Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pilasporangium_20apinafurcum_20[genbank_20GCA_5F001600475.1_202016- 03-01] 310 sequences; 37,582,498 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq17 178 2e-39 >seq17 Length=533465 Score = 178 bits (196), Expect = 2e-39 Identities = 293/420 (70%), Gaps = 2/420 (0%) Strand=Plus/Plus Query 145675 TGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATG 145734 |||| ||| || ||||||||||||| | ||||| || ||||| || | |||||||||| Sbjct 296625 TGGATCTTGAGCGGCTCCACGTGGTCCAAGTAGATATGTGCGTCACCAATGACGTGGATG 296684 Query 145735 AAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTG 145794 || || || | || || ||||||| || |||| || || |||| || ||||||| Sbjct 296685 AAATCACCAGCCTTCAGTCCCGTGACCTGTGCGATCAACCGTGTGAGCAAGGCGTAGCTG 296744 Query 145795 GCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAG 145854 || || ||||| || || |||||||||||||| ||||||||||||||| ||||||| Sbjct 296745 GCGATATTGAATGGGACGCCCAGCCCCATGTCTGCCGAGCGCTGGTACATCTGGCAGCTA 296804 Query 145855 AGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCG 145914 || || || || || ||||| || || | | |||||| || || || ||||| | Sbjct 296805 AGTTCACCATTAGCGACATAGAATTGACAAAACATGTGGCATGGAGGGAGTGCCATCTCC 296864 Query 145915 GGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTG 145974 || ||||| || |||||||| | | || || | | | | || || | ||| Sbjct 296865 TTCAAATCCGCTGGATTCCAGGCTGACATGATGATGCGACGGTCGTTCGGATTTGTTTTG 296924 Query 145975 ATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA- 146033 | || |||| ||| |||||| || || ||||| || |||||| | | || | Sbjct 296925 AGCTTGTGAATCACGTCGGCGAGCTGATCGACACCCTGGCCAGTGTAATC-GGCGTGCAT 296983 Query 146034 GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC 146093 | |||| ||| ||||| || | |||||| ||||| || ||||| || ||||| || Sbjct 296984 ATTGGTGTACTTGGCGCCGAAATGTCGCCACTGAAACCCATATACGGGTCCAAGGTCACC 297043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590074513452400