Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pilasporangium_20apinafurcum_20[genbank_20GCA_5F001600475.1_202016- 03-01] 310 sequences; 37,582,498 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1 136 5e-27 >seq1 Length=1523961 Score = 136 bits (150), Expect = 5e-27 Identities = 267/395 (68%), Gaps = 0/395 (0%) Strand=Plus/Minus Query 154713 AATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCA 154772 ||||| |||||||| || | || || ||||| || || ||||| |||||||||||||| Sbjct 1386905 AATGTGTGTTTGATCCCTGTATCTGCCCATGGTACCAACCCTGCCAGTGCTGTCATGGCT 1386846 Query 154773 GGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTA 154832 || ||||||||||| | || || | |||||| |||||||| | ||| ||| | Sbjct 1386845 GGCATGAAAGTTGTGGTCGTAAAATCTGATGAGAATGGTAACGTGGACCGTGTCGATTTG 1386786 Query 154833 GAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACCCATCT 154892 || | || | | | | | | |||||| ||||||||||||||||||| Sbjct 1386785 GAAGAAAAGGTCAAGAAGCACGCCAACGAACTGAGTGCGTTTATGATTACATACCCATCG 1386726 Query 154893 ACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACAATGGT 154952 || |||||| |||||| ||| | | || ||| || || | ||| | | || Sbjct 1386725 ACGTTTGGTGTGTTTGAAGAAGGCATCAAGGACATGTGTGAGCTCATCCATTCCCACGGC 1386666 Query 154953 GGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGT 155012 || || || || | || || || || | ||||| || |||||| | || || || Sbjct 1386665 GGGCAAGTGTACATGGACGGTGCCAACATGAATGCCCAAGTAGGATTGTGCAACCCTGGT 1386606 Query 155013 GAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGA 155072 | ||| || ||||| || ||| | || ||||| || || ||||| || || || || Sbjct 1386605 AACATTGGCGCGGATGTGTGCCATTTGAATTTACACAAGACTTTCTGCATCCCGCACGGT 1386546 Query 155073 GGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGC 155107 ||||| ||||| || || || |||| ||||| || Sbjct 1386545 GGTGGTGGTCCGGGTGTGGGCTCTATCGGTGTGGC 1386511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579210555550400