Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pilasporangium_20apinafurcum_20[genbank_20GCA_5F001600495.1_202016- 03-01] 280 sequences; 37,444,745 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq20 104 5e-17 >seq20 Length=529036 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 318991 TCTTTGTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGA 319050 || ||||||||||| || ||||||| ||||| ||||| || | || || || | | Sbjct 186504 TCCTTGTCTTCACCAGACTGGAAACGCCACTGGATGTACTGATTAGCAGTGATATCCAAA 186563 Query 319051 TGATCCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGC 319110 || || || ||||| ||||| || ||||| |||||||| |||| |||||| || ||| Sbjct 186564 TGCTCTTCAATGTGATGGAAGGCGTGCTGCGCCACGTACGCAAAACGCATGGCAGGGTGC 186623 Query 319111 TTCCAAACACTACCGATGGTGGCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTGCTT 319170 ||||| || ||||| || | ||| | || || || | || ||| ||||| || Sbjct 186624 TTCCACACGGTACCGGACGTTGGTTCGACTTCACCAGTCAACATCTTGATGAGCGTCGAC 186683 Query 319171 TTCCCCGCACCGTTTTCGCCCACCACACCGAT 319202 || || |||||||| || | |||| |||| Sbjct 186684 TTACCAGCACCGTTGGGCCCAAGCACAGCGAT 186715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057820205056400