Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20halstedii_20[genbank_20GCA_5F900000015.1_202015-11-18] 3,162 sequences; 75,321,785 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq252 96.9 2e-15 >seq252 Length=912309 Score = 96.9 bits (106), Expect = 2e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024 |||| || | || || || || || ||||| || |||||||| | || | |||||| | Sbjct 785584 CATCCTCAAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGTGGAATACCTTCCT 785643 Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084 |||| ||||||||| ||||| | ||| | || | || |||||||| | ||| | Sbjct 785644 TATCCTGAATTTTTTGCTTGACATTGTCAATGCTGTCAGAAGGTTCCACATCCAACGTGA 785703 Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 | || || ||||| |||||||||||||| || |||||| Sbjct 785704 TGGTCTTGCCGGTCAAAGTCTTCACAAAAATCTGCATG 785741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354763927979976