Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq524 114 2e-20 >seq524 Length=1474960 Score = 114 bits (126), Expect = 2e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 10431 CCTAAAGGATGTTATGCAAGATTAGCTCCCAGATCTGATTTAGCTCTAAATAAATTTATT 10490 ||| |||||||||||||| | | || || | || | | | ||| | || || |||||| Sbjct 1199202 CCTGAAGGATGTTATGCACGTGTGGCGCCACGCTCGGGTCTTGCTTTGAAGAATTTTATT 1199261 Query 10491 GATATTGGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTAATATTATTT 10550 |||| || |||||||| ||||||| |||||| | || ||||| || || || ||||| Sbjct 1199262 GATACAGGTGCTGGAGTTATTGACGCCGATTATCGTGGCAATGTTGGTGTGATTCTATTT 1199321 Query 10551 AATCATTCTAATGAAGATTTTATAATAAATAGAGGAGATAGAATATCTCAATTAATATGT 10610 || || || || ||||||||||| | || | |||||| | | | ||| | || | Sbjct 1199322 AACCACTCGAACGAAGATTTTATTGTTAAGCGCGGAGATCGCGTGGCACAACTCATTCTT 1199381 Query 10611 GAAAAAATTTTATATCCTAAA 10631 ||||||||| ||||||| || Sbjct 1199382 GAAAAAATTGAATATCCTGAA 1199402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743497012119040