Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pilasporangium_20apinafurcum_20[genbank_20GCA_5F001600495.1_202016- 03-01] 280 sequences; 37,444,745 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 2e-11 >seq2 Length=1145976 Score = 86.0 bits (94), Expect = 2e-11 Identities = 128/180 (71%), Gaps = 4/180 (2%) Strand=Plus/Plus Query 443718 GCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTT 443777 || ||||| | ||||| ||| | || ||| || ||| || |||||||||||||| Sbjct 132147 GCATTTGCGGCTGTCGAGGGAATCTTCTTTTCGGGTTCCTTCTGC-TCCATCTTCTGGTT 132205 Query 443778 GAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGA 443837 ||| |||||||| || |||| ||||| | || || ||||| |||||||| || || Sbjct 132206 GAAGAAGCGTGGGCTCATGCCTGGTCTCAGTTTCTCGAATGAACTCATCAGTCGTGATGA 132265 Query 443838 GGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCAAACACATCGTGCACAAGCTGCC 443897 || ||||| || ||||| || || | | ||| |||| | |||| ||||||| || Sbjct 132266 AGGGTTGCACTGTGACTTTGCGTGCTTGATGTACTCCAAGC---TCGTCAACAAGCTTCC 132322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588330301844600