Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pilasporangium_20apinafurcum_20[genbank_20GCA_5F001600475.1_202016- 03-01] 310 sequences; 37,582,498 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq18 98.7 2e-15 >seq18 Length=519368 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 318991 TCTTTGTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGA 319050 || ||||||||||| || ||||||| ||||| ||||| || | || || || | Sbjct 346987 TCCTTGTCTTCACCAGACTGGAAACGCCACTGGATGTACTGATTAGCAGTGATATCCAAG 346928 Query 319051 TGATCCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGC 319110 || || || ||||| ||||| || ||||| |||||||| |||| |||||| || ||| Sbjct 346927 TGCTCTTCAATGTGATGGAAGGCGTGCTGCGCCACGTACGCAAAACGCATGGCAGGGTGC 346868 Query 319111 TTCCAAACACTACCGATGGTGGCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTGCTT 319170 ||||| || ||||| || | ||| | || || || | || ||| ||||| || Sbjct 346867 TTCCACACGGTACCGGACGTTGGTTCGACTTCACCAGTCAACATCTTGATGAGCGTCGAC 346808 Query 319171 TTCCCCGCACCGTTTTCGCCCACCACACCGAT 319202 || || |||||||| || | |||| |||| Sbjct 346807 TTGCCAGCACCGTTGGGCCCAAGCACAGCGAT 346776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057819798455300