Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20taxon_20totara_20[genbank_20GCA_5F001314925.1_202015- 10-14] 6,026 sequences; 54,902,777 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq505 87.8 2e-12 >seq505 Length=25211 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/160 (73%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 22088 GAGAGCG-AGATCTTCATAGGACCCACATATTACCACAGACTCAAACATATGGTCAAGGA 22146 || |||| |||||||||| |||||||| | ||||| | || || ||||||||| | || Sbjct 16684 GACAGCGCAGATCTTCATCGGACCCACGTTCTACCAGCGCCTGAAGCATATGGTCGACGA 16743 Query 22147 CAAGATGCACGCCCGATCCCACGGCCAGGTGACGACGTTGCACCGGCAGCCGAACTGTGG 22206 |||||| ||| | || || | |||| ||||| | | || || ||||| | || Sbjct 16744 CAAGATCCACTCGCGCTCGCGTGGCCCTGTGACCATGCTGACGCGCCAGCCCATGGAGGG 16803 Query 22207 GCGTGCTCAGGGCGGCGGGCTGCGGTTCGGAGAGATGGAG 22246 ||||||| | || |||||||| | |||||||||||| Sbjct 16804 TCGTGCTCGTGAGGGTGGGCTGCGTATGGGAGAGATGGAG 16843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521506314577680