Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20x_20alni_20[genbank_20GCA_5F000439335.1_202013-07-23] 118,474 sequences; 235,999,877 total letters Query= NC_022087.1 Length=53253 Score E Sequences producing significant alignments: (Bits) Value seq73541 82.4 3e-11 >seq73541 Length=9300 Score = 82.4 bits (90), Expect = 3e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 36628 CACTCGCTCGACGGTCTCGGGCCAGGTCTCCTTGGTGCCGTCTGGCTTGGTGCGGGCGTA 36687 ||| ||||| ||||||||| |||| ||||||||||||||| | |||| ||| | ||| Sbjct 5941 CACGCGCTCCACGGTCTCGAACCAGCGCTCCTTGGTGCCGTCGGCCTTGACGCGCGAGTA 5882 Query 36688 GGTTCGCTTGTACACAAGCTCTCCC 36712 || ||| ||||||| ||||||||| Sbjct 5881 CGTGCGCATGTACACGAGCTCTCCC 5857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170048425431420