Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq3042 86.0 1e-11 >seq3042 Length=3267112 Score = 86.0 bits (94), Expect = 1e-11 Identities = 109/145 (75%), Gaps = 4/145 (3%) Strand=Plus/Minus Query 157258 GTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCAT 157317 ||||||| | || | || ||||||||||| ||||| || || ||||||||||||||||| Sbjct 2154392 GTACTCGCCAACACGCTTTTCAAAAAAGTTCGTCTTACCTTGAAGAGAAATCATGTCCAT 2154333 Query 157318 CCACTCGAATGGGTTGGCGCA-GTTGTACACCTTGTCGTAC-CCCAGCTGGTTCAGCCAG 157375 ||| ||||| ||||| | || ||||| | |||| ||| || ||| || ||| | Sbjct 2154332 CCAATCGAACGGGTT-CCTCACATTGTAGATCTTG-GATACACCAAGCGAGTAGAGCAAA 2154275 Query 157376 TAGTCCGCCACAAACTTGATGTACT 157400 ||| |||||||| | ||||||| Sbjct 2154274 CGGTCAGCCACAAATTCTATGTACT 2154250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073722898367616