Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pilasporangium_20apinafurcum_20[genbank_20GCA_5F001600475.1_202016- 03-01] 310 sequences; 37,582,498 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq31 95.1 1e-14 >seq31 Length=344941 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || |||||||| || || | || || | || ||||| | | Sbjct 305722 ATGCAGATCTTTGTGAAGACATTAACGGGGAAGACTATCACATTGGACGTCGAACCGTCC 305663 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||| | ||||| | ||||||||||||||| ||||| |||||||| ||||| ||||| Sbjct 305662 GACTCGATCGATAATGTCAAACAAAAGATTCAAGACAAGGAAGGCATCCCTCCAGATCAG 305603 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | || ||||| || || |||| | | | ||||| || ||| Sbjct 305602 CAACGTCTCATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGCACGTTGAGCGACTACAAC 305543 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 ||||| || || || ||| | || || || || Sbjct 305542 ATTCAGAAGGAGTCGACATTGCACTTGGTATT 305511 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || |||||||| || || | || || | || ||||| | | Sbjct 323605 ATGCAGATCTTTGTGAAGACATTAACGGGGAAGACTATCACATTGGACGTCGAACCGTCC 323664 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||| | ||||| | ||||||||||||||| ||||| |||||||| ||||| ||||| Sbjct 323665 GACTCGATCGATAATGTCAAACAAAAGATTCAAGACAAGGAAGGCATCCCTCCAGATCAG 323724 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | || ||||| || || |||| | | | ||||| || ||| Sbjct 323725 CAACGTCTCATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGCACGTTGAGCGACTACAAC 323784 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 ||||| || || || ||| | || || || || Sbjct 323785 ATTCAGAAGGAGTCGACATTGCACTTGGTATT 323816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429934375648050