct 1285 TGCGTATCATCAACGAGCCGACAGCCGCTGCTATTGCTTACGGTCTGGACAAG---AAGG 1229 Query 195855 ACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTC 195914 || || || || | || || || || || || ||||| || ||||| || || | Sbjct 1228 GCGGCGAGCGCAACGTGCTTATTTTCGACCTGGGCGGCGGTACCTTCGATGTGTCGCTGC 1169 Query 195915 TCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTG 195974 | | ||||| | || || ||||| || ||||| || |||||||| || || || |||| Sbjct 1168 TGAGCATTGAGGAGGGCATCTTCGAGGTGAAGGCGACGGCTGGTGACACGCACCTGGGTG 1109 Query 195975 GTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATA 196034 |||| || ||||| ||||| | || || | | |||||| || || | Sbjct 1108 GTGAGGACTTCGACAACCGTCTGGTGGACCACTTCACGCAGGAGTTCAAGCGCAAACACC 1049 Query 196035 AGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTG 196094 || || || | | || | | ||||||||||| || ||||||| || || |||| Sbjct 1048 GCAAGGACATCACGGAGAACCAGCGTGCTCTTCGTCGTCTGCGGACTGCTTGCGAGCGTG 989 Query 196095 CCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACG 196154 | || || || || || || |||| || | | ||||| || ||| |||| || | Sbjct 988 CGAAGCGTACACTGTCGTCGTCGGCGCAGGCGTACATCGAGATCGACTCGCTGTTCGATG 929 Query 196155 GAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGT 196214 | ||||||||| | | || || || || || ||||| || || | | || | | Sbjct 928 GCATTGACTTCAACTCGACCATCACGCGCGCGCGTTTCGAGGACATGTGCGGCGACTACT 869 Query 196215 TTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTA 196274 | | ||| ||||| || || || | || || || ||||| ||| || ||| Sbjct 868 TCCGCAAGACAATGGAGCCCGTGGAGAAGGTGCTGCGCGACGCGAAGCTGTCCAAGAGCC 809 Query 196275 AGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGC 196334 |||| | || | || || || || || || ||||||||||| ||| | || ||| ||| Sbjct 808 AGGTGCACGAGGTGGTGCTGGTCGGTGGCTCCACCCGTATTCCCAAGGTGCAGCAGCTGC 749 Query 196335 TTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTG 196394 | || ||||||||| || || ||||| ||||||||||||| || || || | Sbjct 748 TGTCAGACTTCTTCAACGGCAAGGAGCCCAACAAGTCGATCAACCCGGACGAGGCCGTGG 689 Query 196395 CTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGAC---AATAATAACGTCC 196451 | || || || | || ||||| || || || || ||| | || | | Sbjct 688 CGTACGGCGCCACGGTGCAGGCGGCCATCCTGAGCGGCAACGACTCGTCGGAGAAGCTGC 629 Query 196452 AAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTG 196511 | || || ||||| |||||||| | || | || |||||||| || || || || |||| Sbjct 628 AGGACCTGCTGCTGCTTGATGTGACGCCGCTGTCGCTGGGTCTGGAGACGGCCGGGGGTG 569 Query 196512 TTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTT 196571 | ||||| | | || | | ||||| || | ||||| |||||| || || | Sbjct 568 TCATGACCACGCTGATCGCGCGTAACACGACGGTGCCGACCAAGAAGTCGCAGACGTTCT 509 Query 196572 CAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCC 196631 | ||||| | || || || || ||||| | ||||| || | || || || || ||| Sbjct 508 CGACGTACGCGGACAACCAGCCGGGTGTGCTCATTCAGGTGTTCGAGGGCGAGCGGTCCA 449 Query 196632 GTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCA 196691 || || ||| | || || || | ||| | ||| || || || | || Sbjct 448 TGACACGTGACAACAACCTGCTGGGCAAGTTCAACTTGGACGGCATCCCGCCCATGCCTC 389 Query 196692 GAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCA 196751 | || || || ||||| | || ||||| || || || || || || || ||||| Sbjct 388 GCGGCGTGCCGCAGATCGACGTGACGTTCGACATTGATGCGAACGGCATCCTGAACGTGT 329 Query 196752 CAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGC 196811 | || | ||| ||| | | ||||| | ||||| ||| || || |||||||||| Sbjct 328 CGGCCGTGGAGAAGTCGACGGGCAAGGAGAACAAGATCACGATCACGAACGACAAGGGGC 269 Query 196812 GGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAG 196871 | || || ||| || ||||| || ||||| || || || ||||||| | || | Sbjct 268 GTCTGTCGCAGGCTGACATTGACCGCATGGTGTCTGAGGCCGAGAAGTACAAGTCGGAGG 209 Query 196872 ACGAGG 196877 |||||| Sbjct 208 ACGAGG 203 >seq290 Length=35206 Score = 140 bits (154), Expect = 4e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || ||||| || || || ||| |||| Sbjct 14669 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACGATCACGCTTGACGTGGAGCCGTCG 14728 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || ||||||||||||||||||||||| || || || ||| Sbjct 14729 GACTCGATCGACAACGTGAAGCAGAAGATTCAAGATAAGGAAGGCATCCCGCCTGACCAG 14788 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| || || || ||||| || ||||| || || || || || || || |||||| Sbjct 14789 CAACGCCTGATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGCACTCTGAGCGACTACAAC 14848 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| || || ||||| || || Sbjct 14849 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCT 14880 Score = 140 bits (154), Expect = 4e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || ||||| || || || ||| |||| Sbjct 14897 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACGATCACGCTTGACGTGGAGCCGTCG 14956 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || ||||||||||||||||||||||| || || || ||| Sbjct 14957 GACTCGATCGACAACGTGAAGCAGAAGATTCAAGATAAGGAAGGCATCCCGCCTGACCAG 15016 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| || || || ||||| || ||||| || || || || || || || |||||| Sbjct 15017 CAACGCCTGATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGCACTCTGAGCGACTACAAC 15076 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| || || ||||| || || Sbjct 15077 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCT 15108 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | || || || || ||||| || || || ||| |||| Sbjct 15125 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACGATCACGCTTGACGTGGAGCCGTCG 15184 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || ||||||||||||||||||||||| || || || ||| Sbjct 15185 GACTCGATCGACAACGTGAAGCAGAAGATTCAAGATAAGGAAGGCATCCCGCCTGACCAG 15244 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| || || || ||||| || ||||| || || || || || || || |||||| Sbjct 15245 CAACGCCTGATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGCACTCTGAGCGACTACAAC 15304 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || || || || || || | ||||| || || Sbjct 15305 ATCCAGAAGGAGTCGACGCTGCATCTGGTGCTGCGTCTTCGCGGCGG 15351 >seq911 Length=16908 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || || || || || || ||||| || || || ||| |||| Sbjct 5985 ATGCAGATCTTCGTGAAGACTCTGACCGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 6044 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || || || || ||||||||||| || ||||| ||| Sbjct 6045 GACTCGATCGACAACGTGAAGCAGAAAATCCAGGACAAGGAAGGCATCCCGCCCGACCAG 6104 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || ||| | || || || || || ||||| || || || ||||| | ||| |||||| Sbjct 6105 CAGCGATTAATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGTTGAGTGACTACAAC 6164 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || || ||||| || || | || || ||||| Sbjct 6165 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGTGG 6211 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || || || || || || ||||| || || || ||| |||| Sbjct 6213 ATGCAGATCTTCGTGAAGACTCTGACCGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 6272 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || || || || ||||||||||| || ||||| ||| Sbjct 6273 GACTCGATCGACAACGTGAAGCAGAAAATCCAGGACAAGGAAGGCATCCCGCCCGACCAG 6332 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || ||| | || || || || || ||||| || || || ||||| | ||| |||||| Sbjct 6333 CAGCGATTAATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGTTGAGTGACTACAAC 6392 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || || ||||| || || | || || ||||| Sbjct 6393 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGTGG 6439 Score = 131 bits (144), Expect = 2e-25 Identities = 174/241 (72%), Gaps = 3/241 (1%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || || || || || || ||||| || || || ||| |||| Sbjct 6441 ATGCAGATCTTCGTGAAGACTCTGACCGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 6500 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||| | ||||| ||| | || || || || || ||||||||||| || ||||| ||| Sbjct 6501 GACTCGATCGACAACGTGAAGCAGAAAATCCAGGACAAGGAAGGCATCCCGCCCGACCAG 6560 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || ||| | || || || || || ||||| || || || ||||| | ||| |||||| Sbjct 6561 CAGCGATTAATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACGTTGAGTGACTACAAC 6620 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGCAACCGACGAA 172101 | || |||||||| || || ||||| || || || || | |||||| || | | ||| Sbjct 6621 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCT---GCGTCTGCGTGGTGGAAACTAAGAA 6677 Query 172102 G 172102 | Sbjct 6678 G 6678 >seq35 Length=107654 Score = 125 bits (138), Expect = 9e-24 Identities = 256/378 (68%), Gaps = 2/378 (1%) Strand=Plus/Plus Query 195611 GGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAG 195670 || |||||| || || || |||||||| | || |||||||| | | ||||||||| Sbjct 44365 GGCGAGAAGCGCCAGTTCGCCCCCGAAGAGGTATCAGCTATGGTGCTCACCAAGATGAAG 44424 Query 195671 GAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCT 195730 ||| | || | ||| || ||| ||||| || ||||| || ||||| Sbjct 44425 CAGATCTCCGAGGGATACATCGGCCGCGAGGTGTTCGATGCCGTCGTGACGGTGCCTGCC 44484 Query 195731 TACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAAC 195790 ||||||| || | || || ||||| || |||||||||| | ||||| ||||| | | Sbjct 44485 TACTTCAACGACGCCCAGCGTCAGGCTACCAAGGACGCTGGCACCATTGCCGGTCTGA-C 44543 Query 195791 TGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849 |||| | || ||||| || || || || ||||||||||| ||||| | |||||||| Sbjct 44544 TGTCCAGCGTATCATCAACGAGCCCACGGCTGCTGCAATTGCCTATGGCATTGACAAGAA 44603 Query 195850 CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTC 195909 | | | || || || || || |||| |||||||| || ||||| || ||||| | Sbjct 44604 GGCGCAGGGCGAGAAGAACGTGCTGGTCTTCGATCTCGGCGGCGGTACCTTCGATGTGAC 44663 Query 195910 ACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCT 195969 || || ||||| || || | ||||| || ||| || ||| || || || | Sbjct 44664 GCTGCTGGCCATTGACGGCGGAGTGTTCGAGGTGCTGGCCACCAATGGAGACACGCACTT 44723 Query 195970 AGGTGGTGAAGATTTCGA 195987 || || || || ||||| Sbjct 44724 GGGCGGCGAGGACTTCGA 44741 Score = 120 bits (132), Expect = 4e-22 Identities = 318/480 (66%), Gaps = 8/480 (2%) Strand=Plus/Plus Query 196376 AACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTT 196435 ||||| ||||| || || || || ||||| ||||| |||| | ||| || |||| | Sbjct 45130 AACCCCGATGAGGCCGTCGCCTACGGTGCTGCCGTGCAGGGCGGTATCCTT---GGTGGT 45186 Query 196436 GACAATAATAACGT--CCAAGATCTT-CTGCTACTTGATGTTGCACCCGTATCCCTGGGT 196492 || | | || | ||||| | | || || ||||||| | || | |||| |||| Sbjct 45187 GAGCAGGACGACCTGACCAAGGACGTGCTTCTGATTGATGTGGTGCCTCTGTCCCAGGGT 45246 Query 196493 CTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACT 196552 |||| || | |||||| || ||||| || | || | | ||||| |||||||| Sbjct 45247 ATTGAGACTGTGGGTGGCGTCATGACCAAGCTCATCAACCGTAACACTGTGATTCCGACC 45306 Query 196553 AAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTA 196612 |||||| || ||| || || || || || || || | ||| | || || || Sbjct 45307 AAGAAGTCGCAGACCTTCTCGACCTACCAGGACAACCAGCCTGCTGTGCTGATCCAGGTG 45366 Query 196613 TATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGAC 196671 | || || || || | | || | ||||| |||| ||| || || | ||||| |||| Sbjct 45367 TTCGAGGGCGAGCG-TGCGATGACCAAGGACAACCGTCTTCTCGGCAAGTTCGAGCTGAC 45425 Query 196672 GGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGC 196731 || | || |||| || | ||||| || |||||| | || ||||| || ||||| Sbjct 45426 TGGTCTGCCGCCTGCCCCGCGTGGTGTGCCGCAGATTGAGGTGACGTTCGAGATTGACGC 45485 Query 196732 AAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGT 196791 ||||| || || | || | ||||||||||||| | ||||| | || | ||| Sbjct 45486 CAATGGTATCCTGCAGGTGTCCGCTGAGGACAAGGGCACGGGCAAGGCCGAGACGATCAC 45545 Query 196792 GATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 ||| || ||| ||||| || || || ||||||| || || || ||||| || || || Sbjct 45546 GATCACTGCTGAGAAGGGCCGTCTGTCGCAGGAGGAGATCGACCGCATGGTCCAGGAGGC 45605 >seq97 Length=59640 Score = 113 bits (124), Expect = 6e-20 Identities = 337/511 (66%), Gaps = 17/511 (3%) Strand=Plus/Plus Query 198450 TTCAAGGATGTTGAGGGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGTTGATTTT 198509 || |||||||| | ||| | ||| || ||| | ||| || |||| | ||||| || Sbjct 40522 TTTAAGGATGTGGCCGGTGTGGACGAGGCCAAGAAGGAGATCATGGAGTTCGTTGACTTC 40581 Query 198510 CTTAAAAACCCCGAAAAG-TACTATGGAAGTGGTGCCCGAATCCCACGTGGTGCTCTTCT 198568 ||| |||| ||| | | | || ||||||| ||||| ||||| || || Sbjct 40582 CTTCGCAACCA-GAAGCGCTTCACTGAGCTTGGTGCCAAGATCCCCAAGGGTGCGCTGCT 40640 Query 198569 CGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAG 198628 | || | || ||||| ||||| || || || || || | || |||||| | || Sbjct 40641 TGTTGGCCCGCCCGGTACGGGTAAGACGCTGCTGGCGAAGGCCACTGCTGGTGAAGCTAG 40700 Query 198629 TGTCCCCTTTCTTCAGTGCTCCGCGG-CGAGTTTCATCGAGATGTTCGTTGGTGTTGGTG 198687 || || || |||||| | | | || |||||||||||||||||| ||||| ||| Sbjct 40701 CGTGCCGTT-CTTCAGCATTTCTGGTTCGGATTTCATCGAGATGTTCGTCGGTGTGGGTC 40759 Query 198688 CTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATCATCTTCA 198747 | || || || || || || || | || |||| || ||||| || | |||| Sbjct 40760 CGTCACGTGTGCGTGACCTGTTCAAGGAGGCCCGTGCGAACGCTCCATGCATTGTGTTCA 40819 Query 198748 TTGATGAGATTGACGCTGTTG-----GTAAGAAGCGTGGTGGAACTACTACACCTGGTAA 198802 ||||||| ||||| ||||| | | | ||||| || | |||| || | || || Sbjct 40820 TTGATGAAATTGATGCTGTGGCGCGTGCACGAAGCAAGG-GCAACTTCT-CGGGCGGCAA 40877 Query 198803 TGATGAGCGTGAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGAC---AA 198859 || |||||||| | ||| ||||||| || || |||||||||||||| || | Sbjct 40878 CGACGAGCGTGAAAACACGCTTAACCAACTGCTGGTCGAGATGGATGGTTTCAACTCGAG 40937 Query 198860 TGAGACTGGTATCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGCACT 198919 ||| ||| | |||||| |||| | || || | |||||| || || | || | Sbjct 40938 TGA---AGGTGTGGTGGTGCTTGCAGGCACGAACCGTGCTGATATTCTTGACAAGGCCAT 40994 Query 198920 GCTTCGTCCCGGTCGATTCGACCGTAAGATT 198950 || ||||| |||||||||||| | ||||| Sbjct 40995 TCTGCGTCCTGGTCGATTCGACAGGCAGATT 41025 >seq2038 Length=6223 Score = 109 bits (120), Expect = 7e-19 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || ||||| || ||||| || || || ||| |||| Sbjct 612 ATGCAGATCTTTGTGAAGACCCTGACGGGAAAGACCATCACGCTGGACGTGGAGCCGTCC 671 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 |||| || || || |||| || || || || ||||| || || || || || ||| Sbjct 672 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAGGGAATCCCGCCTGACCAG 731 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || ||||| | || |||||| Sbjct 732 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGTCGGACTACAAC 791 Query 172042 GTTCAAAAGG 172051 | || |||| Sbjct 792 ATCCAGAAGG 801 >seq698 Length=19504 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/71 (90%), Gaps = 4/71 (6%) Strand=Plus/Plus Query 167232 GTGGGGTTTGAACCCACG-AGACTTG--CGTC-AGCGGGTCTTAAGTCCGCCCCCTTAGA 167287 |||||||||||||||||| ||||| |||| ||||| ||||||||||||||||||||| Sbjct 8942 GTGGGGTTTGAACCCACGCAGACTGTAACGTCTAGCGGATCTTAAGTCCGCCCCCTTAGA 9001 Query 167288 CCACTCGGGCA 167298 ||||||||||| Sbjct 9002 CCACTCGGGCA 9012 >seq196 Length=72114 Score = 86.0 bits (94), Expect = 8e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 182907 TGGGCCACAGATGCATCTCGGACATTCTTACACTTTCCCCGAAGTGGAAAGACGCCGTAA 182966 || |||||||||||||| || ||||| || || || || ||||| |||||||| Sbjct 57861 TGCGCCACAGATGCATCGCGCACATTGAGGAGTTTACCACGGAGAGGAAAAACGCCGTAC 57802 Query 182967 TGATCCCTTCCAACAACAGAGAGGCCAGCGACAGCGAGTGTCTTTGCCGAGTCACCCTCT 183026 || || | |||||||| | || ||||| ||||| |||| ||| || || ||||| || Sbjct 57801 TGGTCACGCCCAACAACTGCAAGACCAGCCACAGCCAGTGCCTTGGCTGAATCACCTTCA 57742 Query 183027 GTCACGATGAGTGTACA 183043 |||| ||| || | ||| Sbjct 57741 GTCAAGATAAGCGAACA 57725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657812846514720