Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pilasporangium_20apinafurcum_20[genbank_20GCA_5F001600495.1_202016- 03-01] 280 sequences; 37,444,745 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq58 174 2e-38 >seq58 Length=246340 Score = 174 bits (192), Expect = 2e-38 Identities = 292/420 (70%), Gaps = 2/420 (0%) Strand=Plus/Plus Query 145675 TGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATG 145734 |||| ||| || ||||||||||||| | ||||| || ||||| || | |||||||||| Sbjct 5804 TGGATCTTGAGCGGCTCCACGTGGTCCAAGTAGATATGTGCGTCACCAATGACGTGGATG 5863 Query 145735 AAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTG 145794 || || || | || || ||||||| || |||| | || |||| || ||||||| Sbjct 5864 AAATCACCAGCCTTCAGTCCCGTGACCTGTGCGATCGACCGTGTGAGCAAGGCGTAGCTG 5923 Query 145795 GCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAG 145854 || || ||||| || || |||||||||||||| ||||||||||||||| ||||||| Sbjct 5924 GCGATATTGAATGGGACGCCCAGCCCCATGTCTGCCGAGCGCTGGTACATCTGGCAGCTA 5983 Query 145855 AGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCG 145914 || || || || || ||||| || || | | |||||| || || || ||||| | Sbjct 5984 AGTTCACCATTAGCGACATAGAATTGACAAAACATGTGGCATGGAGGGAGTGCCATCTCC 6043 Query 145915 GGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTG 145974 || ||||| || |||||||| | | || || | | | | || || | ||| Sbjct 6044 TTCAAATCCGCTGGATTCCAGGCTGACATGATGATGCGACGGTCGTTCGGATTTGTTTTG 6103 Query 145975 ATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA- 146033 | || |||| ||| |||||| || || ||||| || |||||| | | || | Sbjct 6104 AGCTTGTGAATCACGTCGGCGAGCTGATCGACACCCTGGCCAGTGTAATC-GGCGTGCAT 6162 Query 146034 GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC 146093 | |||| ||| ||||| || | |||||| ||||| || ||||| || ||||| || Sbjct 6163 ATTGGTGTACTTGGCGCCGAAATGTCGCCACTGAAACCCATATACGGGTCCAAGGTCACC 6222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590074734731200