Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pilasporangium_20apinafurcum_20[genbank_20GCA_5F001600475.1_202016- 03-01] 310 sequences; 37,582,498 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq31 98.7 1e-15 >seq31 Length=344941 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || |||||||| || || | ||||| | || | ||| | | Sbjct 305722 ATGCAGATCTTTGTGAAGACATTAACGGGGAAGACTATCACATTGGACGTCGAACCGTCC 305663 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||| | ||||| | ||||||||||||||| ||||| ||||| || ||||| ||||| Sbjct 305662 GACTCGATCGATAATGTCAAACAAAAGATTCAAGACAAGGAAGGCATCCCTCCAGATCAG 305603 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||| | | || || || || || |||| | | | | |||||||| ||| Sbjct 305602 CAACGTCTCATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGCACGTTGAGCGACTACAAC 305543 Query 26949 ATTCAAAAAGAATCTAC 26965 ||||| || || || || Sbjct 305542 ATTCAGAAGGAGTCGAC 305526 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || |||||||| || || | ||||| | || | ||| | | Sbjct 323605 ATGCAGATCTTTGTGAAGACATTAACGGGGAAGACTATCACATTGGACGTCGAACCGTCC 323664 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||| | ||||| | ||||||||||||||| ||||| ||||| || ||||| ||||| Sbjct 323665 GACTCGATCGATAATGTCAAACAAAAGATTCAAGACAAGGAAGGCATCCCTCCAGATCAG 323724 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||| | | || || || || || |||| | | | | |||||||| ||| Sbjct 323725 CAACGTCTCATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGCACGTTGAGCGACTACAAC 323784 Query 26949 ATTCAAAAAGAATCTAC 26965 ||||| || || || || Sbjct 323785 ATTCAGAAGGAGTCGAC 323801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478660545183200