Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pilasporangium_20apinafurcum_20[genbank_20GCA_5F001600475.1_202016- 03-01] 310 sequences; 37,582,498 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1 141 1e-28 >seq1 Length=1523961 Score = 141 bits (156), Expect = 1e-28 Identities = 274/399 (69%), Gaps = 8/399 (2%) Strand=Plus/Plus Query 138180 GCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTA 138239 || ||||| |||| || || || ||||| ||||| || || || || ||||| ||||| Sbjct 1386511 GCCACACCGATAGAGCCCACACCCGGACCACCACCACCGTGCGGGATGCAGAAAGTCTTG 1386570 Query 138240 TGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGT 138299 |||||||| | ||| || ||||| || ||| || || || || | ||||| || Sbjct 1386571 TGTAAATTCAAATGGCACACATCCGCGCCAATGTTACCAGGGTTGCACAATCCTACTTGG 1386630 Query 138300 GCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACAT 138359 ||||| | || ||||| || | || || || || || | | ||| | || || ||| Sbjct 1386631 GCATTCATGTTGGCACCGTCCATGTACACTTGCCCGCCGTGGGAATGGATGAGCTCACAC 1386690 Query 138360 ATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCAT-AATACA 138418 || | ||||| | |||||| |||||| |||||||| ||||||||||| || || Sbjct 1386691 ATGTCCTTGATGCCTTCTTCAAACACACCAAACGTCGATGGGTATGTAATCATAAACGCA 1386750 Query 138419 -TGAG--AGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTT 138475 | || ||| || ||| ||| | || | || | ||| ||| | ||| Sbjct 1386751 CTCAGTTCGTTGGCGTG-CTTCTTGA---CCTTTTCTTCCAAATCGACACGGTCCACGTT 1386806 Query 138476 GCCATCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGG 138535 |||| |||||| | || || | ||||||||||| || |||||||| ||||| ||||| Sbjct 1386807 ACCATTCTCATCAGATTTTACGACCACAACTTTCATGCCAGCCATGACAGCACTGGCAGG 1386866 Query 138536 ATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATT 138574 || || ||||| || || | || |||| ||| ||||| Sbjct 1386867 GTTGGTACCATGGGCAGATACAGGGATCAAACACACATT 1386905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578996156381200