Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pilasporangium_20apinafurcum_20[genbank_20GCA_5F001600495.1_202016- 03-01] 280 sequences; 37,444,745 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq58 122 1e-22 >seq58 Length=246340 Score = 122 bits (134), Expect = 1e-22 Identities = 207/300 (69%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 146877 GAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTT 146936 |||| | ||||| || || || | | ||| || || || || ||||||||||||| Sbjct 5770 GAGCGTTGGGAACGGACGTGGCGTGCGTCCCAATTGGATCTTGAGCGGCTCCACGTGGTC 5829 Query 146937 GAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCAC 146996 | ||||| || ||||| || | | ||| | || || || | ||| || || || || Sbjct 5830 CAAGTAGATATGTGCGTCACCAATGACGTGGATGAAATCACCAGCCTTCAGTCCCGTGAC 5889 Query 146997 GTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCC 147056 || || | | ||||||| | ||||||||| || ||||| ||||| ||||| || Sbjct 5890 CTGTGCGATCGACCGTGTGAGCAAGGCGTAGCTGGCGATATTGAATGGGACGCCCAGCCC 5949 Query 147057 CATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTG 147116 |||||| |||| | |||||||| |||||| || || || | || || || || || Sbjct 5950 CATGTCTGCCGAGCGCTGGTACATCTGGCAGCTAAGTTCACCATTAGCGACATAGAATTG 6009 Query 147117 GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGA 147176 || | |||||||| || || || ||||| | || ||||| || |||||||| || Sbjct 6010 ACAAAACATGTGGCATGGAGGGAGTGCCATCTCCTTCAAATCCGCTGGATTCCAGGCTGA 6069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583485957792000