Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq112 134 2e-26 >seq112 Length=380982 Score = 134 bits (148), Expect = 2e-26 Identities = 187/262 (71%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 145684 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCG 145743 || ||||| ||||| || || |||| ||||| || || | ||||||||| || || || Sbjct 85221 AGTGGCTCGACGTGATTTAGATAGATATGCGCATCGCCAATGACGTGGATAAATTCACCA 85280 Query 145744 GGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTG 145803 || || | || || | || || || | |||||||| | ||||||||| || || Sbjct 85281 GGTTCTAATCCAGTCACTTGAGCAACAAGACGCGTCAGCAGCGCGTAGCTGGCAATATTA 85340 Query 145804 AAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCG 145863 || ||||| || ||||||||||| ||||||| ||||||| ||| || || ||||| || Sbjct 85341 AATGGCACGCCAAGCCCCATGTCGGCCGAGCGTTGGTACATCTGACATGACAGCTCTCCA 85400 Query 145864 CCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCC 145923 || || || || ||||| | | |||||| || || | ||||| || ||||| Sbjct 85401 TTTGCTACATAAAATTGGCAAAACATGTGGCAAGGTGGTAATGCCATTTCGTTGAGGTCT 85460 Query 145924 GCCGGGTTCCAGGCGGTGAGGA 145945 || |||||||| || | |||| Sbjct 85461 GCAGGGTTCCACGCCGACAGGA 85482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590053477214480