Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pilasporangium_20apinafurcum_20[genbank_20GCA_5F001600475.1_202016- 03-01] 310 sequences; 37,582,498 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq31 114 1e-20 >seq31 Length=344941 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || ||||| || ||||||||||| ||||| ||||| | || | ||| ||||| || Sbjct 305292 TGGAGCGTCGACTCCTTTTGGATGTTATAGTCGCTCAACGTGCGACCATCTTCCAACTGC 305351 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 ||||| ||| | ||||| || || || || || ||||| ||||| |||||||| |||||| Sbjct 305352 TTTCCAGCGAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCCTTATCTTGGATTTTT 305411 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 || || | || | | ||| || | ||| || || | ||||| |||||| || || Sbjct 305412 TGCTTCACATTGTCAATAGAGTCCGAGGGCTCCACATCCAAAGTAATCGTTTTCCCCGTC 305471 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 | || || ||||| || ||||| Sbjct 305472 AACGTCTTCACAAAGATCTGCAT 305494 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || ||||| || ||||||||||| ||||| ||||| | || | ||| ||||| || Sbjct 324035 TGGAGCGTCGACTCCTTTTGGATGTTATAGTCGCTCAACGTGCGACCATCTTCCAACTGC 323976 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 ||||| ||| | ||||| || || || || || ||||| ||||| |||||||| |||||| Sbjct 323975 TTTCCAGCGAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCCTTATCTTGGATTTTT 323916 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 || || | || | | ||| || | ||| || || | ||||| |||||| || || Sbjct 323915 TGCTTCACATTGTCAATAGAGTCCGAGGGCTCCACATCCAAAGTAATCGTTTTCCCCGTC 323856 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 | || || ||||| || ||||| Sbjct 323855 AACGTCTTCACAAAGATCTGCAT 323833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452001448487600