Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pilasporangium_20apinafurcum_20[genbank_20GCA_5F001600495.1_202016- 03-01] 280 sequences; 37,444,745 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq2 132 6e-26 >seq2 Length=1145976 Score = 132 bits (146), Expect = 6e-26 Identities = 267/396 (67%), Gaps = 0/396 (0%) Strand=Plus/Minus Query 154713 AATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCA 154772 ||||| |||||||| || | || || ||||| || || ||||| |||||||||||||| Sbjct 1033026 AATGTGTGTTTGATCCCTGTATCTGCGCATGGTACCAACCCTGCCAGTGCTGTCATGGCT 1032967 Query 154773 GGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTA 154832 || ||||||||||| | || || | |||||| ||||||| | ||| ||| | Sbjct 1032966 GGCATGAAAGTTGTGGTCGTAAAATCTGATGAGAATGGTAATGTGGACCGTGTCGATTTG 1032907 Query 154833 GAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACCCATCT 154892 || | || | | | | | | |||||| ||||||||||||||||||| Sbjct 1032906 GAAGAAAAGGTCAAGAAGCACGCCAACGAACTGAGTGCGTTTATGATTACATACCCATCG 1032847 Query 154893 ACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACAATGGT 154952 || |||||| |||||| ||| | | || ||| || || | ||| | | || Sbjct 1032846 ACGTTTGGTGTGTTTGAAGAAGGCATCAAGGACATGTGTGAGCTCATCCATTCCCACGGC 1032787 Query 154953 GGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGT 155012 || || || || | || || || || | ||||| || |||||| | || || || Sbjct 1032786 GGGCAAGTGTACATGGACGGTGCCAACATGAATGCCCAAGTAGGATTGTGCAACCCTGGT 1032727 Query 155013 GAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGA 155072 | ||| || ||||| || || | || ||||| || || ||||| || || || || Sbjct 1032726 AACATTGGCGCGGATGTGTGCCACTTGAATTTACACAAGACTTTCTGCATCCCGCACGGT 1032667 Query 155073 GGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCA 155108 ||||| ||||| || || ||| |||| ||||| ||| Sbjct 1032666 GGTGGTGGTCCGGGTGTGGGTTCTATTGGTGTGGCA 1032631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579210772755200