Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= AC_000008.1 Length=35938 Score E Sequences producing significant alignments: (Bits) Value seq306 345 1e-90 >seq306 Length=326 Score = 345 bits (382), Expect = 1e-90 Identities = 200/206 (97%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 14981 GATGATCTGGAGGGTGGTAACATTCCCGCACTGTTGGATGTGGACGCCTACCAGGCGAGC 15040 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1 GATGACCTGGAGGGTGGTAACATTCCCGCACTGTTGGATGTGGACGCCTACCAGGCAAGC 60 Query 15041 TTGAAAGATGACACCGAACAGGGCGGGGGTGGCGCAGGCGGCAGCAACAGCAGTGGCAGC 15100 || ||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||| Sbjct 61 TTAAAAGATGACACCGAACAGGGCGGGGATGGCGCAGGCGGCGGCAACAACAGTGGCAGC 120 Query 15101 GGCGCGGAAGAGAACTCCAACGCGGCAGCCGCGGCAATGCAGCCGGTGGAGGACATGAAC 15160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GGCGCGGAAGAGAACTCCAACGCGGCAGCCGCGGCAATGCAGCCGGTGGAGGACATGAAC 180 Query 15161 GATCATGCCATTCGCGGCGACACCTT 15186 |||||||||||||||||||||||||| Sbjct 181 GATCATGCCATTCGCGGCGACACCTT 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114875686399600