Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pilasporangium_20apinafurcum_20[genbank_20GCA_5F001600475.1_202016- 03-01] 310 sequences; 37,582,498 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq46 113 5e-20 >seq46 Length=277093 Score = 113 bits (124), Expect = 5e-20 Identities = 147/202 (73%), Gaps = 1/202 (0%) Strand=Plus/Minus Query 146378 AAGGTGGCGCAATTAAGTGGGTGTGTGGCAGAGCAGACCGATTACAAGCACGGGGAGCAA 146437 ||||| || ||||| ||| | ||| | || || | | ||| | ||||| |||||| Sbjct 163153 AAGGTAGCTCAATTGGCTGGCTACGTGTCGGAACACTCTGCTTATCATCACGGTGAGCAA 163094 Query 146438 AACTTGTGCGAGACCATCATTAAGTTCGCGCAGGATTTTGTGGGCAGCAATAATATCCCC 146497 | |||| || ||| || || || | ||||| |||||||| |||||||| ||||| | Sbjct 163093 AGCTTGAACGGGACAATTATCAACATGGCGCAAGATTTTGTCGGCAGCAACAATATTCAT 163034 Query 146498 CTTCTCTA-CCAGATGGGCAATTCGGAACAAGGTTGGAAGGAGGGAAGGACGCTGCAAGT 146556 ||||||| ||| | || |||||||| || || ||| || || || |||||||||||| Sbjct 163033 CTTCTCTCTCCAAACGGCCAATTCGGTACCAGATTGATGGGTGGAAAAGACGCTGCAAGT 162974 Query 146557 CCCAGATATATTTTCACCAAAC 146578 || | || || ||||| |||| Sbjct 162973 CCTCGTTACATCTTCACAAAAC 162952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521543579010800