Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pilasporangium_20apinafurcum_20[genbank_20GCA_5F001600475.1_202016- 03-01] 310 sequences; 37,582,498 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq17 127 2e-24 >seq17 Length=533465 Score = 127 bits (140), Expect = 2e-24 Identities = 208/300 (69%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 146877 GAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTT 146936 |||| | ||||| || || || | | ||| || || || || ||||||||||||| Sbjct 296591 GAGCGTTGGGAACGGACGTGGCGTGCGTCCCAATTGGATCTTGAGCGGCTCCACGTGGTC 296650 Query 146937 GAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCAC 146996 | ||||| || ||||| || | | ||| | || || || | ||| || || || || Sbjct 296651 CAAGTAGATATGTGCGTCACCAATGACGTGGATGAAATCACCAGCCTTCAGTCCCGTGAC 296710 Query 146997 GTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCC 147056 || || | || ||||||| | ||||||||| || ||||| ||||| ||||| || Sbjct 296711 CTGTGCGATCAACCGTGTGAGCAAGGCGTAGCTGGCGATATTGAATGGGACGCCCAGCCC 296770 Query 147057 CATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTG 147116 |||||| |||| | |||||||| |||||| || || || | || || || || || Sbjct 296771 CATGTCTGCCGAGCGCTGGTACATCTGGCAGCTAAGTTCACCATTAGCGACATAGAATTG 296830 Query 147117 GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGA 147176 || | |||||||| || || || ||||| | || ||||| || |||||||| || Sbjct 296831 ACAAAACATGTGGCATGGAGGGAGTGCCATCTCCTTCAAATCCGCTGGATTCCAGGCTGA 296890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583485738984000