Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= AC_000017.1 Length=36001 Score E Sequences producing significant alignments: (Bits) Value seq306 365 1e-96 >seq306 Length=326 Score = 365 bits (404), Expect = 1e-96 Identities = 228/245 (93%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 14991 GATGACCTGGAGGGTGGTAACATTCCCGCACTGTTGGATGTGGACGCCTACCAGGCAAGC 15050 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GATGACCTGGAGGGTGGTAACATTCCCGCACTGTTGGATGTGGACGCCTACCAGGCAAGC 60 Query 15051 TTGAAAGATGACACCGAACAGGGCGGGGGTGGCGCAGGCGGCGGCAACAACAGTGGCAGC 15110 || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 61 TTAAAAGATGACACCGAACAGGGCGGGGATGGCGCAGGCGGCGGCAACAACAGTGGCAGC 120 Query 15111 GGCGCGGAAGAGAACTCCAACGCGGCAGCCGCGGCAATGCAGCCGGTGGAGGACATGAAC 15170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GGCGCGGAAGAGAACTCCAACGCGGCAGCCGCGGCAATGCAGCCGGTGGAGGACATGAAC 180 Query 15171 GATCATGCCATTCGCGGCGACACCTTTGCCACACGGGCGGAGGAGAAGCGCGCTGAGGCC 15230 |||||||||||||||||||||||||| | | | | ||||||||||||||| Sbjct 181 GATCATGCCATTCGCGGCGACACCTTAAGCTTATTTAAATAATATAAGCGCGCTGAGGCC 240 Query 15231 GAGGC 15235 ||||| Sbjct 241 GAGGC 245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 115077278829772