Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pilasporangium_20apinafurcum_20[genbank_20GCA_5F001600495.1_202016- 03-01] 280 sequences; 37,444,745 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 1e-12 >seq2 Length=1145976 Score = 87.8 bits (96), Expect = 1e-12 Identities = 114/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 22747 TTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATT-TGCGGCCATATTCTG 22805 ||||| ||||||||||| || || || | ||||| || || || ||| |||| ||||| Sbjct 132144 TTGGCATTTGCGGCTGTCGAGGGAATCTTCTTTTCGGGTTCCTTCTGC-TCCATCTTCTG 132202 Query 22806 GCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGA 22865 | ||||||| ||| ||||||||| || | || || || || | || || ||||| Sbjct 132203 GTTGAAGAAGCGTGGGCTCATGCCTGGTCTCAGTTTCTCGAATGAACTCATCAGTCGTGA 132262 Query 22866 CGAAGGTCTACACTGTGACTTTGCTTGTATGCTGT 22900 ||||| | |||||||||||||| || || ||| Sbjct 132263 TGAAGGGTTGCACTGTGACTTTGCGTGCTTGATGT 132297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356232384352840