Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20x_20alni_20[genbank_20GCA_5F000439335.1_202013-07-23] 118,474 sequences; 235,999,877 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq94487 271 1e-67 seq110124 219 8e-52 seq76529 179 7e-40 seq98218 174 3e-38 seq66249 138 2e-27 seq110277 127 4e-24 seq72340 122 2e-22 seq107880 113 9e-20 seq64259 87.8 3e-12 seq43628 84.2 4e-11 >seq94487 Length=3660 Score = 271 bits (300), Expect = 1e-67 Identities = 385/536 (72%), Gaps = 18/536 (3%) Strand=Plus/Plus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| || | || ||| | ||| ||||||||||||||| || ||| |||||| || Sbjct 24 GATCCAGGAGCACGACGTGTGGCAGATGTACAAGAAGGCGGAGGCCTCGTTCTGGACGGC 83 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 ||||||| | ||||||| | ||| | ||||| | ||| | || ||||| Sbjct 84 CGAGGAGCTGGACCTGGTGCACGACCTCAAGGACTGGGCGAACCTGACGGATAACGAGCG 143 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 ||| ||| |||| || | |||||||||||||| ||| |||||||| || || ||||| Sbjct 144 GTTCTTCATCAAGCACGTGCTGGCCTTCTTCGCTGCCAGCGACGGCATCGTGAACGAGAA 203 Query 42464 CCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTT 42523 |||||||| | |||| || ||||||||| ||||| |||||||||||||| || Sbjct 204 CCTGGCCATGAACTTCAGCAATGAGGTGCAGGTGCCGGAGGCCCGCTGCTTCTACGGTTT 263 Query 42524 CCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTA 42580 ||||| ||||| |||||| | ||||| ||||||||| | ||||||| ||||||| Sbjct 264 TCAGATCGCCATCGAGAACATCCACTCGGAGGTGTACTC---GCTGCTCATTGACACGTA 320 Query 42581 CATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCAT 42640 |||| |||| | ||| || ||| | ||||| || ||||| || || | Sbjct 321 CATCAAGGATGCGACGGAGAAGGACCACCTGCTGCGTGCCATCGATACGATCCCGTGTGT 380 Query 42641 CAAGAAGAAGGCGGACTGGGCGCTCAACTGG-----ATCGAGAGTCCCGACGCAACGTTC 42695 |||||||| ||| ||||||||||||| ||| || |||| || || | | | Sbjct 381 GAAGAAGAAAGCGCACTGGGCGCTCAAGTGGTGCAACCCGCGAGTGTCGTCGTACC---C 437 Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 | ||| | ||| | || ||| | ||||| ||||||||||||||||||||| | ||| | Sbjct 438 G--GAGCGTCTGCTGGCGTTTGCAGCCGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGC 495 Query 42756 TCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 |||||||||||||||||| || || || ||||| || || | ||||||||||| Sbjct 496 TCCATCTTCTGGCTCAAGAAGCGCGGCCTC-ATGCCTGGCCTGAGCTTCTCGAACG 550 Score = 178 bits (196), Expect = 2e-39 Identities = 226/310 (73%), Gaps = 6/310 (2%) Strand=Plus/Plus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| || | || ||| | ||| ||||||||||||||| | ||| |||||| || Sbjct 2954 GATCCAGGAGCACGACGTGTGGCAGATGTACAAGAAGGCGGAAGCCTCGTTCTGGACGGC 3013 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 ||||||| | ||||||| | ||| | ||||| | ||| | || ||||| Sbjct 3014 CGAGGAGCTGGACCTGGTGCACGACCTCAAGGACTGGGCGAACCTGACGGACAACGAGCG 3073 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 ||| ||| |||| || | |||||||||||||||||| |||||||| || || ||||| Sbjct 3074 GTTCTTCATCAAGCACGTGCTGGCCTTCTTCGCCGCCAGCGACGGCATCGTGAACGAGAA 3133 Query 42464 CCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTT 42523 |||||||| | |||| || || |||||| ||||| |||||||||||||| || Sbjct 3134 CCTGGCCATGAACTTCAGCAATGAAGTGCAGGTGCCGGAGGCCCGCTGCTTCTACGGTTT 3193 Query 42524 CCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTA 42580 |||||| ||||| |||||| | ||||| |||||||| | ||||||| ||||||| Sbjct 3194 CCAGATCGCCATCGAGAACATCCACTCGGAGGTGTATTC---GCTGCTCATTGACACGTA 3250 Query 42581 CATCCTGGAT 42590 |||| |||| Sbjct 3251 CATCAAGGAT 3260 Score = 132 bits (146), Expect = 9e-26 Identities = 159/212 (75%), Gaps = 12/212 (6%) Strand=Plus/Plus Query 42642 AAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGA-----GAGTCCCGACGCAACGTTCG 42696 |||||||| ||| ||||||||||||| ||| ||| |||| || || | | || Sbjct 606 AAGAAGAAAGCGCACTGGGCGCTCAAGTGGTGCGACCCGCGAGTGTCGTCGTACC---CG 662 Query 42697 GCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCT 42756 | || | ||| | || || | ||||| ||||| ||||||||||||||| | ||| || Sbjct 663 G--AGCGTCTGCTGGCGTTCGCAGCCGTGGAGGGTATCTTCTTCTCGGGCTCGTTCTGCT 720 Query 42757 CCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTC 42815 ||||||||||||||||| || || || ||||| || || | |||||||||||| || Sbjct 721 CCATCTTCTGGCTCAAGAAGCGCGGCCTC-ATGCCTGGCCTGAGCTTCTCGAACGAGCTG 779 Query 42816 ATCAGCAGGGACGAGGGGCTGCATAGGGACTT 42847 |||||| | |||||||| |||| | |||||| Sbjct 780 ATCAGCCGTGACGAGGGCATGCACACGGACTT 811 Score = 113 bits (124), Expect = 9e-20 Identities = 147/199 (74%), Gaps = 12/199 (6%) Strand=Plus/Plus Query 42618 GCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGA- 42676 ||||| || ||||| || || | |||||||| ||| ||||||||||||| ||| ||| Sbjct 3468 GCCATCGATACGATCCCGTGTGTGAAGAAGAAAGCGCACTGGGCGCTCAAGTGGTGCGAC 3527 Query 42677 ----GAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCA 42732 |||| || || | | ||| || | ||| | || || | ||||| ||||| | Sbjct 3528 CCGCGAGTGTCGTCGTACC---CGG--AGCGTCTGCTGGCGTTCGCAGCCGTGGAGGGTA 3582 Query 42733 TCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCC 42791 |||||||||||||| | ||| ||||||||||||||||||| || || || ||||| Sbjct 3583 TCTTCTTCTCGGGCTCGTTCTGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTC-ATGCCT 3641 Query 42792 GGACTCACCTTCTCGAACG 42810 || || | ||||||||||| Sbjct 3642 GGCCTGAGCTTCTCGAACG 3660 >seq110124 Length=2655 Score = 219 bits (242), Expect = 8e-52 Identities = 556/839 (66%), Gaps = 40/839 (5%) Strand=Plus/Minus Query 244103 AACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCC 244162 ||||| || | |||||| ||||| | ||| | |||| || |||||||||| ||| Sbjct 808 AACTCGCCAGCCAGCACTCGGCGGTTGTACATGTTGGACGTGTACGGCTCGATGGACTCG 749 Query 244163 GTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTC 244222 ||||||| || ||||| ||||| || ||||||||||| | ||||||||| ||| Sbjct 748 TTGTTGCCGAGGATCTGGGCCGTCGAAGCCGTCGGCATGGGGGCCACCAGCAGCGAGTTG 689 Query 244223 CTCACGCCGTGCCTCTGGATG-CGGAGTC--TGAGCTCGTTCCAGTCCCACATGCCCGAG 244279 | || |||||| | ||| || || ||||| ||||| |||||| ||||| Sbjct 688 CGCAGTCCGTGCTT---GATCACGTCCTCCTTGAGCGTAGCCCAGTTCCACATACCCGA- 633 Query 244280 AGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTG 244339 | || | | || |||||||||||| ||||| | | |||||||| | || | Sbjct 632 ----CGACGGGGT-GACGCCCCACATGTCGAACTGGAAGATGCCCTTGCTAGCAGGCGAG 578 Query 244340 CCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCT-CTCGTCGAGGGC 244398 |||| | | ||| ||| || ||| || ||| | || || | | || | ||| Sbjct 577 CCCTGGAACGTCTCGTACGGGCCGAGTTCCTTGGCAATCTC-CATCGACGTCTCCATGGC 519 Query 244399 GGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAA 244458 |||| ||||||||||||||||||| ||||||| | || |||||||| ||| ||| Sbjct 518 GGCGAAGTAGATGGTCTCGAAGATGTTCTTGTTGAGCTCCCGGGCCTTCTCGCTCTCGAA 459 Query 244459 GGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCT 244518 | | | ||| | || || |||| || || ||||| ||||| || || ||||| | Sbjct 458 CGCGTAGTTCATGAGGATAAACGCGTCCGCGAGGCCCTGGACGCCAATACCAATGGGGCG 399 Query 244519 GTGTCGCTTGTTGGA---GCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCAC 244575 ||| ||| ||||||| |||| || ||| |||||||| ||||| ||||||| || Sbjct 398 GTGACGCATGTTGGACTTGCGC---GCCTCGATGACGGGGTAGTAGTTGACGTCGATGAC 342 Query 244576 CTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTC 244635 |||||| ||||| ||||||| || | || || || | ||| ||| | | | Sbjct 341 CTTGTTCAGGTTACGGGTGACCACCTTGGTCACCTCATACAACTTCTGGTAGTTGAAAAC 282 Query 244636 GTAGGGATCCTCGGCGATGGTGATCCT-CACAAACTCGTTGAGGGCGACGCTGGCCAGGT 244694 |||| |||| ||| |||| || || || |||| || Sbjct 281 -------TCCT------------TCCTCCACGAACTTAGGCAGCGCCACAGACGCCAAGT 241 Query 244695 TGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGC 244754 |||| || |||||||| |||| ||||||| | | ||| ||| | ||| ||| Sbjct 240 TGCACACAGCCACCTCGTCCGGCGACGTGTACTCCATGACCTCACAGCATAAGTTGCTGG 181 Query 244755 ACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCA 244814 | ||| ||||| |||| ||| || || |||||| |||| ||||||||||| | || Sbjct 180 AGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGGCCGCGTCCTTGTACAACA 121 Query 244815 TGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCT 244874 | |||||| | || ||||||| ||||||| | | | | ||| || | | || | Sbjct 120 TAAAGGGCACTCCCGTCTCGATCTGGGCGTCCAATATGGCAAACCACAGCTGCTGGGCGT 61 Query 244875 TGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCG 244933 ||| |||| |||| || ||||| | |||||| || ||||||||||| ||| Sbjct 60 TGATCGTCTTGCGGGCGCGTCCCTCCGTCTCGTACTTTTCATAGAGGGCCTCGAATTCG 2 >seq76529 Length=2445 Score = 179 bits (198), Expect = 7e-40 Identities = 453/685 (66%), Gaps = 34/685 (5%) Strand=Plus/Plus Query 244164 TGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCC 244223 ||||||| || ||||| ||||| || ||||||||||| | ||||||||| ||| | Sbjct 1114 TGTTGCCGAGGATCTGGGCCGTTGAAGCCGTCGGCATGGGGGCCACCAGCAGCGAGTTGC 1173 Query 244224 TCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGT 244283 || |||||| | | | || |||| ||||| ||||| ||||| Sbjct 1174 GCAGCCCGTGCTTGACCACGTCCTGTTTGAGGGTAGCCCAGTTCCACAGACCCGA----- 1228 Query 244284 CCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCT 244343 | || | | || |||||||||||| ||||| | | ||||||||| | || ||||| Sbjct 1229 CGACGGGGT-GACGCCCCACATGTCGAACTGGAAGATGCCCTTGCTGGCAGGCGAGCCCT 1287 Query 244344 CGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCT-CTCGTCGAGGGCGGCG 244402 | | ||| ||| || ||| || ||| | || || | | || | ||| || Sbjct 1288 GGAACGTCTCGTACGGGCCGAGTTCCTTGGCGATCTC-CATCGACGTCTCCATGGCAGCA 1346 Query 244403 TAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGG 244462 ||||||||||||| ||||| ||||||| | || || ||||| ||| ||| | | Sbjct 1347 AAGTAGATGGTCTCAAAGATGTTCTTGTTGAGCTCCCGAGCCTTCTCGCTCTCGAACGCG 1406 Query 244463 ATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGT 244522 | ||| | || || |||| || || ||||| ||||| || |||||||| | ||| Sbjct 1407 TAGTTCATGAGGATAAACGCGTCCGCGAGGCCCTGAACGCCAATACCGATGGGACGGTGA 1466 Query 244523 CGCTTGTTGGA---GCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTG 244579 ||| ||||||| |||| || ||| ||||||||| ||||| ||||||| |||||| Sbjct 1467 CGCATGTTGGACTTGCGC---GCCTCGATCACGGGGTAGTAGTTGACGTCGATGACCTTG 1523 Query 244580 TTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAG 244639 || | ||||||||||| || | || ||| || | ||| ||| | | | Sbjct 1524 TTTAAGTTGCGGGTGACCACCTTGGTCACTTCGTACAACTTCTGGTAGTTGAAAAC---- 1579 Query 244640 GGATCCTCGGCGATGGTGATCCT-CACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCA 244698 |||| |||| ||| |||| | || || || || | |||||| Sbjct 1580 ---TCCT------------TCCTCCACGAACTTGGGCAGCGCCACAGACGCTAAGTTGCA 1624 Query 244699 GACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTT 244758 || |||||||| |||| ||||||| | | ||| ||| | ||| ||| | Sbjct 1625 CACAGCCACCTCGTCCGGCGACGTGTACTCCATCACCTCACAGCATAAGTTGCTGGAGCG 1684 Query 244759 GATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAA 244818 ||| ||||| |||| ||| || || |||||| |||| ||||||||||| | ||| || Sbjct 1685 GATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGGCAGCGTCCTTGTACAACATAAA 1744 Query 244819 GGGCCCCCCGGTCTCGAGCTGGGCG 244843 |||| | || ||||||| ||||||| Sbjct 1745 GGGCACTCCCGTCTCGATCTGGGCG 1769 >seq98218 Length=3782 Score = 174 bits (192), Expect = 3e-38 Identities = 206/277 (74%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| || | || || | ||| ||||||||||||||| || ||| |||||| || Sbjct 2610 GATCCAGGAGCACGAYGTGTGGCAGATGTACAAGAAGGCGGAGGCCTCGTTCTGGACGGC 2551 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 ||||||| | ||||||| | ||| | | ||||| | ||| | || ||||| Sbjct 2550 CGAGGAGCTGGACCTGGTGCACGACCTGAAGGACTGGGCGAACCTGACGGACAACGAGCG 2491 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 ||| ||| |||| || | |||||||||||||| ||| ||||||||| || || ||||| Sbjct 2490 GTTCTTCATCAAGCACGTGCTGGCCTTCTTCGCTGCCAGTGACGGCATCGTGAACGAGAA 2431 Query 42464 CCTGGCCACCAGGTTCATGAAAGAGGTGCAG-TACTTTGAGGCGCGCTGCTTCTACGGCT 42522 |||||||| | |||| || || |||||| ||| ||||| |||||||||||||| | Sbjct 2430 CCTGGCCATGAACTTCAGCAATGAAGTGCAGGTACCG-GAGGCCCGCTGCTTCTACGGTT 2372 Query 42523 TCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTA 42559 ||||||| || || |||||| | ||||| |||||||| Sbjct 2371 TCCAGATCGCGATCGAGAACATCCACTCGGAGGTGTA 2335 Score = 172 bits (190), Expect = 1e-37 Identities = 255/359 (71%), Gaps = 7/359 (2%) Strand=Plus/Minus Query 42786 ATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGAC 42845 ||||| || || | |||||||||||| || |||||| | |||||||| |||| | |||| Sbjct 1935 ATGCCTGGCCTGAGCTTCTCGAACGAGCTGATCAGCCGTGACGAGGGCATGCACACGGAC 1876 Query 42846 TTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGG 42905 || || |||||| ||| ||| | | || | |||||| || || || || | Sbjct 1875 TTCGCGTGCCTCATGTACTCCA---AGCTGGTGAACAAGCTGCCGGAGAGCCGCGTGCAC 1819 Query 42906 GCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTG 42965 | ||| | || || ||| ||||||| | |||||| | | ||||| || ||| Sbjct 1818 GAGATCGTGCGCGACGCGGTGACGATCGAGCACGAGTTCGTGCGTGACTCGCTCCCTGTG 1759 Query 42966 TCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCAT 43025 ||| |||||||||| | ||||||||| |||||||| ||| ||| ||||||| | Sbjct 1758 GAGCTGATCGGCATGAATTCGGGGCTCATGTGCCAGTACATCGAGTTCGTGGCCGACCGT 1699 Query 43026 CTCCTGTGCCAGATGGGTCTCAGCCGCC--TCTACAACACGCCGTGCCCCTTCGACTTTA 43083 || |||| | | ||||| | | || |||||||| | ||| ||||||| | Sbjct 1698 CTGCTGTACTCGCTGGGTGT--GTCGAAGATCTACAACGTAAAGAACCCGTTCGACTGGA 1641 Query 43084 TGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTAC 43142 |||| | |||||| || ||||||||||||||||||||||||||||||| | ||| ||| Sbjct 1640 TGGACATGATCTCGCTGCAGGGCAAGACCAACTTTTTCGAGAAGCGCGTGGGCGAGTAC 1582 Score = 93.3 bits (102), Expect = 8e-14 Identities = 104/138 (75%), Gaps = 6/138 (4%) Strand=Plus/Minus Query 42456 AATGAGAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTC 42515 || ||||||||||||| | |||| || || |||||| ||||| ||||||||| Sbjct 2265 AACGAGAACCTGGCCATGAACTTCAGCAATGAAGTGCAGGTGCCGGAGGCCCGCTGCTTC 2206 Query 42516 TACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA-- 42573 ||||| |||||||| || || |||||| | ||||| |||||||| | ||||||| Sbjct 2205 TACGGTTTCCAGATCGCGATCGAGAACATCCACTCGGAGGTGTATTCG---CTGCTCATT 2149 Query 42574 -ACACGTACATCCTGGAT 42590 ||||||||||| |||| Sbjct 2148 GACACGTACATCAAGGAT 2131 >seq66249 Length=1340 Score = 138 bits (152), Expect = 2e-27 Identities = 180/249 (72%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| || | || ||| | ||| ||||||||||||||| | ||| |||||| || Sbjct 527 GATCCAGGAGCACGACGTGTGGCAGATGTACAAGAAGGCGGAAGCCTCGTTCTGGACGGC 468 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 ||||||| | ||||||| | ||| | ||||| | ||| | || ||||| Sbjct 467 CGAGGAGCTGGACCTGGTGCACGACCTCAAGGACTGGGCGAACCTGACGGACAACGAGCG 408 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 ||| ||| |||| || | |||||||||||||||||| |||||||| || || ||||| Sbjct 407 GTTCTTCATCAAGCACGTGCTGGCCTTCTTCGCCGCCAGCGACGGCATCGTGAACGAGAA 348 Query 42464 CCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTT 42523 |||||||| | |||| || || |||||| ||||| |||||||||||||| || Sbjct 347 CCTGGCCATGAACTTCAGCAATGAAGTGCAGGTGCCGGAGGCCCGCTGCTTCTACGGTTT 288 Query 42524 CCAGATAGC 42532 |||||| || Sbjct 287 CCAGATCGC 279 Score = 113 bits (124), Expect = 9e-20 Identities = 147/199 (74%), Gaps = 12/199 (6%) Strand=Plus/Minus Query 42618 GCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGA- 42676 ||||| || ||||| || || | |||||||| ||| ||||||||||||| ||| ||| Sbjct 193 GCCATCGATACGATCCCGTGTGTGAAGAAGAAAGCGCACTGGGCGCTCAAGTGGTGCGAC 134 Query 42677 ----GAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCA 42732 |||| || || | | ||| || | ||| | || || | ||||| ||||| | Sbjct 133 CCGCGAGTGTCGTCGTACC---CGG--AGCGTCTGCTGGCGTTCGCAGCCGTGGAGGGTA 79 Query 42733 TCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCC 42791 |||||||||||||| | ||| ||||||||||||||||||| || || || ||||| Sbjct 78 TCTTCTTCTCGGGCTCGTTCTGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTC-ATGCCT 20 Query 42792 GGACTCACCTTCTCGAACG 42810 || || | ||||||||||| Sbjct 19 GGCCTGAGCTTCTCGAACG 1 >seq110277 Length=6173 Score = 127 bits (140), Expect = 4e-24 Identities = 164/226 (73%), Gaps = 8/226 (4%) Strand=Plus/Minus Query 42921 GCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATG 42980 || ||| ||||||| | |||||| | | ||||| || ||| ||| |||| ||| Sbjct 5612 GCGGTGACGATCGAGCACGAGTTCGTGCGTGACTCGCTCCCTGTGGAGCTGATCGGTATG 5553 Query 42981 AACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGT----GCCA 43036 ||| | ||||||||| |||||||| ||| ||| ||||||| ||| |||| || | Sbjct 5552 AACTCTGCGCTCATGTGCCAGTACATCGAGTTCGTGGCCGACCGTCTGCTGTACTCGCTA 5493 Query 43037 GATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTC 43096 | || ||| || |||||||| | ||| ||||||| ||||| | ||||| Sbjct 5492 GGTGTGTCGAAGA----TCTACAACGTAAAGAACCCGTTCGACTGGATGGACATGATCTC 5437 Query 43097 GTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTAC 43142 | || ||||||||||||||||||||||||||||||| | ||| ||| Sbjct 5436 GCTGCAGGGCAAGACCAACTTTTTCGAGAAGCGCGTGGGCGAGTAC 5391 Score = 105 bits (116), Expect = 1e-17 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 42387 CTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGAC 42446 ||| | || ||||| ||| ||| |||| || | |||||||||||||||||| ||| Sbjct 6143 CTGACGGACAACGAGCGGTTCTTCATCAAGCACGTGCTGGCCTTCTTCGCCGCCAGCGAC 6084 Query 42447 GGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCG 42506 ||||| || || ||||||||||||| | |||| || || |||||| ||||| Sbjct 6083 GGCATCGTGAACGAGAACCTGGCCATGAACTTCAGCAATGAAGTGCAGGTGCCGGAGGCC 6024 Query 42507 CGCTGCTTCTACGGCTTCCAGATAGC 42532 |||||||||||||| |||||||| || Sbjct 6023 CGCTGCTTCTACGGTTTCCAGATCGC 5998 >seq72340 Length=3111 Score = 122 bits (134), Expect = 2e-22 Identities = 253/370 (68%), Gaps = 14/370 (4%) Strand=Plus/Plus Query 242935 CCGAGCTGATGAGGTTCCCGGACAGGACCACTCCGATCGGACAGATGATCAACTCGTACC 242994 ||| |||| || ||||||||| | | ||| | ||||| |||| ||| ||||||||| Sbjct 2410 CCGCGCTGCTGCACTTCCCGGACCGCAGCACGGCCATCGGCCAGAGCATCCACTCGTACC 2469 Query 242995 T-----GCTCAACAAGAGCGATCTGGACGATCACGTCGTACACCTCCTGTTCTCGGCCAA 243049 | |||| | || || || |||||| |||| | | ||||| || ||||||||||| Sbjct 2470 TCACGAGCTC--CGAG-GCCAT--GGACGACCACGCCATCCACCTGCTCTTCTCGGCCAA 2524 Query 243050 CCGATGGGAAGCCGCCTCCGACCTGAAGCGCAAGCTGATGAAGGGT-ACCACCATCGTGC 243108 ||| ||||| || ||| | | | || | || | || | ||| ||| | Sbjct 2525 CCGCTGGGAGGCSGCCAGCAAGATCGAGAGTCTRYTGGCCAGYGGMCAGCAC-ATCATCA 2583 Query 243109 TCGACCGCTACGCGTTCTCCGGCGTAGCCTTCACGGCGGCGAAGCCCGGGTTCGAGCTCG 243168 | ||||||||| ||||| |||||| |||||| | || || ||| ||| | ||||| Sbjct 2584 TGGACCGCTACTCGTTCAGCGGCGTGGCCTTCTCCGCCGCCAAGAGCGGCATGTCGCTCG 2643 Query 243169 AGTGGTG-TAAGCGAACCGACGTGGGTCTGCCCAAGCCCGACCTGGTGGTGTTCCTGGCC 243227 | ||||| | ||| | || | || ||||||||||||||| || | ||||||| | Sbjct 2644 ACTGGTGCTGGGCGC-CTGAGATCGGCCTGCCCAAGCCCGACGCCGTCATCTTCCTGGAC 2702 Query 243228 ATCGAGGCCTCCGCCGTGGAGAGCAGAGGCGGCTTCGGCGACGAGCGGTACGAGGTCAGC 243287 | || | | |||| || | | | || ||||||| | |||||||||||| || Sbjct 2703 GTGCCGGTCACGCAGGTGGCGACCCGCGCCGACTTCGGCCAGGAGCGGTACGAGACCACG 2762 Query 243288 GCCTTCCAGG 243297 |||||||||| Sbjct 2763 GCCTTCCAGG 2772 >seq107880 Length=2848 Score = 113 bits (124), Expect = 9e-20 Identities = 247/365 (68%), Gaps = 4/365 (1%) Strand=Plus/Plus Query 242935 CCGAGCTGATGAGGTTCCCGGACAGGACCACTCCGATCGGACAGATGATCAACTCGTACC 242994 ||| |||| || ||||||||| | | ||| | ||||| |||| ||| ||||||||| Sbjct 2155 CCGCGCTGTTGCACTTCCCGGACCGCAGCACGGCCATCGGGCAGAGCATCCACTCGTACC 2214 Query 242995 TGCTCAACAAGAGCGATCTGGACGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGAT 243054 | | | | | ||||||| |||| | | ||||| || |||||||||||||| | Sbjct 2215 TCACGAGCTCGGAGGCCATGGACGACCACGCCATCCACCTGCTCTTCTCGGCCAACCGCT 2274 Query 243055 GGGAAGCCGCCTCCGACCTGAAGCGCAAGCTGATGAAGGGT-ACCACCATCGTGCTCGAC 243113 |||| || ||| | | | || | || | || | ||| ||| | | ||| Sbjct 2275 GGGAGGCGGCCAGCAAGATCGAGAGTCTATTGGCCAGCGGCCAGCAC-ATCATCATGGAC 2333 Query 243114 CGCTACGCGTTCTCCGGCGTAGCCTTCACGGCGGCGAAGCCCGGGTTCGAGCTCGAGTGG 243173 |||||| ||||| |||||| |||||| | || || ||| ||| | |||||| ||| Sbjct 2334 CGCTACTCGTTCAGCGGCGTGGCCTTCTCCGCCGCCAAGAGCGGCATGTCGCTCGACTGG 2393 Query 243174 TG-TAAGCGAACCGACGTGGGTCTGCCCAAGCCCGACCTGGTGGTGTTCCTGGCCATCGA 243232 || | ||| | || | || ||||||||||||||| || | ||||||| | | Sbjct 2394 TGCTGGGCGC-CTGAGATCGGCCTGCCCAAGCCCGACGCCGTCATCTTCCTGGACGTGCC 2452 Query 243233 GGCCTCCGCCGTGGAGAGCAGAGGCGGCTTCGGCGACGAGCGGTACGAGGTCAGCGCCTT 243292 || | | |||| || | | | || ||||||| | |||||||||||| || ||||| Sbjct 2453 GGTCACGCAGGTGGCGACCCGCGCCGACTTCGGCCAGGAGCGGTACGAGACCACGGCCTT 2512 Query 243293 CCAGG 243297 ||||| Sbjct 2513 CCAGG 2517 >seq64259 Length=514 Score = 87.8 bits (96), Expect = 3e-12 Identities = 151/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 244741 GCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGC 244800 ||| | ||| ||| | ||| ||||| |||| ||| || || |||||| |||| || Sbjct 506 GCATAAGTTGCTGGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGGCCGC 447 Query 244801 GTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCA 244860 ||||||||| | ||| |||||| | || ||||||| ||||||| | | | | ||| Sbjct 446 GTCCTTGTACAACATAAAGGGCACTCCCGTCTCGATCTGGGCGTCCAATATGGCNAACCA 387 Query 244861 GAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAG 244920 || | | || |||| |||| |||| || ||||| | |||||| || || Sbjct 386 CAGCTGCTGGGCGTTGATCGTCTTGCGGGCGCGTCCCTCCGTCTCGTACTTTTCATAGAG 327 Query 244921 GGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGG 244960 ||||||||| ||| ||||||| ||| | || || ||| Sbjct 326 GGCCTCGAATTCGTCGCCCCAGCACTCATAGAGTCCAGGG 287 >seq43628 Length=6243 Score = 84.2 bits (92), Expect = 4e-11 Identities = 133/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 243111 GACCGCTACGCGTTCTCCGGCGTAGCCTTCACGGCGGCGAAGCCCGGGTTCGAGCTCGAG 243170 ||||||||| ||||| |||||| |||||| | || || ||| ||| | |||||| Sbjct 16 GACCGCTACTCGTTCAGCGGCGTGGCCTTCTCCGCCGCCAAGAGCGGCATGTCGCTCGAC 75 Query 243171 TGGTG-TAAGCGAACCGACGTGGGTCTGCCCAAGCCCGACCTGGTGGTGTTCCTGGCCAT 243229 ||||| | ||| | || | || ||||||||||||||| || | ||||||| | | Sbjct 76 TGGTGCTGGGCGC-CTGAGATCGGCCTGCCCAAGCCCGACGCCGTCATCTTCCTGGACGT 134 Query 243230 CGAGGCCTCCGCCGTGGAGAGCAGAGGCGGCTTCGGCGACGAGCGGTACGAGGTCAGCGC 243289 || | | |||| || | | | || ||||||| | |||||||||||| || || Sbjct 135 GCCGGTCACGCAGGTGGCGACCCGCGCCGACTTCGGCCAGGAGCGGTACGAGACCACGGC 194 Query 243290 CTTCCAGG 243297 |||||||| Sbjct 195 CTTCCAGG 202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 942940704470240