Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq112 114 1e-20 >seq112 Length=380982 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 20994 CCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACC 21053 || || || ||||| | ||| |||||| || ||||||||||| || ||||| || || Sbjct 85290 CCAGTCACTTGAGCAACAAGACGCGTCAGCAGCGCGTAGCTGGCAATATTAAATGGCACG 85349 Query 21054 CCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACG 21113 || || ||||||||||| || | ||||||| ||| || |||||||| || || || Sbjct 85350 CCAAGCCCCATGTCGGCCGAGCGTTGGTACATCTGACATGACAGCTCTCCATTTGCTACA 85409 Query 21114 TAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTC 21173 ||||| || || || | ||| ||||| || | ||||| |||||| || |||||| Sbjct 85410 TAAAATTGGCAAAACATGTGGCAAGGTGGTAATGCCATTTCGTTGAGGTCTGCAGGGTTC 85469 Query 21174 CACGCGCACATAACGATGCGCCGATC 21199 ||||| ||| | ||||| || || Sbjct 85470 CACGCCGACAGGATAATGCGACGGTC 85495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427759514849760